Xiphias gladius (swordfish): 120784482
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Entry
120784482 CDS
T07311
Symbol
nr1d2a
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2a isoform X1
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120784482 (nr1d2a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xgl03310
]
120784482 (nr1d2a)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120784482 (nr1d2a)
Nuclear receptors [BR:
xgl03310
]
1. Thyroid hormone like
1D. Rev-Erb
120784482 (nr1d2a)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
120784482
NCBI-ProteinID:
XP_039974267
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Position
LG22:25461910..25469116
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AA seq
597 aa
AA seq
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MPEDVGTAKPGGVIAYISSGSASSPESCMGSSPSSGYLSTSPTLSRPLLPSRAVGMVVDI
APPAKSGHPRGHGTEKAGRSSTSAKSSITKINGMVLLCKVCGDVASGFHYGVHACEGCKG
FFRRSIQQNIQYKKCLKMENCTIMRINRNRCQQCRFKKCLAVGMSRDAVRFGRIPKREKQ
RMLLEMQNAMNNMMSNNSQLHSILHGHQSPPLPMEAMASDASSSPSSSSCSASDSPSCSS
PSSPQCPQDSESVVSMDTNSSSASSCASDSGEDEAIVATSRQHQDALAFGQQPSPVTVAL
ETRCDTRLEEHQESWNCWNNNAVAGGCQRSLYSNSQHVTNTGYREERGVYHQQQPQPQLS
SSPGCEPSEDSQRQHEFNTQTASSGFNGPTSCVNSRAHLVCPMNTSPYVDPHKPSQEIWE
EFSMSFTPAVREVVEFAKRIPGFRDLPEHDQVSLLKAGTFEVLMVRFASLFNVVERTVTF
LSGKRYSLDTLRSLGAGELLNSMCEFSEKLAALRLDADEMSLFTAVVLVSADRSGIQDLN
SVEALQDKLIRALRNLVMQNHDDEAATTFTKLLLKLPELRSLNNMHSEELLSFKVHP
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaggacgttgggacggccaaacccggaggcgtgattgcctatatctcctctggc
tccgcctccagcccagagtcctgtatgggcagcagccccagcagcggctacctgtcgaca
tcacccactctgtcccgccccttgctgcccagcagggctgtgggcatggtggtggacatc
gctccgccggccaagagcgggcacccgcgcggccacggcacggagaaggccgggcgatcc
tccacgtctgccaagagcagcatcaccaaaatcaacggcatggtgctgttgtgcaaggtg
tgcggcgatgtggcctcgggcttccactatggcgtgcacgcttgtgagggctgcaagggt
tttttcaggagaagcatccagcagaatatccagtacaagaagtgtcttaagatggagaac
tgcaccatcatgcggatcaacaggaaccgctgccagcagtgtcggttcaagaagtgtctg
gctgtcggcatgtcccgagatgctgtccggtttggccgcatcccaaagagggaaaagcag
aggatgctgctagagatgcagaacgccatgaacaacatgatgagcaacaacagccagctg
cacagcatcctgcacggccaccagagccccccgctgcccatggaggccatggccagcgat
gccagctcctcgccctcctcttcctcctgctctgcttccgattccccgtcatgctccagc
ccctcctcgccgcagtgcccccaggactcagagtcggtggtttccatggacaccaactcc
agctccgcctcgtcctgcgcatcggacagcggcgaggacgaggccatcgtcgccacgagc
aggcagcaccaagacgccctcgcgttcggccagcagccctcgccggtcacagtcgccctg
gagaccaggtgtgacacccgcctggaggagcatcaggagagctggaactgctggaacaac
aatgcagttgcgggaggctgccagcgcagtctctacagcaacagccaacacgtcaccaac
actggttatagggaggagaggggagtctaccaccagcagcagccgcagccgcagctcagc
agctcccctggctgtgaaccatcagaagacagccaaagacagcatgaatttaacacacaa
actgcctcaagtggtttcaatggaccaaccagctgtgtgaatagtagagcacacttggtc
tgtccgatgaacacctcgccctacgtggacccccacaagccaagccaggagatctgggag
gagttctccatgagcttcacgcccgccgtgcgggaggtggtcgagttcgccaagaggatc
ccgggcttccgcgacctccccgagcacgaccaagtcagcctcctgaaagccggaacgttc
gaggtgctgatggtccggttcgcctctctgttcaacgtggtggagcggacggtgaccttc
ctgagtggcaagcgctacagcctcgacacgctgcgctcgctgggcgccggcgagctgctc
aactccatgtgcgagttcagcgagaagctggcggcgctgcggctcgacgccgatgaaatg
agcctcttcactgccgtggtgctcgtctcagccgatcgctcagggatccaggacctgaac
tcggtggaggccctgcaggacaaactgatccgggcgctgcgaaacctggttatgcagaac
cacgacgacgaggccgccaccaccttcaccaagctgctgctcaagcttcccgagctgcgt
tccctcaacaacatgcactcggaggaactgctgtccttcaaagtgcacccctga
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