Xiphias gladius (swordfish): 120784635
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Entry
120784635 CDS
T07311
Symbol
snx27b
Name
(RefSeq) sorting nexin-27b isoform X1
KO
K17936
sorting nexin-27
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120784635 (snx27b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xgl04990
]
120784635 (snx27b)
Membrane trafficking [BR:
xgl04131
]
Protein recycling
Others
Others
120784635 (snx27b)
Domain-containing proteins not elsewhere classified [BR:
xgl04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
120784635 (snx27b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
SNX17-31_F2_FERM
VirE3
PDZ_2
USP7_C2
SNX17_FERM_C
RA_3
Motif
Other DBs
NCBI-GeneID:
120784635
NCBI-ProteinID:
XP_039974525
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Position
LG22:17571748..17583240
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AA seq
571 aa
AA seq
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MADVEGQGICSSVPPLPHPSSRNGSGGGNTTPGTGGGCQMATTVTSGPRLVRIVKSDSGY
GFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGAT
HKQVVDLIRAGERELVLAVLPVPPQEADCLDPGDDGSAQSCYDYSDKQAVPISVPSYKHT
ELNQEKFVVYNVYMAGRQLCSKRYREFVILHQNLKREFANYTFPKLPGKWPFSLSEQQLD
ARRRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIAMPDKTTLTVRVRK
NSTTDQVYQAVVMKLGMDSVTASYFALFEVINHTFVRKLAPNEFPHKLYVQNYTSAIPGT
CLTLRKWLFTTEEEILLNDNQLAVNYFFHQAVDDVKKGFIKAEQKSYQLQKLAEQKKMSM
YLSLLRGCEGYNEIIFPHCSCDSRRKGHVITAISIHHFKLHACTEEGTLENQVIAFDWGE
MQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEATD
KDNKNCSKDEYFPAAEAQKGWRHLGREIVTS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcgagggacaaggaatttgttcatcggtccctccgttgcctcacccttcc
tcccggaacggctccggtggcggtaacactacgccgggcaccggcggcggctgccagatg
gcaaccaccgttacttcaggcccacggcttgttcggatagtgaagtctgactcgggctat
ggtttcaatgttcggggacaagtcagtgaaggagggcaactacggagcattaacggggaa
ctgtacgctccactgcagcatgttagtgctgttctaccgggaggtgccgccgacagagcc
ggtatttcgaagggggacaggattcttgaggttaatggagtgaatgtagagggagcgacc
cataaacaggtggtggacctgatcagggctggggagagggagcttgtgttggccgtgcta
cccgtcccaccccaggaggccgactgcttagatcccggggacgatggttcagctcagtcc
tgctacgactactccgacaagcaggctgtccccatctctgtgcctagctacaagcacact
gagctcaaccaggaaaagtttgtggtatataatgtgtacatggcaggcaggcagctgtgc
tccaagcgttaccgggagtttgtgatcctacaccaaaaccttaagcgggagtttgccaac
tatacattccccaagctgccggggaaatggcctttttccctgtcagagcagcaactggat
gcacgacgcagaggcttggaagaatacttggagaaagtgtgctctgtacgggtcattgga
gaaagtgacatcatgcaggagtttctgtctgaatcagatgagaactataatggcgtgtcg
gatgtggagttgagaatagccatgcccgataaaaccacgctcactgtcagagttcgcaaa
aactctaccacagaccaggtgtaccaggctgtggtaatgaaactagggatggacagtgta
actgccagctactttgccctgtttgaggtcatcaaccacaccttcgtgcgtaagcttgcc
ccgaacgagttcccccacaaactgtatgtacagaactatacctcagccatcccaggaacc
tgcctcaccctgcgcaagtggctctttaccacagaagaagagattctgctcaatgacaac
cagcttgctgtcaactacttttttcaccaggctgtggatgatgtgaagaaaggcttcatc
aaagcagagcagaagtcctatcagctgcaaaagctggcagaacagaagaagatgtctatg
tatctgagtttgttgaggggttgcgagggctacaatgagatcatattcccccactgttcc
tgtgactcccgacgtaaaggccacgtcatcacagccatcagcatccaccacttcaagctg
catgcctgcacagaggaagggacactcgagaaccaagtgattgcatttgactggggggag
atgcagaggtgggacacagatgaagagggcatggccttctgctttgaatatgcacgggga
gagaagaagccacgctgggtcaagatatttacaccatattttaactacatgcatgagtgc
ttcgagagagtcttctgtgagttgaagtggaggaaggaggtggaagaggaggctacagac
aaggacaataagaactgcagtaaagatgaatattttccagctgctgaggcacagaaggga
tggaggcacctaggaagggagattgttacctcttaa
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