Xiphias gladius (swordfish): 120784705
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Entry
120784705 CDS
T07311
Name
(RefSeq) DENN domain-containing protein 4B-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120784705
Membrane trafficking [BR:
xgl04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120784705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
SPA
Motif
Other DBs
NCBI-GeneID:
120784705
NCBI-ProteinID:
XP_039974649
LinkDB
All DBs
Position
LG22:28938936..28998291
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AA seq
1533 aa
AA seq
DB search
MRGATDSSDNSLGGQTGGMTEEKCPQLVDYFVVAGLDPAGPWRPLDEDGKTSTFSSSSSS
SSSSSSSSGRAVEPVTDLAVIAKGLGEEVPEGFTCIERTLGGHSAELSAGLINNPHLYLC
YRRGRDKPPILDLGALYEGKEQLKQGWYVIETTPYSRSASLSSGGGPTAHRVFLTYRRAL
DSQGLHTLGVTDIALLIPSKGEVAPHTFCRVDKNLNTGMWGPALYVCYKRAVAKANALVY
EASLISRYPEEDLEAFPLPESVPVFCLPMGVTVESWPLNTKYQLPVFSTFVLTSASGDKV
YGAAIQFYESFPRELLSERQSVRLGLLSVVDRRPITNRSLQVKKSICVLSHWPFFTVFQK
FLTFVYRYSISGPHVLPLEKHISSFMHNVPFPSPQRPRILVQLSPYDNLLLCQPVSSPLP
LSGASFLKLLQNLGPENACTLLLAVLTEHKLLLHSLRPDVLTSVSEALVSMSFPLRWLCP
YIPLCPLQMADVLLAPMPFIVGVHSSYFDLYDPPTDVVCVDLDTNTIFQSEDKKPLSWRS
LPRKQGKTLFNTLSNLHKTLEKICTPGQEEATLEFLLTDYDQIYRRQKQLELEIQEVFLR
FMSCLLRGYRTFLLPITQAPSDTTTDCSSLFNLQGFLKSRDRTQQKFYNQLTRTQMFTQF
IEECSFVSDRHACLEFFDECVQKVDVEKPEEVRLIDLDETHSGEHTVFIMPPEEPQEPDG
SECPALYSYETFPTLKPELFDQPQDQLRVPAKGSAPSSPAPRRTKQEIKLAQKRAQKYAA
VPDMWSKCLLGHCYGLWFIYLPTFVRAESAKVRALHTAYDVLKHMENRKVVLPDEVCYRI
LMQLCGQYGQPVLAVRVLLEMKKAGITPNTITYGYYNKAVLESKWPSTNQGGRLRWAKLR
NVLLAVAQFRQPIKRRQKSGSVGSRGEATMDPDQRLRPHSTLIRQSSWSGLSESSSHESL
TGPLVKSSSLNSMKTSTDKVKLCKKTLFRNTGTNGCSDTVSRKPPLGLKGTYTPPPAPPG
AVLVRRSQVCLSNFYKEYAESADSEPDCSCEPAERDGRPVGVRDTAGRNKAVDENYNDVS
SPSRGGLAGKLQQLLTPTRHRVSVRRAASVDDRRPGGGGIGRRVSDQRQSRKAQVAETLL
KAKDRLVNATSESSLSVGSDLDLTDIPSPAYPLRRSWDANQEGAGLEVLMSSCSLCRSCN
SLVYDEEIMAGWTSDDSNLNSSCPFCCASFVPFLNAEICDLGPVGSAERSNWNLEDEVES
AVRPPSGHEASLRHQCNGLSEDSSSETSSYSENSRTTTGSSLGGAPQVTVAYLSPLVLRK
ELESLLENEGEAVLAQPQFLDSHSIIFWNLVWYFQRLCLPSNLLQLVRASPLVSQFTQSE
SSAVRVRLLWDTLTPDTDQWPPLYILWRIHSGVPMRSYSWRRHNHPFTLSFLEEVLRWVG
MNEVHKAVTLFLDTLAKQPGSPRIQRSLYREFLFLTLAAMGKDHVAAFDKKYKVAYSRLS
STLGREDLRKKRAQPPSPKAIDCRRSFHPPLEC
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atgaggggagctacagattcatctgataattctcttggagggcagacaggcggcatgaca
gaggagaaatgtccccagctggtggactactttgtagtggcgggtctcgaccctgcgggg
ccctggaggcccctggatgaggatggaaagacctccaccttctcctcctcctcgagttcc
tcctcctcttcgtcatcttcgtcgggccgggcggtggagccggtcacagacctggcggtg
atcgccaaggggctcggggaggaagtgccggagggcttcacctgcatcgagaggacgctg
ggcggacactcggccgagctgagcgccggcctcatcaacaacccacacctgtacctgtgc
taccgccgaggacgagacaaaccgcccatcctggacctgggggctctgtatgaggggaag
gagcagctgaagcagggctggtacgtcatcgagaccactccttacagccgttcggccagt
ctgagctctggcggcggcccgacggctcaccgggtgttcctgacctaccggcgggctctg
gactctcagggcctccacacgttgggcgtcactgacatcgccctgctgatacccagcaag
ggggaggtcgccccgcacacgttctgtcgcgtcgacaagaacctcaacaccggcatgtgg
ggtcctgccctgtatgtgtgctacaagagagccgtggccaaagccaacgccctggtctac
gaagccagtctgatcagccggtacccagaggaggacctggaggcgtttcctctgccggag
tcggtgccggtcttctgtctgcccatgggtgtcaccgtggagagctggcctctaaacaca
aagtaccagctgcccgtcttctccaccttcgtcctcacatccgcctccggggacaaggtt
tacggagcagccatccagttctacgagtccttccccagggagctgctgtcggagcggcag
agcgtgaggctcggcctgctcagcgtggtcgaccggcggccgatcaccaaccgcagcctg
caggtgaagaagagcatctgcgtcctctcccactggcccttcttcaccgtcttccagaag
tttctcacctttgtctacagatactccatctccggcccccacgtcctgccactcgaaaaa
cacatctccagcttcatgcacaacgtcccgtttccttcccctcagcggcctcgcatcctc
gttcagctctctccatatgacaacctgctgctctgccagccggtctcctctcctctccca
ctcagtggtgcaagcttcctgaagctgctgcagaaccttggcccagaaaacgcctgcacg
ctgctgctcgctgtcctcaccgaacacaaacttctgctgcattcgctccggcccgacgtc
ctcacctccgtcagcgaggccctcgtctcgatgagtttccccctgcgctggctctgtccc
tacatccctctgtgtccgctgcagatggccgacgtgctgctggcgccgatgcccttcatc
gtgggcgtccactccagctacttcgacctgtacgacccccctacagacgtggtgtgtgtc
gacctggacaccaacaccatcttccagtcagaggataagaagccgctctcatggcgatcg
ttgcccaggaagcagggcaagactctgttcaacaccctcagcaacctccacaagaccctg
gagaagatttgcacacccggccaggaggaggcgacgctggagttcctgctgaccgactac
gatcagatctacaggcgtcagaagcagctggagctggagatccaggaggtgtttctgcgc
ttcatgagctgcctgctgcgaggataccgcaccttcctgctgcccatcacgcaggctccg
tcggacaccaccaccgactgcagctccctgttcaacctgcagggtttcctgaagtctcgg
gatcgaacgcagcagaagttttacaaccagctgacgaggactcagatgttcactcagttt
attgaggagtgctccttcgtcagcgaccgtcacgcctgcctggagttcttcgacgagtgc
gtccaaaaggtggacgtggagaagccggaggaggtgaggctgatcgatctggatgagact
cacagtggagaacacacagtcttcatcatgcctcctgaagaaccgcaggaacctgacggg
tcagagtgccctgccctctacagttatgaaaccttccccaccttgaagccggagctcttc
gaccagccacaggaccagctccgtgtccccgctaaaggcagcgcccccagcagccctgcc
cctcgacgcacaaaacaggagattaagttggcccagaagcgggctcagaagtacgcggcg
gtcccggacatgtggtctaagtgcctgctgggtcactgttacggcctctggttcatctac
ctgcccaccttcgttcgagcggagagcgccaaggttcgcgccctgcacacggcctacgac
gtcctcaaacacatggagaaccgcaaggtggtgctgccggacgaggtgtgttaccggatc
ctgatgcagttgtgtggacagtacggccagccggtcctcgctgttcgagtcctgctggag
atgaagaaggcgggaatcacaccaaacaccatcacctatggatactacaacaaggcagtg
ctggagagcaagtggccctccaccaatcagggcggacgtctccgctgggccaagctgagg
aatgtcctgttggccgtggcccagttcaggcagccaatcaaacggcgtcagaagagcggc
tcggtggggtcgcggggagaagcgacgatggaccctgaccagaggctccgcccccactcc
actctgattcgtcagtccagttggagcggtctgtctgaaagctccagccacgagtcactg
accggcccactggtgaagagcagcagtctgaacagcatgaaaacgtccaccgacaaggtc
aaactctgtaagaagactctgttccgtaacactgggaccaacggctgcagtgacaccgtc
tcccgtaagccccccctgggactcaaaggcacctacaccccgcctccagcgccccccggt
gccgtcctggttcggcggagtcaggtctgcctttccaacttctacaaagagtatgcagag
tcggccgactcggagccggactgtagctgtgagcctgcagagagggacggcagacctgtg
ggggtgcgtgacacggccggcagaaacaaggccgtagacgagaactacaacgacgtctct
tcgccgagccgaggaggtctggcagggaaactccagcagctcctcacgccgaccagacac
cgcgtgtcggtgcgacgagccgccagcgtggacgaccggcggccgggaggaggagggatt
ggacgaagagtgtctgaccagagacagtccagaaaagctcaagtggctgaaacactgctg
aaagccaaggacaggctggtcaacgctacctcagagagttccttgtctgtgggaagtgac
ctcgacttgacggacatccccagtccagcgtatcctctgcgcaggtcctgggacgccaat
caggagggggcggggctggaggtgttgatgtccagctgctctctgtgtcgcagctgtaac
tcgttggtttacgacgaggagatcatggccggctggacgtcggacgactccaacctgaac
tcgtcctgcccgttctgctgcgcctccttcgtccccttcctgaacgctgagatctgtgac
ctgggacccgtcggcagcgcggagcgcagcaactggaacttggaggacgaggtggagagc
gcggtgaggccccccagtggtcacgaggcctccctgcggcaccagtgtaacggtctgagt
gaagactccagctctgagaccagcagctactcagagaacagcagaaccaccacgggttcg
tcgttgggtggggctcctcaggtgacggtggcttacctgagtcccctggttctgaggaag
gagctggagagtctgctggagaacgagggcgaggcggtcctggctcagcctcagttcctg
gacagccactccatcatcttctggaacctggtctggtacttccagcgcctctgtctgccc
agtaacctgctgcagctggtcagagcctcgccactggtcagccagttcacacagtcggag
agttcagcagtgagggtgaggctcctctgggacaccctgacccccgacacagaccagtgg
ccccccctctacatcctgtggaggatccacagcggcgtcccgatgagaagctacagctgg
cggagacacaaccacccgttcaccctgtccttcctggaggaggtgctgcgctgggtcggc
atgaacgaggtgcacaaagccgtcacgctcttcctggacacgctggccaaacagccggga
tcaccccgaatacagaggagtttgtacagagagttcctcttcctcacactggcagctatg
ggcaaagaccacgtcgctgcgttcgataagaagtacaaggtggcgtactctcggctcagc
agtactctgggtcgcgaggatctccgaaagaagcgagctcagccccccagccccaaagcc
atcgactgcagacggagcttccacccgccgctcgaatgctga
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