Xiphias gladius (swordfish): 120784362
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Entry
120784362 CDS
T07311
Symbol
col28a1b
Name
(RefSeq) collagen, type XXVIII, alpha 1b
KO
K23619
collagen type XXVIII alpha
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xgl01002
]
120784362 (col28a1b)
Peptidases and inhibitors [BR:
xgl01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
120784362 (col28a1b)
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
DUF1194
Motif
Other DBs
NCBI-GeneID:
120784362
NCBI-ProteinID:
XP_039974051
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Position
LG22
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AA seq
1210 aa
AA seq
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MEMLLRGNLRRGVGFCLLLLALVHEAAGQRRKTGRRNNYRLHDDGGNVRLKFWWFPCPTG
LPCSLEVAFILDSSESAKIFLFEKQKAFVLSFSTRLAMLQVAGWTLKVQMAALQYSSSVS
IEHRFSAWTDLDSFHSQVSNMNYIGHGTYTTYAITNASQLLVQETPADSVRVVVLMTDGV
DHPRNPDVIAAAAEAKGHGTKFFAVGLSDIAQQSQNNAKLRAIASTPAQQFVQSLLDTQL
EEKLLKEMAAVASEGCPQTQVCLCERGERGPPGSPGRKGDPGFRGPPGLKGARGVPGANG
RPGGDGPEGHPGYKGNKGERGDCGTPGEKGETGLGGPPGPRGSQGERGSVGPPGDMGPEG
PAGPKGDRGPNGVPGPQGEIGIGFPGTKGEKGIQGRPGPTGPVGIGEPGLPGPPGPSGAQ
GNPGQPGEGFPGPKGDRGYEGPRGNRGLPGVGVKGDKGSLGPPGIPGPVGVPGTGLQGEK
GDQGPIGPSGPRGAPGIGIAGPKGNQGVTGEPGLPGERGVGEPGPKGDPGSEGLPGIPGQ
PGEDGVPGQKGDLGLPGLRGPDGAPGKGVPGGKGDRGDRGTRGLPGAVGPVGPVGPKGEQ
GNMGPPGTTGSPGRGIPGAKGEPGPKGPAGAVGEPGTGLTGPKGDRGSPGPAGQSGLKGE
GFTGPPGLRGPPGVTGETGPEGVGLPGPKGDRGLPGPPGPAGPPGIGLIGPKGLAGQLGP
TGPQGLPGEGIQGEKGEPGFQGISGPRGPPGQGLQGDKGDRGFRGEKGKKGDRGEHGEPG
TIGPLGRVGQKGEPGLTREEVIKIVRSICSCGVTCRQTPLELVFVIDSSESVGPENFYVI
KDFVNALIDRASVSRDTTRVGVVLYSHINMVVVSLGQEAARDEIKSAVRSMAYLGEGTFT
GSAIQQANQVFKAARAGVRKVAIIITDGQADKRDSVSLERAVAEAQGSNIEMFVIGVVNK
SDPLYEEFKRELNLMASDPDSDHVYLIDEFKTLPALERQLLSRICEDGERHLFSSIPSSR
LPPGISEVSGNARETPYRTDTDTPTFTGDFRKVQIVPGPPAPDLEREPITPQRTKPDDRT
STETQRFPFFDWGPFRPVTEFLPQSEVKKPSHHMVMTGANGPAAPTPRAPPEERTPSPYP
PTPPLLPSDAYVSAEQCSQTLDPGPCRDYVVKWYYDATANSCAQFWFGGCLGNSNRFETE
KSCKETCVKA
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgttgctgaggggaaacctgaggagaggagtggggttttgccttctgctgctg
gctctcgtacacgaggccgcgggccagaggagaaagacagggcgcaggaacaactacagg
ctgcatgacgatggaggaaatgtccgcctgaagttttggtggtttccttgtcccacaggt
ttgccgtgttccctggaggtggccttcatcctggacagctctgagagtgcaaaaatattc
ctgtttgagaagcagaaggccttcgtcttgagcttcagcacacggctcgccatgctgcag
gtagctggctggacgctgaaggtccaaatggctgcacttcagtacagcagctctgtgtcc
atagagcaccgattctcagcctggacagacctggattcattccacagtcaagtaagcaac
atgaactacatcggccacggcacctacaccacctacgccatcaccaatgcctcacagctg
ctggtacaggagacgccggcagacagcgtcagggttgtagtgctgatgacagatggggtc
gaccatccccgcaacccggatgtgattgcagctgcggcggaggccaaaggtcatggcaca
aagttctttgctgtggggttatcggacatcgcccagcagagtcagaataacgccaagctc
cgggccattgccagcacgcccgctcagcagtttgtccaaagtcttcttgatactcagctg
gaagagaagctgctcaaagagatggctgctgtcgcatcggaagggtgtccacaaacccaa
gtttgtttgtgtgaaagaggagagagaggccctccgggaagtccaggtagaaaaggagac
ccaggcttcagagggccacctggtctaaaaggagcgaggggggtgcctggtgcgaatggt
cgacctggaggtgatggcccagagggtcatccaggttacaagggcaacaagggggagaga
ggagactgtggcactccaggggaaaagggtgaaactggtcttggcggacctccaggccca
cgaggctcacaaggagaacggggttcagttggaccaccaggagacatgggtcctgaaggc
ccagcaggacctaaaggagacagaggacccaatggggttcctggaccgcagggggaaatt
ggcattggattccccggaaccaagggtgaaaaaggtattcagggaagaccaggtcccaca
ggtcctgttgggataggagaaccaggattaccaggtcccccaggaccatctggagcacaa
ggaaaccccggacaacctggagaagggtttccaggaccgaagggtgatcgtggatacgaa
ggtccaaggggcaatcgtgggcttcctggtgttggggtcaaaggtgacaagggcagtctt
ggaccacctgggattcccggaccagttggtgttcctggtacaggacttcaaggagaaaag
ggtgaccaaggcccaattggaccgtcaggacccagaggagctccaggtatcggaatagca
ggacctaaggggaatcagggcgtcacaggtgagcctggactgccaggtgagagaggagtg
ggagaaccaggacccaaaggtgacccagggtccgaggggttaccagggatacctggtcaa
ccaggagaggacggagtcccgggacaaaagggtgaccttgggttaccgggtctaaggggt
cctgacggggctcctggtaaaggcgtccctggagggaagggagacagaggggacaggggg
accagaggcctgcccggtgcagttggtcccgtggggccagtgggccccaagggggaacaa
ggaaatatggggccaccaggtaccaccggatcaccagggaggggtattcctggtgccaag
ggagaaccgggtccaaaaggtccggctggagctgtgggagagccggggacgggtttaact
gggcctaagggggacagagggtcgccaggacctgctggtcaatctgggctgaaaggtgaa
ggtttcactggccctccaggacttcgggggcctcctggggtcaccggagagaccggacca
gaaggtgttggcttacctggaccaaagggtgacagaggcttacccggacctcccgggcct
gcagggccaccaggaatcggtctgattggtccaaagggtttggcgggtcaattgggacca
accggtccacagggtttacccggagagggcatccaaggagaaaagggggagcctggattt
caggggatctccggccccagaggccctccgggacaaggtctgcagggggacaagggggac
cgagggttcagaggtgagaagggaaaaaagggagacagaggagaacacggagagccagga
accatcggacccttgggtagagtgggacagaagggagagcctggacttacaagggaggaa
gtcatcaaaatagtgagatccatatgcagctgtggagtgacctgccgccaaacccccttg
gagctcgtttttgtgattgacagctcggagagcgtcggccccgaaaacttctacgtgatc
aaggactttgtgaacgccctgatcgaccgagcctcagtcagccgagacaccacgcgggtc
ggcgtggtcctctacagccacatcaacatggtggtggtcagcctcggacaggaggccgcc
cgtgatgagatcaagtctgcggtgcgctccatggcctacctgggcgagggtacgttcacc
ggcagcgccatccaacaggccaaccaggtgttcaaggcggcgcgggcgggcgtgaggaag
gtggccatcatcatcacagacgggcaggctgataagagggactcggtcagtctggagcgc
gcggtggcagaagctcagggaagcaacatcgagatgtttgtgatcggcgtggtgaacaag
agtgatcccctgtatgaggagttcaagcgggagctcaacctcatggcctctgaccccgac
agcgaccacgtgtacctgattgatgaattcaaaacacttccagctctcgaaagacaactg
ctgagtcgcatctgtgaagacggagagaggcatctgttcagctccatccccagctccagg
ctcccgccgggaatctccgaggtctccggtaacgctcgggaaaccccgtacaggacggac
acagacactcccaccttcacgggagacttcaggaaggttcagatcgtgcccggccctcca
gcccccgacctcgaaagggaacccatcactcctcagagaaccaagccggacgacagaacc
tccacagaaactcagaggttcccgttcttcgactgggggcccttcaggcccgtaacagag
ttccttccacagtctgaggtgaagaaaccctcgcaccacatggtgatgaccggagccaac
gggccagctgctcccacgccgagggccccgcctgaggagaggacgccgtcgccgtatcca
ccgactcccccgctgctgccctctgacgcctacgtatcagccgagcagtgcagccagacc
ctggacccaggaccgtgccgcgactacgtggtgaagtggtactacgatgccacggccaac
tcctgcgctcagttctggttcggaggctgtctaggaaacagcaaccggttcgagactgag
aagagctgcaaggaaacctgcgtcaaggcctag
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