Xiphias gladius (swordfish): 120783806
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Entry
120783806 CDS
T07311
Name
(RefSeq) nuclear receptor ROR-alpha A-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120783806
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xgl03310
]
120783806
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120783806
Nuclear receptors [BR:
xgl03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
120783806
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Imm65
Motif
Other DBs
NCBI-GeneID:
120783806
NCBI-ProteinID:
XP_039973026
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Position
LG1:complement(34259576..34347115)
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AA seq
555 aa
AA seq
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MESSPQDSASDPGRSGSEPATPLTETPASLETLRGGEHLKSARRHSSSGSSSGSSGSGHG
KGLSAAVKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQK
NCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQQQQQ
QQQQQGPLLLSHPGLGSPSLAEAEPLSPHYGLSSTGLTELPDELGGYMEQNSPEGGSVSS
KADSGGEGGGGAFYLDIQPSPDQSGLDINGIKPEPLCDYGSSNGFFPYCSFSNRDPSPTV
SLAELDHLVQIISKSHLETCQYLREELQQMSRQNFQQDEVESYQSKPREAMWQLCAVKIT
EAIQYVVEFAKRIDGFMDLCQNDQIVLLKAGSLEVVFVRMCRVFDSQSNSVYFDGKFAGP
DVFKGLGCDDLISSVFDFAKSMCSLHLTEDELALFSAFVLLSADRSWLQEKLQVEKLQQK
TQLALQHVLQKNQREHGVLSKLRCKVSALRSLCSRHTEKLSAFRAVYPDIVQTHFPPLYK
ELFGADLELTLQTHE
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtccccgcaggattcggcgagcgacccgggcaggagcggctctgagcccgct
acaccgctcacagagacgccggcgagcctggagacactgcgaggcggggagcacctgaag
tcggccaggagacacagcagctccggctccagctccggctcctccggctccggccacggc
aaaggtttgtcagcagctgtgaagaagacacacacatctcagattgaaatcattccctgt
aagatctgtggagacaaatcatcggggatccactacggcgtgatcacctgcgagggctgt
aagggtttcttcagacggagtcagcagagtaacgccgcctactcctgtcctcgccagaaa
aactgtctgatcgaccgaacgagccgaaaccgctgccagcactgccgtctgcagaaatgt
ctggctgtgggcatgtcccgagatgcggtaaagttcggtcgcatgtccaagaagcagcgg
gacagtttgtacgctgaggttcagaagcaccgtctccagcagcagcagcagcagcagcag
cagcagcagcagcagggtcccctcctcctgtcccaccccggcctcggcagcccgagcctg
gcagaggctgagccactatccccccactatggcctctcctccaccggcctcacggagctc
cctgatgaactggggggctacatggagcagaactcccccgaaggaggatcagtgtcatcc
aaggcagactccggaggagaaggaggaggtggcgcgttctacctggacatccagccatct
ccggaccagtccggactggacattaacggcatcaaaccggagccactgtgcgactacggc
tcaagtaacggcttcttcccgtactgctccttcagcaacagagacccgtcgcccaccgtg
tccctggcagaactcgatcacctggtccagatcatctccaagtctcacctggagacgtgt
cagtacctgagggaggagctgcagcagatgagcaggcagaacttccagcaggatgaggtg
gagagctaccagagcaagccgcgggaggccatgtggcagctctgtgccgtaaagatcacc
gaggccatccagtatgtggtggagttcgccaaacgcatcgacggcttcatggacctctgc
cagaacgaccagatcgtgctgctgaaagccggttctctggaggtcgtcttcgtccgaatg
tgtcgggtgtttgactcgcagagcaacagcgtttacttcgacgggaaatttgcaggtcct
gacgtcttcaagggactgggttgtgatgatttgatctcgtcagtgtttgactttgctaag
agcatgtgttcactgcacctgacggaggacgagctcgctctcttctcagcattcgttctg
ctctctgcagaccggtcgtggctgcaggagaagctgcaggtggagaagctgcagcagaag
actcagctggctctgcaacacgtcctgcagaagaaccagagagagcatggagtgctgagc
aagctcagatgtaaggtttcagcgttgcgttcactgtgcagtcgacacacagagaaactg
tcagcgttcagagccgtttaccccgacatcgttcagacacacttccctcctctttacaag
gagctgtttggtgccgacctcgaactgacgctgcagacccacgagtaa
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