KEGG   Xiphias gladius (swordfish): 120784968
Entry
120784968         CDS       T07311                                 
Symbol
cul4b
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl03420  Nucleotide excision repair
xgl04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120784968 (cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    120784968 (cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xgl04121]
    120784968 (cul4b)
   03400 DNA repair and recombination proteins [BR:xgl03400]
    120784968 (cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xgl04147]
    120784968 (cul4b)
Ubiquitin system [BR:xgl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     120784968 (cul4b)
DNA repair and recombination proteins [BR:xgl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      120784968 (cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      120784968 (cul4b)
Exosome [BR:xgl04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120784968 (cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW TBX2-3_RD
Other DBs
NCBI-GeneID: 120784968
NCBI-ProteinID: XP_039975088
LinkDB
Position
LG23:complement(11197141..11207524)
AA seq 874 aa
MFPTGLSSPNPPPPPTQEARPAATDVKNDSGNITSPKKRKINGSEREDTSDTISPSPPKT
LNSSSSSSSSCSPTPLHIQKKLRFEDSVDFIGLDVKMAEEAAAAAAAAAAAAAAASCSNN
KSKAVFLSGGVGHHANGLTKTAGSGTFSNSKPGAAKKLVIKNFKEKPKLPENYTQETWQK
LKEAVEAIQNSTSIKYNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKAQIDQFREDA
LDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISD
LKVQSKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAA
EGQRLMQEREVPEYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLSATLQK
GLTHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQEL
LDFKDKVDHIIDVCFVKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEAT
DEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGA
AFTSKLEGMFKDMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPP
EMVRLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEG
EEFTLEEIKLATGIEDSELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLF
RIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKF
PVKPADLKKRIESLIDRDYMERDKEKSNQYNYVA
NT seq 2625 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttatcttcccctaatcccccaccaccgccaacccaggaggctaga
ccagcggctactgatgtcaaaaacgacagcggtaacatcacatctccgaagaagaggaaa
ataaacggctcagagagggaagatactagtgacacgatctccccttcgcctcccaagacc
ctgaattcctcctcttcttcctcctcctcctgctctcccactccgctacacattcagaag
aagttgaggtttgaggattcggtggatttcattggactggatgtgaaaatggctgaggag
gctgctgctgctgctgccgccgccgctgccgccgccgccgccgcttcgtgctctaataac
aaaagcaaagccgtgttcctgtccggtggcgtggggcaccatgcaaacggactgacgaaa
accgccggctccggcaccttctccaacagtaaacctggcgctgccaagaaactagtcatc
aagaacttcaaagaaaagcccaagttgcccgagaactacacacaggagacctggcagaag
ctgaaggaggcagtggaggccatacagaacagcacttcaatcaagtacaatctagaggag
ctctaccaggctgttgagaacctgtgctcccataagatttctgccaagctttacaaacag
ctgagagccgtgtgtgaagaccatatcaaggcacagattgatcaattcagagaggatgcc
ctggacagtgtgcttttcctcaagaaaattgacaagtgctggcaagatcactgccgacaa
atgatcatgattaggagtatatttttgtttttggaccgcacctatgttttacaaaattca
atgctgccatcaatctgggacatgggtctggagctgttcaggttctacatcatcagcgat
ctgaaggtccagagtaaaaccatcgacgggattctgctgctcattgagagggagcgaaac
ggagaagcgatagaccgtagtctgctgaggagcctgctgagcatgctctctgatctgcag
atttatcaagactcctttgagcagcgctttttggaggaaacaaatcgcctgtacgctgca
gagggacagaggctgatgcaagagagagaggtaccagaatatctccatcatgtcaacaaa
cgcttggaggaggaggctgacagagtcatcacatatctagaccagagcacacaaaaacca
ctcattgctactgtggagaagcagttgctgggtgaacatctcagtgcaactctgcagaaa
gggctgactcacttgctggatgagaacagaattcaggatctgtctcttctctatcagctc
tttagtcgagtgcgaggtggtgttcaggtcctcctgcaacactggatagagtacataaag
gcttttggaagcacaattgtaatcaatccagaaaaagacaaaaccatggtgcaggagttg
ctggactttaaagacaaagtggatcacatcatcgacgtctgcttcgtgaagaacgagaag
tttgtcaatgcgatgaaggaggctttcgaaacattcatcaacaagcggccaaataaacct
gcagagctcatagcaaaacacgtggattcaaagctacgggcaggaaacaaagaggcaaca
gatgaagaactggagaagatgctggataagatcatgattatctttagattcatctatgga
aaagatgtttttgaggccttttacaaaaaggatctggccaagaggttgctggtcggaaag
agcgcttctgttgatgctgaaaaatcaatgttgtcaaagctgaaacatgaatgtggagca
gcgttcaccagcaaactggaggggatgttcaaggatatggagctttctaaagacatcatg
gtgcagttcaaacagtatatgcagtgccaaaacattcctggcaacatcgagctgaccgtc
aacatcctcactatgggttactggccaacttatgtcccaatggaagtgcacctgcctccc
gagatggtgcgactgcaagagatcttcaagaccttctacctgggcaaacacagtggcaga
aagctgcagtggcaatcgacactaggccattgtgtcttaaaagctgaatttaaggagggc
aagaaggagctgcaggtgtcactcttccaaacacttgtgctactgatgtttaatgaagga
gaggagttcaccttggaggagatcaagctggcaacaggaatagaagacagcgaactgcgc
cggacgctgcagtcacttgcttgtggaaaagcacgagtcctcaccaagatcccaaaaagc
aaagacgtggaggacggggacaagttttcctgcaacgatgatttcaaacacaaactcttc
aggatcaaaataaaccagatccagatgaaagaaacggtggaggagcaagccagtacaaca
gaaagggtctttcaggatcgtcagtatcagatcgatgctgccattgtgcggatcatgaag
atgaggaagactctgagccataatctcttgatgtctgaggtgtacaaccagctcaaattc
cctgtcaagcctgctgacttgaagaagaggatagagtctcttattgacagggactatatg
gagcgtgacaaggaaaaatccaaccagtataactatgtggcttaa

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