Xiphias gladius (swordfish): 120784431
Help
Entry
120784431 CDS
T07311
Symbol
thbs3a
Name
(RefSeq) thrombospondin-3a
KO
K04659
thrombospondin 2/3/4/5
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04145
Phagosome
xgl04510
Focal adhesion
xgl04512
ECM-receptor interaction
xgl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120784431 (thbs3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120784431 (thbs3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
120784431 (thbs3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120784431 (thbs3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120784431 (thbs3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xgl04147
]
120784431 (thbs3a)
00536 Glycosaminoglycan binding proteins [BR:
xgl00536
]
120784431 (thbs3a)
Membrane trafficking [BR:
xgl04131
]
Endocytosis
Phagocytosis
Opsonins
120784431 (thbs3a)
Exosome [BR:
xgl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120784431 (thbs3a)
Exosomal proteins of colorectal cancer cells
120784431 (thbs3a)
Exosomal proteins of bladder cancer cells
120784431 (thbs3a)
Glycosaminoglycan binding proteins [BR:
xgl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120784431 (thbs3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF_MSP1_1
EGF
Motif
Other DBs
NCBI-GeneID:
120784431
NCBI-ProteinID:
XP_039974194
LinkDB
All DBs
Position
LG22:29985876..30020493
Genome browser
AA seq
951 aa
AA seq
DB search
MDWRVPVLLSVIWVQLTAGVPDGPDVQVIDVLSLQDSRQSIAAVEKLTGSLSALSDVYVV
STLRLPPKLGGVLFGVYSKQDNRKYLELAVMGKINKVLVRYVRADGKLHTVNLQNANLAD
GRTHSIILRIGGLRRENMNMELYVNCRLADSSQGLPPLVPLPREADMVEVRHGQKAYARL
QGAVESLRLALGGSVAKAGALTDCPFQGDSSAYNSVSGEVNSILGDHTKALIGQLIIFNQ
ILGELRQDIREQVKEMALIRNTILECQVCGFHEPRSRCSPNPCYKGVSCMESLQYPGYTC
GPCPPGTTGNGTHCQDIDECELQPCFSPEACVNTVGGFSCQSCPPGLWGAPLAGTGLDYA
KTHKQDCVDIDECIDLPDACVSNSVCINTVGSYKCGSCKPGFLGNQTSGCFPRKSCAALT
FNPCDTNAHCTMERSGEVSCRCNVGWAGNGNTCGTDTDIDGYPDRSLPCMDNDKHCKQDN
CVFTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLVPNKDQQNSDSDSFGDACDNC
PNVPNSDQTDTDNNGQGDACDQDIDGDGIPNVLDNCPKVPNPMQTDRDRDGVGDACDSCP
ELSNPMQTDIDNDLVGDVCDTNQDTDGDGHQDSRDNCPDIPNSSQLDSDNDGLGDDCDHD
DDNDGVLDDYDNCRLIVNPNQKDSDMNGVGDVCENDFDNDAVADLIDACPESAEVTLTDF
RAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTV
TDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQSIPFRAMAQPALQLKAVKSRTGPGEFLR
NALWHTGDTPGEVKLLWRDPRNIGWKDKTSYRWQLSHRPQVGYIRVKLYEGTDIVADSGV
VIDSTMRGGRLGVFCFSQENIIWSNLRYRCNDTVPEDFQYHRKQILMHIQV
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggactggagagtcccggttctgctgtcagtcatctgggttcagctcactgcgggagtc
ccggacggaccggacgttcaagtgattgacgtgttgagtcttcaggactccaggcagagc
atagcggcagtggagaagctgactggcagtctgagcgcgctcagtgacgtgtatgtggtg
tcgacgttgcggctaccgccgaagctgggcggagtcctgttcggtgtctacagcaaacag
gacaacaggaagtacttggagctcgccgtcatggggaagatcaataaagtcctggttcgt
tacgtcagagctgatgggaagctccacaccgtcaacctgcagaacgctaacctggctgac
gggcggactcactccatcatcctgagaatcggaggtcttcgtcgtgagaacatgaacatg
gagctctacgtcaactgccgattggccgactccagccagggcctcccgccactggtccct
ctgcccagagaggcagatatggtggaggtcaggcacggacagaaggcctacgcccgacta
cagggtgcagtggagtccctcagactggctctaggaggcagtgttgccaaagcaggagct
ctgactgactgtccgttccaaggagactcctcagcctataactcagtgagtggggaggtc
aactccatcctgggtgatcacaccaaggctctgattggtcagctcatcatcttcaaccag
atcctgggagagctgcgacaggacatcagagaacaggtgaaggagatggccctgatcaga
aacaccatcctggagtgtcaggtttgtggtttccatgagcctcgttcccgctgctctccc
aacccctgttacaaaggtgtgtcctgcatggagagtctgcagtatcctgggtacacctgt
ggaccctgtccgcctggaaccacgggcaacgggacgcactgtcaggacatcgacgagtgt
gagctgcagccttgtttctctcctgaagcctgtgtaaacacggtgggggggttcagctgt
cagtcctgtcctcctggcctgtggggggcgccgctggctggaaccggactggactacgct
aagacacacaaacaggactgtgtagatattgatgagtgtatagatctacctgatgcctgt
gtatcaaactctgtctgcatcaacactgtgggttcatataagtgtggcagctgtaaacct
ggtttcctcggtaaccagacatcaggttgcttccccaggaagtcgtgtgctgcgttgacc
tttaacccttgcgacaccaatgcccactgcaccatggagaggagcggggaggtttcctgc
aggtgtaatgtgggttgggcaggaaatggtaacacatgtggaacggacacggacattgat
gggtatccagatcgctctctgccctgcatggacaacgacaaacactgcaaacaggacaac
tgtgttttcactccaaactccggtcaggaggacgccgacaacgacgggatcggagatcag
tgtgacgaggacgcggacggagacggcatcaaaaatgtggaggataactgccgattggtc
cctaacaaagaccagcagaactcagacagcgactcctttggtgatgcctgtgataactgt
cccaacgtccccaacagcgatcagacagacactgacaacaatggacagggagatgcctgt
gaccaggacattgacggagacggtattcccaacgttcttgataactgtccgaaggtaccg
aacccaatgcagacagacagagacagagacggagtgggagacgcctgtgacagctgtcct
gagctcagcaaccccatgcagacggacattgacaacgacctggtgggagacgtttgtgac
accaatcaggacacggacggagacggtcaccaggacagcagagacaactgtccagacatc
cccaacagctcccagctggactctgataacgacggcctcggagacgactgtgaccatgac
gacgacaacgatggtgtcctcgacgactacgacaactgccgactcatcgtcaaccccaac
cagaaagactccgacatgaacggcgttggagatgtctgtgagaacgacttcgataatgac
gccgtggcggatttgattgatgcgtgtccagagagcgctgaggtcactctgacagacttc
agagcctatcagaccgtcatcctggacccagagggagacgcccagatcgaccccaactgg
gtggtgctgaatcagggaatggagatcgtccagacgatgaacagtgatcctggtctagct
gtgggctacacggcgtttaacggtgtcgactttgagggaacgtttcacgtcaacacggtg
acggatgacgactacgccggcttcattttcggttatcaggactcctcgagtttctacgtg
gtgatgtggaaacagacggagcagacgtactggcagtccatccccttcagagccatggcc
cagcccgccctgcagctcaaggcggtgaagtctcggaccgggccaggtgagtttctgagg
aacgctctatggcacacaggggacacacctggagaggtgaagctgctctggagggaccca
cgaaacatcggctggaaggacaaaacctcgtaccgctggcagctgagccaccggccgcag
gtcggatacatcagggtgaagctgtatgaggggaccgacatagtggccgactctggcgtt
gtgatcgacagcacgatgagaggaggcaggctcggcgtcttctgcttctcccaggaaaac
atcatctggtccaacctgcgctacagatgtaacgacacggtgcctgaagacttccagtat
catcgtaaacaaattctgatgcatattcaggtctga
DBGET
integrated database retrieval system
