Xiphias gladius (swordfish): 120784464
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Entry
120784464 CDS
T07311
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xgl03016
]
120784464 (cdkal1)
Enzymes [BR:
xgl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
120784464 (cdkal1)
Transfer RNA biogenesis [BR:
xgl03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
120784464 (cdkal1)
Prokaryotic type
Methylthiotransferases
120784464 (cdkal1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
120784464
NCBI-ProteinID:
XP_039974244
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Position
LG22:complement(12407166..12645761)
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AA seq
564 aa
AA seq
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MASACDSLIEDIEDMVSSSDPTPHERQSARKSIIPRSRKKKELLSNEELHADSLIPGTQK
IWMKTWGCSHNNSDGEYMAGQLAASGYKMTDDPTEADLWLLNSCTVKNPAEDHFRNSIKK
AQEQQKKVVVAGCVPQAQPRMEYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GRRLGGARLDLPKIRRNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWRLVEEIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHVPVQSASDSVLMDMKREYCIDDFKRVVDFLKERVPGITIATDIICG
FPGETEENFQETIDLVKCYRFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKELSHLFH
SYDPYNHKVGERQHVLVTEESFDAQYYVAHNKFYEQVLVPKRAEFKGKMIEVDIYEAGKH
FLRGRPVEDSEPFTPSIAQPLQKGEVSGLMQEQIANGIQGPASTPSSSVLSIGSYGLDRE
VVKKLGIGLTLAAAILAFIVEKLF
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgcctgtgactctctgattgaagacattgaggacatggtgtcttctagtgac
cccactcctcacgagagacagtctgctagaaagagtatcataccgaggtccaggaagaaa
aaagagcttctgagcaatgaggagctccatgctgacagtttgatccctggcacccaaaag
atctggatgaaaacgtggggctgcagccataacaactctgatggagagtacatggctgga
cagctagcagccagcggatacaagatgactgatgacccaacagaagcagacctgtggctg
ctcaacagctgcactgtgaaaaaccctgcagaggaccacttcagaaactcaatcaaaaaa
gcccaggaacagcagaaaaaggtggtagtagcaggttgtgttccccaggcccagccacgg
atggaatacctcaaaggactcagcatcattggggtccagcagattgatcgagtggtggaa
gtagtggacgaggctgttaaaggccactcagttcgcctattgggtcagaagaaagatgga
ggccggaggctcgggggagctagactggacctgcccaagatcaggaggaaccctctcatt
gaaatcatctccattaacactgggtgtctgaatgcatgtacctactgtaagactaagcat
gccagaggcgacctggccagctatcccattgaggagctagtagagagagccaggcagtca
ttccaggagggagtgtgtgagatctggttgaccagtgaagacacaggagcttatggtaga
gacatagggacagaccttcccacattgctatggagattggtggaggagattcctgaagga
gccatgctgaggctgggtatgaccaacccaccatatatcctggaacacttagaggagatg
gctaagatattgaatcatcctcgtgtctatgccttccttcatgttcctgtgcagtcggcc
tcagacagtgtactgatggacatgaagagagaatattgcattgatgacttcaagagagtg
gtggacttcctcaaagagagggtcccaggtataaccatcgcaacagatataatctgcggt
tttcctggggagacagaggaaaacttccaagagacaatagacttggtgaaatgctaccga
ttccccagtctcttcatcaaccagttctaccccagacctggtacacctgccgccaagatg
gagcaagtaccagcacatgtgaagaagcagaggactaaagaactttcacatctcttccac
tcttacgacccttacaaccacaaggtaggggagaggcaacatgtgttggtgacagaggag
tcatttgatgcccagtactacgtggctcacaacaagttctacgaacaggtgctggtacct
aagagggcagagttcaaagggaagatgattgaggtggacatctacgaggcaggaaaacac
ttcctaagaggccggccagtagaagacagtgagccgttcactccctccattgctcaacca
cttcagaaaggagaggtgtctggcctgatgcaggaacagattgcaaatggcatccaaggt
cctgcttctacgccctcttcttccgttttgtcgatcggctcttatggtctagacagggaa
gtagtgaagaagctggggatcgggctcactctggctgcagctatcttggcctttatcgtg
gagaaactgttctga
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