Xiphias gladius (swordfish): 120785175
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Entry
120785175 CDS
T07311
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120785175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xgl03036
]
120785175
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120785175
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
DHR-2_Lobe_C
Cnd1
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
120785175
NCBI-ProteinID:
XP_039975563
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All DBs
Position
LG23:8940578..8962435
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AA seq
1222 aa
AA seq
DB search
MATGDSVLDSLEEWEDSSNSGSDYEATIKVTKRKKQAVPGPKPPKRPRRKAALRVASRPS
SSPIPTPLDPSLQLQQQHSRGTSRQVFPSPVRRVNEGNRGISAEDIYDAVRFGKSAMVAV
VDEWLDSYKRSREVGLLVLINFIVQSCGCKGVVSRQMFDSMQNAEIISRLTKEFNEDSVN
YPLCTPGPQLKRFKAGLSEFAQVLLRSCRNSLIYDEYLFPTLLALLTGLSDSQVRAFRHT
STLLAMKLMTGLVEVVVTVSVQLQTTQRRYDTENGKREHDRASDRLEELQATISELQEKR
EELSSMMNATFRGVFVHRYRDRLPEIRVACIEELGMWLKTDPEDFLNDGCLKYLGWTLHD
KQSPVRLRCVRALQGLYQEKEFIGRLELFTNRFKERMLSMVLDKDPDVAVEVVNLLLLIQ
QRTEEGLREEECGHIYPLVYASHRGLASAAGAFLYNKLKSVISHDNQEDEKSDNATFFQI
LISFYIQSEFHEHGAYLVDSLWGVAGSELRDWETMTAFLLQEAGLMYEEEGALIELMMCA
LRQAAHATPPVGRTHSKKSLSMKDKKIQEQDRRRITTHFIPLLPQLLTKYSADAGKVRLL
LKAPLYFNLEMYSSAQWLEKHLDLLLSQVCGIVEKHTEVTVLEACTHVAHSLCSDSYTFS
SRAHLAFSQLLDGLTECFGTYLSDLLQGTADDNDIYSAATALKRIAALSGAKDPTGWKLF
DSCLELLKSRMESRELDKELMVSALKCAALHLMWAKVNAVNYKPAEAELKRLKKEVRAFC
RVCETCLSLNQTEIRDRAFELLCDLLLLYSISSVRSEPALQALVHLPSDSLRSEMAAFLL
DYIFTDSEDAELNVEGEEEMKITLLQKKRNQLAGYCKLVIYGVLDLTAATDVFKHYSKYF
KDFGDIIKETVSKSKLINPVQSARTVCLSLQQLFSEMLTEDHSRQDLREIRDLAKRLAMS
FGIDLHRVRKPLVALHMDGIRFAFRDPQEGAEQLPNMAFLEILSEFSFKLLQQDRAQLAA
LLKSECPSAALSWPSVRLYQRSLEVRTPSRPREHEERGDAVSSHETPVAKRKRTTARGSV
SSTTRGSWLDSSSINSRLHTPALTSTVQRQPAKKLASRKPTALESDIGSGLNEPESEDEF
SSGPQMRKVKQIKRRQLSSSQTGPNLDQQDLNSHLTLLSLIEDDTAERGEAEIEDYESDR
ESAYTLPSTRHTSASVLDELFD
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggcaactggagactcagttttggacagtcttgaggagtgggaagattcctcaaactct
ggcagtgattatgaggcaacgataaaagtcacaaagcggaaaaaacaggcagtgcctgga
cctaagccacccaagagacccaggcgtaaagctgcattgagggtggcgtccagacccagt
agtagccccatccccactcctctggacccctccctgcagctgcagcagcagcactcccgg
gggacatccaggcaggtctttcccagtcctgtgagaagagtgaatgagggaaaccggggt
atcagtgcagaggatatctatgatgcagtccgctttggaaagagtgccatggtggcggtg
gtggacgaatggctggacagctacaagcgaagccgagaggtggggctgctggtgctcatc
aacttcattgttcagtcctgcggatgcaaaggtgtggttagtagacagatgtttgacagc
atgcagaatgctgagatcatcagcagactaactaaagagttcaatgaggattcagtgaac
taccctctgtgcactccaggaccccagctgaagcgtttcaaagccggactgtccgagttt
gctcaggttctgctacgctcctgtaggaatagcctcatttatgatgaatacctcttcccc
accctgctggccctgctcactggcctctctgactcccaggtccgagccttcagacacacc
agcaccctgcttgccatgaagctgatgactgggctggtggaagtagttgtgacagtgtct
gttcagctgcaaaccacccagcggcgttatgacacggagaacggcaagagagagcatgac
agagcctctgacagactggaggagctgcaggccaccatcagtgagctgcaagagaaaaga
gaggagctgtcctccatgatgaacgctaccttccgtggtgtgtttgtgcaccgttaccgg
gaccggctaccagagatccgggtggcatgtattgaggagttgggcatgtggctgaaaacg
gaccctgaagacttcctgaatgatggatgcctcaaatacctgggttggaccctgcatgat
aagcaaagtccagtgcgtctgcggtgtgtgcgtgccctgcagggtctgtaccaggagaag
gaattcattggtcgcctggagcttttcaccaatagatttaaagagaggatgctcagcatg
gtgttggacaaggacccagacgtggccgtggaagtggtcaatctgttgctgctgatccaa
cagaggacagaggaaggcctgagagaagaggagtgtggccacatctatcccctggtttac
gcttcacaccgaggcctggcgtctgcagccggcgccttcctctacaacaagctgaaaagt
gtcatttcccatgacaaccaggaggatgaaaaaagtgacaatgcaactttctttcaaatc
ctcatctccttctacatccagagtgagtttcatgagcacggggcatacctggtggacagt
ctgtggggtgtggcaggatctgagctgagggactgggagactatgacagcattcttgcta
caggaggctggtctgatgtatgaggaggagggggctctcattgagctgatgatgtgtgcc
ctcagacaggcggcacacgcaaccccacctgtcgggagaactcacagcaagaagagcttg
agtatgaaagataagaagatccaggaacaagacagaagacgtattaccacacacttcatc
cctttactgccacagctactgaccaagtactcggcagatgcagggaaggtgcgcctcctt
ctcaaagctcccctctacttcaacctggagatgtacagcagcgctcagtggctggagaag
catctggacctgctgctgtcccaggtatgtggcattgtggagaagcacaccgaggtcacc
gtgttggaggcttgcacccacgtggcccacagtctttgttctgactcttacaccttctcc
tcccgcgcacacctggcattcagccagctgttggacggcctgaccgaatgcttcggcaca
tacttaagtgacctgctgcagggcactgcagatgacaatgacatatacagtgcagccact
gccttgaagaggatcgctgctttgagcggtgcaaaagacccgacaggctggaagctgttt
gactcctgccttgaactgctgaagagcaggatggagtccagagagctcgacaaggagctc
atggtgtcggctctgaagtgtgcggcgctacacctgatgtgggccaaagtgaatgctgtc
aactacaagccagctgaggccgaactgaagcgtctgaagaaggaggtgcgtgcgttctgc
agagtctgtgagacgtgtctgtctctgaaccagactgagatcagagatcgggcatttgag
ctgctgtgtgacttgctgctgttgtacagtattagttcggtccgctctgaacccgccctc
caagcactggtccaccttccctctgattccctacgctccgagatggctgctttccttctg
gactacatcttcactgactctgaagatgctgagctcaatgttgagggggaggaagagatg
aagataactcttctccagaagaagcgtaaccagctggccggctactgtaagctggtcatt
tacggagtgctggacctcaccgccgccaccgacgtcttcaagcactacagcaagtacttt
aaagactttggtgacatcattaaagagactgtgagcaagagcaagctcatcaatcctgta
cagagcgccaggacagtctgtttgagcctacagcagctgttctcagagatgcttacggag
gaccatagcaggcaggatctccgtgagattagagacttggccaagaggctcgccatgagc
tttggcatcgatcttcatcgtgtccgcaaaccactggtggccctgcacatggacggtata
cgttttgcgtttcgcgacccacaggagggagcggagcagcttccgaatatggccttcttg
gagattctcagcgagttcagttttaagctgctgcaacaggaccgcgcccagctggctgca
ttgttgaaatcagagtgtcccagtgctgccctctcctggccctcggtcagactgtatcag
cgttctttggaggttcgcaccccttccagacccagagagcatgaggagagaggtgatgct
gtctcctcacatgaaactcctgtagctaaacgcaagaggaccactgctcggggttcagtg
tccagcaccaccagaggatcctggttggacagcagcagtatcaacagcagacttcacacc
ccagccctcacctctactgtccagagacagccagccaagaagctggcctccagaaaaccc
acagcactagagtctgatatcggcagcggcttaaatgagccggagtccgaggatgaattc
tcctcggggccccagatgcgaaaggtgaagcagatcaaacgacgccagctgtcctccagc
cagactggccccaatttggatcagcaagacctgaactcccacctcaccttgctgtccttg
attgaagatgacactgcagaaagaggggaggcggagattgaggattatgaaagtgaccgt
gaatctgcatatacactgccctccactcgtcacacttcagccagtgtccttgatgagctc
tttgattga
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