Xiphias gladius (swordfish): 120784674
Help
Entry
120784674 CDS
T07311
Symbol
sox4b
Name
(RefSeq) transcription factor SOX-4b
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120784674 (sox4b)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120784674 (sox4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Coilin_N
Motif
Other DBs
NCBI-GeneID:
120784674
NCBI-ProteinID:
XP_039974590
LinkDB
All DBs
Position
LG22:complement(12318769..12323354)
Genome browser
AA seq
433 aa
AA seq
DB search
MVQKMSHTESTAEALSFFVGDSSSDSGACMDLDPAASPLSPGSTASSTAGDKLGDNPAWC
KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLRDSDKIPFIREA
ERLRLKHMADYPDYKYRPRKKVKSSASKPGSNGEKGEKVNSSSNNTSTKTSSSSRKNGSK
SPISSKPHKSLFGSSSSSTKASPFASEHPSEHHHNSLYKSRSGSSAAKQIPDSKKPKRVY
VFGSSAASLSVSPTSSLVVPASPTLSSSADSSDPLSLYEDAGSGKEEGAESPGGVSSSSS
SRSSSSSSSSSSSSSLGGSSERHGGHTYSSRRASSPTPSGSHSSASSHSSSSSSSEDEEF
EDDLLDINPSPSFDSMSLGSFGSSVLDRDLDLNFESGSGGSHFEFPDYCTPEVSEMISGD
WLESTISNLVFTY
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagaaaatgagccacacggagagcaccgccgaggcgctgtcctttttcgtcggg
gattcgagctccgactccggggcgtgcatggatctggacccggccgcctcgcctctctcc
ccgggctccacagcttcttcgaccgccggcgacaagctgggagacaacccggcatggtgt
aagactccaagcggccacatcaagagacccatgaacgcctttatggtctggtcacagata
gagaggagaaagattatggagcagtctccggacatgcacaacgctgagatctccaaaagg
ctggggaagcgttggaagctgctcagagacagcgacaagatccccttcatcagagaggcg
gaacggctcaggctcaagcacatggcggactatcccgactacaagtaccggccgaggaag
aaggtaaaatcaagcgcctctaagcctggcagtaacggagagaagggagagaaagtcaac
agtagctcgaacaacaccagcactaagacatcctcatcttcgaggaagaatggatccaaa
tcccccatcagcagcaaaccccacaaatcacttttcgggagcagcagcagtagcaccaaa
gcatcaccgtttgcctctgagcacccatcagagcaccaccacaactctctctacaagtcg
agatctggctcttcggcggccaagcagataccagacagcaagaagcccaagcgggtttac
gtcttcgggagcagcgcggccagcctgagcgtcagccccacgtcctccctcgtggtcccg
gccagcccgactctcagcagctcggcggactccagcgatccgctcagcctgtatgaggac
gcgggcagcggcaaagaggagggagccgagtcccccggcggcgtcagcagcagcagcagt
agccgcagcagcagcagcagcagcagcagcagcagctccagcagcctgggcgggtcttcg
gagcgccacggcgggcacacatacagcagtcggcgggcttcctcgccgactccctccggc
tctcactcctccgcctcgtcccactcgtcctcctcctcttcctcggaggacgaggagttc
gaggacgacttgctcgacattaacccgagccccagctttgatagcatgtcgctggggagc
tttggctcctcggtgctggacagggacttggatttgaactttgaatccggctccgggggc
tcccacttcgagttccccgactactgcacgcccgaagtcagcgagatgatctccggggac
tggctggagtccaccatctccaacttggtgttcacgtactga
DBGET
integrated database retrieval system
