KEGG   Xiphias gladius (swordfish): 120785119
Entry
120785119         CDS       T07311                                 
Symbol
kdm3b
Name
(RefSeq) lysine-specific demethylase 3B isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
xgl  Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xgl03036]
    120785119 (kdm3b)
Enzymes [BR:xgl01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     120785119 (kdm3b)
Chromosome and associated proteins [BR:xgl03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120785119 (kdm3b)
SSDB
Motif
Pfam: PWWP_KDM3B Tudor_KDM3B JmjC DUF7030 Cupin_2
Other DBs
NCBI-GeneID: 120785119
NCBI-ProteinID: XP_039975429
LinkDB
Position
LG23:17463957..17483855
AA seq 1798 aa
MGDSLELIGKRLLLLLDDGRSANGSEPEQAAWARDWLRGTVRAVSVIGLAAPDVSEGEAT
TTTTAAGLTVFVEFENASQRCSWVQVYDKGVKAVLVEDSIVWANRSDGTGTTGAPASATA
WPALAFRSLVDRVGLGSLVPVEYFGNKNFEFLPDNKTVQRFEVDKDTRHPLLLEQPSLQA
AISSWCTDFELQEIFRKGSYTIQGRRVRVYQPEFEECWASGLVSQHNPISHIMEITLDKG
EENQIVDPRVIHVMLAEEEFGKIGRRRKDSETVKGDSGRRRRTASEGEDDLNLKRFKGAG
DTGADAQNCGDSNKTPVEGMGMWMGDSGERVSSTTKNGNSPEGTFPQGRVSSPNTNSSLQ
MDQSNATPPLYPAHVKENGRSLSTQGAADSTTTITHTPTPPPLKPAPSPFSTTSFPSLGQ
MPSLVPGAPAPKASPCPQPDREEASQSAFSKTAALVSPGPVTISWSHDSGPSVALSASVG
FSPKAPTWGSQTEGTKTALGFRLPQAAPAAPVFGDVTSQTNGAPATTTTSQDTPRPFGFG
FGGAKNETQSQQDQNLFFQCMTQNSGSGPSLTAGQTQSKDTNYFTAVSESLSKEPPSLFK
PATSTEGLKKPEQPKVPETHPTGNGVLNKSSSGFQGMGGSAGGRGSGLSIGGLTAASGAQ
STSKKSSNNGTSTTGLGLQSGFNTSDSHQNLFLQASKEPTNPFLAYGDKTSHTSFAGLSG
TEPQTLVPASDSKQKFFIMTEPPKGIMSSPFPALSAAASPSSSSSPAPASSQKSQSDGAV
TKEEQEVGEMPTSTSGCSMFGSTGPGGMEDVPVSFDQSQSQKFTLEERGQSSKRDSDSSS
NSDLSDLSENEEGPEKGQVLGGPPHPTKDGAMLQKTKVQGASKSRPRNKPFKVGQSVLKD
QSKVRRLKQSGESFLQDGSCINVAPHLHKCRECRLERYRKYRNTDEDSDDDDDPNVACRF
FHFRRLAFTRKGVLRVEGFLSPQQSDSMAMGLWLPAPAVQEGLDLDTSKYILANVGDQFC
QLVMSEKEAMMMVEPHQKVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRL
RRNRPREDVDEGPEDEVFSWLKCAKGQPHEPQNLMPTQIIPGTALYNIGDMVHSARGKWG
IKANCPCASRHTKPLVRPSAPNGISQQSTTSGGGGLAAAASGIGTTPKSEGETSAIKTET
TQIAVSSDSGGGESVGSTSNSTSGTSSPCNLTQSSAKESRSSGEGNSSALHWLADLATQK
AKDDTKESGSLRSMMSRDSRPPFGLDSLSALSKPSASSPKLFNSLLLGSSMAQSKPEGSS
LRDLLNSGPGKLPQGPGESGVPFPSVFTSAGSDKLKSSLPNFLDHIIASVVETKKAEGRR
TGASEGGELGVLGGRKDGVMGLSVLEPHTSHSWLCDGRLLCLQDPSNSNNWKIFRECWKQ
GQPVLVSGIHKRLKANLWRPEAFSEEFGDQDVDLVNCRNCAIISDVKVRDFWDGFQVISK
RLQDSDGQPMVLKLKDWPPGEDFRDMMPTRFDDLMENLPLPEYTKRDGRLNLAARLPNFF
VRPDLGPKMYNAYGLISSEDRKVGTTNLHLDVSDAVNVMVYVGIPQGDGDQEQEADISGR
KEVMTTIEEGDVDEMTKRRVYEGKEKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPD
HDPIHDQSWYLDQVLRRRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAED
FVSPEHVRHCFRLTQEFRHLSTTHTNHEDKLQVKNIIYHAVKDAVGTLKAHEPKLARP
NT seq 5397 nt   +upstreamnt  +downstreamnt
atgggggactctctcgaattgatagggaagcgtctgcttttgctcctcgacgacggcagg
tccgcgaatggatccgagccggaacaggctgcctgggcccgggactggctcagggggacg
gtgcgggcagtgagtgttatcggcctcgccgccccggatgttagcgaaggagaggcgaca
acaacaaccaccgctgcagggctgacggtatttgtggagtttgagaacgcttcgcagcgt
tgttcctgggtgcaggtgtatgataaaggggtgaaagcagtgttggtagaagactccatt
gtttgggccaatcggagcgatggtactgggactactggagccccagcctcagccactgcc
tggcctgcactggctttccgttccctagtggatagagtgggtttaggatcgttggttccc
gtggaatattttgggaacaagaattttgagttcctgcctgataacaaaactgtccagagg
tttgaggttgataaagacacaagacaccctttgctgttggagcagccctccctgcaggct
gccatctccagctggtgtactgactttgaactgcaggagatattcaggaagggttcatac
actattcaaggacgcagggttcgtgtgtaccagccagagtttgaggagtgctgggcctca
gggctggtctcgcagcacaaccctatttcacacattatggagattaccttggataaggga
gaagaaaatcagatagtagatcctcgtgtgatacatgtcatgctggcagaggaggagttt
ggtaagattgggcgacgaaggaaagacagtgaaacggtgaagggcgatagtggacgcaga
cgtaggactgcctccgaaggtgaggatgacttgaacttgaaacgttttaaaggagcagga
gacacgggagctgacgcacaaaattgtggcgactccaacaaaaccccagtggaagggatg
gggatgtggatgggggactccggcgaaagagtcagcagcacaaccaaaaacggaaactct
cccgaaggaacctttcctcaaggcagagtgtcgtcccccaacaccaattcctcactccaa
atggaccaatcaaatgcaactcctcctctttatccagcccatgtcaaggaaaatggtcgc
tcactctccacacaaggggcagcagactccaccaccaccattactcacacccccactcct
cctcccctcaaaccagccccctctcccttctccaccacatctttcccttcactaggccag
atgccaagtttggtccctggtgctcctgcccccaaggcctcaccatgcccccagccagac
cgagaggaggcctcccagtcagcctttagcaaaacagcagctcttgtttccccaggccct
gtcaccatttcttggtcacatgacagtggacctagtgtggcactttctgcctctgtgggt
tttagtcctaaagcccccacctggggaagccagactgagggcactaaaactgccttgggt
tttcgtttgccccaggctgcacctgctgctcctgtatttggagatgttacctctcagacc
aacggagctcctgccactaccacaacctcccaggacactcccaggccgtttggctttggc
tttggtggagcaaagaatgagactcaatcccagcaagaccaaaacttgtttttccagtgc
atgacccagaattctggctcaggcccaagcctaactgccggtcagacccaatccaaggac
accaattacttcaccgcagtgtctgagagtctgagtaaagagcccccaagccttttcaag
cctgcaacctccactgaagggctgaaaaagcctgagcagcccaaagtgcctgagacccat
ccaacgggaaatggtgtgctcaataaatcgtcatcaggcttccagggcatgggtggctct
gcaggaggaagaggctctggtctaagtattggcggtctgactgcagcttccggagcccaa
agtacttctaagaagagcagtaataatggaacttctacaacgggcttagggctgcagtct
ggttttaatacttcagatagccaccagaacctttttctgcaagcttccaaagagcctact
aatccatttctggcatatggggacaaaacctcccacacgtcctttgctggactcagtggg
actgagccacagaccctggttcctgcctcggacagcaagcaaaaattcttcattatgaca
gagccacctaaggggattatgtcttcccctttcccagcactctcagcagctgcttcaccc
agctcttcctcctctccagcaccggcctcatcccagaagtcacagagtgatggggctgtg
acaaaggaggagcaagaggttggggagatgcctacatccacctcaggctgttccatgttt
ggaagtactggccctggtggaatggaggacgtgcctgtgtcctttgaccagagccagtct
cagaagttcaccctggaggaaagagggcaatcgtccaaacgtgactctgactccagcagc
aacagtgacctgtcagacctgagtgagaatgaagagggcccagagaaaggccaagtccta
ggagggccaccacaccctacaaaggatggggctatgctgcagaaaactaaagtccagggg
gcttctaagagccgtccacgtaataagcctttcaaagtgggccagtctgtgttaaaagac
cagagcaaggtgcgtcgtttgaagcagtctggtgagtcctttctccaggatggttcctgc
atcaatgtggcccctcacttgcacaagtgccgcgagtgccgcctggagcgttaccgtaaa
tatcgaaatacagacgaagacagcgatgatgatgatgacccaaatgtagcctgtcgtttc
ttccacttcagaaggttggctttcactcgtaaaggtgtactgcgcgtggaaggcttcctg
agtcctcagcagagtgattccatggctatgggtctgtggctacctgcaccagcagtccaa
gaggggcttgacctcgatacatccaagtacatcctggccaatgtgggagaccagttctgc
cagttggtcatgtctgagaaggaggccatgatgatggtggaacctcaccagaaagtggcg
tggaaacgagctgtgcgaggtgtcagagaaatgtgtgacgtatgtgagaccaccctgttc
aacatccactgggtgtgccgcaagtgtggttttggagtgtgtctggactgctatcggctc
cgcaggaacaggcctagggaggatgtagatgaaggtccggaggatgaggttttctcttgg
ttgaaatgtgccaaaggtcaacctcatgagccacagaacctgatgcctacgcagattata
ccggggacagctctttacaacataggagacatggtgcattcagcaaggggcaagtggggt
attaaggccaattgtccctgcgccagtcgacacactaagcctttagtgcgccccagtgct
cctaatgggatttcacagcagtctacaacaagcggtggtggtggccttgcagctgcagct
tctggcattggcaccactccaaaatcagagggagaaacgtcagcaatcaaaacagaaact
acacaaatagcagtgtcatcagacagtgggggcggggaaagtgtgggcagtactagtaac
tccaccagcggtacatcctccccctgcaacctcacccagtcctctgccaaggagtcgcgc
tcatcgggagagggcaacagctctgctctgcactggttagcagacttggccacacagaaa
gccaaggatgacaccaaggaatccggttcacttcgctccatgatgagtcgagacagtcgg
cctccctttggccttgactcactcagtgccctgtcaaagccttctgcttctagtcctaaa
ctatttaacagcctcttactgggctccagcatggcccagtccaaacctgaagggtccagt
ctccgggatctcctcaactctggaccgggcaaactcccccagggccctggagagagcggg
gtaccattcccctcagtctttacctcagcaggcagtgacaagctgaagagcagcctccca
aacttcctggatcacatcatcgcctcggttgtggagaccaagaaggcagaaggccgtcgc
actggggcctctgaaggtggcgagcttggtgtgttggggggccgcaaagatggagtaatg
ggccttagtgttttagaaccacatacttcacactcctggctctgtgatggacgactcctc
tgcctacaggatcccagcaacagcaacaactggaagatcttcagagagtgctggaagcag
ggacaacctgtgttggtgtcagggatacataaacgtctgaaagctaatttgtggcggcct
gaagccttcagtgaggagtttggagaccaggatgtagacctggtcaactgtagaaactgc
gctatcatctctgatgtgaaggtgcgagacttctgggacggcttccaggtcatctccaag
cgactgcaagatagtgacggccagcccatggtgttgaagttaaaggattggcccccaggg
gaagacttcagggacatgatgcccacacggtttgacgatttgatggaaaacctccccttg
cctgagtacacaaaaagagatggtcgtctaaaccttgccgcccgtctgcccaactttttt
gtgcgtcctgaccttggtcctaagatgtacaatgcctatggcttaatctcgagtgaagac
aggaaggtgggaaccactaacctccatctggatgtatctgatgctgtcaatgtgatggtt
tatgttggcatcccccaaggagacggagaccaggagcaagaggcagatatctctggacgc
aaagaggtcatgaccaccatcgaggagggtgatgtggatgaaatgacgaagcggagggtg
tacgagggaaaggagaaacctggagcactctggcacatctatgctgccaaggatgctgag
aagatcagagaactgctccgcaaggtgggagaggagcagggtcaagaaaaccccccagac
cacgaccccattcatgaccagagctggtacctggaccaggtgctccgccgcaggctttat
gaagaatatggtgtccagggctgggccattgtacagttcttaggagatgctgttttcatc
cctgctggagcaccacaccaggtgcacaacctgtacagctgtatcaaggtggctgaggac
tttgtgtctccagagcatgtgaggcactgttttagactgacccaggagttcagacacctg
tccactacacatacaaaccacgaagacaagctacaggtgaagaacatcatctatcacgca
gtgaaggacgctgttgggacactgaaggcccatgaacctaaactagcacgcccttag

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