KEGG   Xiphias gladius (swordfish): 120784964
Entry
120784964         CDS       T07311                                 
Symbol
rnf4
Name
(RefSeq) RING finger protein 4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
xgl  Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xgl04121]
    120784964 (rnf4)
Enzymes [BR:xgl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     120784964 (rnf4)
Ubiquitin system [BR:xgl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    120784964 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-RING_5 zf-C3HC4 zf-C3HC4_3 zf-rbx1 zf_RING_Vps8 zf-RING_4 Prok-RING_4 RING_XB3-XBAT31 zf-C3HC4_4 Rtf2 zf-UDP TRAF3_RING zf-RING_11 zf-RING_6 zf-RING_16 zf-Nse zf-RING_10 zf-ANAPC11 Zn_ribbon_6 IBR_1
Other DBs
NCBI-GeneID: 120784964
NCBI-ProteinID: XP_039975083
LinkDB
Position
LG23:66552..71946
AA seq 209 aa
MSSSAQRKRRTTGSPLVSRPSTKTSRSANARRTANANRAANRTASRTASVSRMPDGDTAP
RTETIDVMDNTEDSVEEVVDLTCEGSEAAVVDLTNNDSVLLVDEGPQNRRVPTGESYIVS
SDEDEDTPPVLKAAMVSSVHTSRSTPGMVSCPVCLDSYSEIIDSGRLVVSTKCGHVFCSQ
CLRDALTSSHTCPTCRKRLTHRQYHPLYI
NT seq 630 nt   +upstreamnt  +downstreamnt
atgagcagctctgctcagaggaagaggaggaccacggggagtcctctggtttccagaccc
agcaccaagaccagcagatcggctaacgctaggaggacggctaacgctaatagagcagct
aacaggacggctagcaggacagctagtgtaagcaggatgcctgatggtgacactgccccc
cgcacagagaccatcgatgtgatggacaacactgaggacagtgtggaggaggtggtggat
ctgacctgtgaaggatcagaagctgctgtggttgacctcacaaacaacgactcagtactg
ctggtggacgaaggtcctcagaacaggcgagtcccaacaggtgagagttacatcgtcagc
agtgatgaagacgaggacacaccccctgtcctcaaggcagccatggtgtcctctgtacac
acctccaggtcgactccggggatggtcagctgtcccgtctgtctggactcatattctgag
atcatcgacagcggccgattggttgtttccactaaatgtggtcacgtgttctgcagtcag
tgtctaagagacgctttgacatcatcacacacctgtcctacctgcaggaagagactcacc
caccgccagtaccatcccctctacatctga

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