Xiphias gladius (swordfish): 120785165
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Entry
120785165 CDS
T07311
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04010
MAPK signaling pathway
xgl04210
Apoptosis
xgl04218
Cellular senescence
xgl04620
Toll-like receptor signaling pathway
xgl04621
NOD-like receptor signaling pathway
xgl04622
RIG-I-like receptor signaling pathway
xgl04623
Cytosolic DNA-sensing pathway
xgl04625
C-type lectin receptor signaling pathway
xgl04920
Adipocytokine signaling pathway
xgl05132
Salmonella infection
xgl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120785165
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120785165
04218 Cellular senescence
120785165
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120785165
04621 NOD-like receptor signaling pathway
120785165
04622 RIG-I-like receptor signaling pathway
120785165
04623 Cytosolic DNA-sensing pathway
120785165
04625 C-type lectin receptor signaling pathway
120785165
09152 Endocrine system
04920 Adipocytokine signaling pathway
120785165
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120785165
09171 Infectious disease: bacterial
05132 Salmonella infection
120785165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120785165
Transcription factors [BR:
xgl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
120785165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
Ank_2
RHD_DNA_bind
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
120785165
NCBI-ProteinID:
XP_039975538
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All DBs
Position
LG23:complement(1018970..1045009)
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AA seq
868 aa
AA seq
DB search
MTSVPQLHAHSLVGKQCDKGICIADLQPKDCSISFPNLGILHVTKKNVAKTLEERMIEAF
RMGYNCGVCIHPEIDGLQGEVRVPRDLHDHQRSVINSAASLQAKEMDLSVVRLMFTAFLP
DSDGGFSRRLEPVVSEPIYDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQ
VRFYEEDDSGLTWEALGDFSPTDVHRQFAIVFKTPKYRDQNLQKPTSVFVQLKRKSDNET
SEPKPFTYHPQIIDKEEVQRKRQKTLPNFQDFSGHGGGGGGGLYRGGGPAAGGGPGSAGG
YFQGFTTYNYGGGGGGFSTGYSAGLGVGGGGGIKHASQGDAADDGGDDSDPGDDSGSGAA
LRAAARTRGTGVVERTEDGGVSVEPEPERVCDAGERWVQVTSRQLEALFQYSVTGDSAYL
LAPQRPLMTHRMKTETLGSTWRFSTASEALKSLTQVVSALPGEEVLNMRNHLYQTPLHLA
VITQQKEAVEALLLAGADATLTDRHGNTALHLASQQEGGGMVQFLLQHRELRGLLDHANT
AGLCAIHLAVLSNQLSALRELLEGGANVEAQERSCGRTALHLATEADNVSLAGCLLLEGN
AKVDCCTFNGSTPLHIAAGRGSVKLTALLMAAGADPHRENFEPLFFGEEECCDKEREDED
EDEGYIPGTTPLNMATSTQVLELLNGKEYKPQSRHRALSPPQGDLASLDVEVKQEVCRAL
ESEGCWENLAHSLGLGILNTAFRLSASPAKTLLESYEVSGGTVSDLLVGLRSVGECRALS
VLEEALRCPDSRETPTTNETTGESLCAQVRDLKWTFGSTAGFVTVGWSFPQRNDLIGPSP
AGFIRGSTVHPSIIHPSIRAKSFSSLNF
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgacctctgttcctcagcttcacgctcacagtctggtgggaaaacagtgcgacaaaggg
atctgcatcgccgacctgcagcccaaagactgcagcatcagtttccctaacctggggatc
ctccacgtgacgaagaagaacgtggcgaagactctggaggagaggatgatcgaggccttc
aggatgggatacaactgtggagtctgcatccaccccgagattgacggcctgcagggggag
gtccgagtcccccgagacctccacgaccaccagcgcagcgtgatcaacagtgcagcgtct
cttcaggctaaagaaatggacctcagtgtggttcggctcatgttcacggcgttcctcccc
gacagtgatggaggtttctccagacgactcgaacccgtcgtgtctgaaccgatctacgac
agcaaggctccaaacgcctccaacctgaagatcgtgaggatggatcgaaccgccggctgt
gtgaccggaggagaggaggtctacctgctctgtgacaaagtccagaaagatgatatccag
gttcggttctatgaagaagacgactccgggttgacctgggaggctctgggagatttctca
ccgacagacgtccacaggcagttcgccatcgtcttcaagactccgaagtatcgagaccag
aacctgcagaagccgacgtcggtgttcgtccagctgaagaggaagtctgacaacgagacc
agcgagcccaaacccttcacctaccaccctcagatcatagacaaggaggaggtgcagagg
aagaggcagaagacgttgccgaacttccaggacttcagcggtcacggagggggcggagga
ggaggtctgtaccgaggaggaggtccagcggcaggaggcggccctggctctgcaggaggt
tacttccagggattcaccacctataactatggaggaggaggaggaggattctccacaggt
tactcagctggtctgggagtaggaggaggaggaggcatcaaacacgcctctcagggcgac
gcggcggacgacggcggtgacgacagcgatccaggcgacgactcggggtcgggggccgcg
ctgcgagctgcagcacggacgagaggcacgggggtcgtggagaggaccgaggatggaggg
gtcagtgtggagccagaaccagaaagagtgtgcgatgcaggcgagcggtgggttcaggtg
accagcagacagctggaggctctctttcagtactctgtaacaggtgattcagcgtacctg
ctggctccgcagcgccccctgatgactcacaggatgaagacggagacactgggctccacc
tggcggttctccacagccagcgaggcgctgaagagtctgactcaggttgtttctgctctg
cctggagaagaagtgctgaacatgaggaatcacctctaccagactcctttgcacctggct
gtgatcacccagcagaaggaggcggtggaggccctgctattggccggagccgacgcgact
ctgactgatcgtcatggcaacacggcgctccacctggcgtcccagcaggaaggaggcggg
atggtccagtttctactgcaacacagagaactgagaggactgctggaccacgccaacaca
gcaggtctgtgcgcaatccacctggcggtcctgtccaatcaactgtctgctctcagggag
ctgctggagggcggggccaacgtggaggctcaggagcgcagctgcggacggaccgccctc
cacctcgccacagaggccgacaacgtgtcgctggccggctgcctgctgctggagggaaac
gccaaggtggactgctgcacctttaacggctccacccccctccacatcgccgctgggagg
ggctccgtcaagctcacggccctcctgatggctgcaggtgcagaccctcacagggagaac
tttgagccgctgttcttcggagaggaggagtgctgcgacaaagagagggaagacgaggac
gaagatgagggctacatcccaggaacaactccgctcaacatggccacctccacgcaggtg
ctggagcttctgaacggtaaagagtacaaaccacagtctcgtcacagagccctcagccct
ccgcaaggcgaccttgcgagcctggacgtggaggtgaagcaggaggtgtgtcgtgctctg
gagagtgaaggatgctgggagaatctggctcacagtctgggtctcgggatcctcaacacg
gccttcagactgagcgcctcccccgccaaaacactgctggagagctacgaggtttcaggt
gggacggtcagcgatctgttggttggtctgaggtcagtgggagagtgcagagctctgagc
gtcctggaggaggcgctgcgttgccccgactccagggaaacgccgacgaccaacgagacg
accggtgagtctctgtgcgctcaggttcgggatctgaagtggacgttcggatcgacagcg
gggtttgtgacagtggggtggagctttccacagcgtaacgacctgatcggtccgtctcca
gctggcttcatcagaggaagcacagttcatccatccatcatccatccatccatcagggct
aaaagtttctcatcgttaaacttttaa
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