Xiphias gladius (swordfish): 120784098
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Entry
120784098 CDS
T07311
Symbol
tubb5
Name
(RefSeq) tubulin beta-5 chain isoform X1
KO
K07375
tubulin beta
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04145
Phagosome
xgl04540
Gap junction
xgl04814
Motor proteins
xgl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120784098 (tubb5)
09144 Cellular community - eukaryotes
04540 Gap junction
120784098 (tubb5)
09142 Cell motility
04814 Motor proteins
120784098 (tubb5)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120784098 (tubb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xgl03036
]
120784098 (tubb5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xgl04812
]
120784098 (tubb5)
04147 Exosome [BR:
xgl04147
]
120784098 (tubb5)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
120784098 (tubb5)
Cytoskeleton proteins [BR:
xgl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
120784098 (tubb5)
Exosome [BR:
xgl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120784098 (tubb5)
Exosomal proteins of colorectal cancer cells
120784098 (tubb5)
Exosomal proteins of bladder cancer cells
120784098 (tubb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
120784098
NCBI-ProteinID:
XP_039973510
LinkDB
All DBs
Position
LG22:19597579..19606326
Genome browser
AA seq
444 aa
AA seq
DB search
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEEDA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaatcgtgcacatccaggccggccagtgcggtaaccagatcggtgccaagttc
tgggaagtgatcagcgatgagcacggcatcgatcccacagggacttaccacggagacagt
gacttgcagcttgacaggatcagtgtttactataatgaggccacaggaggtaaatatgtg
cctcgggccattttggtggacttggagcctggcaccatggactctgtgaggtctggaccc
tttgggcaaatcttcagacctgacaactttgtgttcggtcaaagcggtgctggaaacaac
tgggccaagggtcactacacagaaggagctgagttggtggactcagtcctggatgtggtc
cgcaaagagtcagaaagctgtgactgtttgcagggcttccagctcacccactcgcttggt
ggtggaactggatccggtatgggaaccctgctcatcagcaagatccgtgaggagtacccc
gatcgtatcatgaacaccttcagtgtggtgccttcccccaaggtttccgacacagtggtt
gagccttacaatgctaccctgtcagtccaccagcttgtagaaaacacagatgaaacctac
tgcattgacaacgaagctctttacgacatctgcttccgcactctcaaactgaccacaccc
acctacggagaccttaaccacctggtgtctgctaccatgagtggggtcacgacctgcctg
cgtttccctggtcagctcaatgctgatctccgaaaattggctgtcaacatggtgcctttc
ccccgtttgcacttcttcatgcctggctttgcccccctgaccagcaggggcagccagcag
taccgtgccctcacagttccagagctcacccagcaggtgttcgatgccaagaatatgatg
gccgcatgcgacccacgtcacggccgctatctgactgtcgccgctgtgttccgtggccgc
atgtccatgaaggaggttgacgagcagatgctcaacgtgcagaacaagaacagcagttac
ttcgtcgaatggattcccaacaacgtcaaaaccgctgtctgtgacattccaccccgtggc
ctcaagatggccgtcactttcattggcaacagcacagccatccaggagctgttcaagcgc
atctccgagcagttcacagccatgttccgtcgtaaggccttcttgcactggtacacaggt
gaaggtatggatgaaatggagttcactgaagcagagagcaacatgaatgatctggtgtct
gagtaccagcagtaccaggatgccactgctgaggaagagggtgaatttgaggaggaggct
gaagaggatgcttga
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