Xiphias gladius (swordfish): 120785183
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Entry
120785183 CDS
T07311
Name
(RefSeq) synaptopodin 2-like protein isoform X1
KO
K21112
synaptopodin
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120785183
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
120785183
NCBI-ProteinID:
XP_039975586
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Position
LG23:19675250..19692471
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AA seq
1132 aa
AA seq
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MTDSTASSYRPPSLLPSFPPSLPACLPACLSVCVLDCGGKETRSCVSLQKRGVKLSDAVK
LKTLLEVLPNGGALTFDTEKDLTRSASLSEKELKEARVRSQIIAAQLTIPSNSSSRGVQL
FNRRKQRVNAFTLESCGEGSEEDRAENVKTDPSSNKLTWAERSSEEKDRDLNLKNSTTKP
LFSPPVRVPTVGDIMEEPGKDFQKEEDMEGSVIQERHFLPVKEEQEEEEEARDKIHEDKV
KDEIPLGSNNTDPVMMEHVKGEAEINGGHTGTAPRGMLLNGCHNASGPERVSVSTSKQTS
AILNRTARPFFSPVTVQSPEAVSPVMDIPPPPSYTTPPLPAFTAAQPVVFSPPPPPPSYP
TPPLPAFTNQPPQAYYSSPPPMSPVMLPSSPPPSQLPVSSISHYPPMPHYGPPTAPKPST
SVPQPSGERKLIAPSKTGVLEEVAARRASKKSMFTFKEKPVVAPNPELLSLVQGVDERKK
HGQRSVPEPTSEEELLALGAEASNFLAKEEDREEEARTPEWASCLKSSRTRPRAEHRPEQ
ILTNVSGKGAELFAKRQSRMEKYVIENQNAGQMRSPSPTMSLPPSWVYPSNMPGRVKAIA
KNSDMSAQLSQNLKAQQAVQQKPRQKAPAPQPVLEPPPLENGCSKIEMDLSRHRPYQLSS
SLFTFNPVKDPISMLPRGAPQAKNLVSTQTFPRQTSLPNNPPSHLSTQCMSPQLPLSPTG
GAAYLSNPASGQPRISSPMPAFSPERVSSPRSGVQAPRPTFSAKKAGISPQTPKDSPTVE
THCQTPPPTRTPSLIGRFSSPEGPTTGTWTPSLQTNRPSTTSSYSNRSVTSPVSSPRGTR
CQSPMISQNIQFSSTSTTASRPSQTSTVTSPRSPPWGSRCRSPMVSQNTQSSTISSVPTP
RASQTSTTATPPWGSRCQSPIVSQNTSTVVSISPSRPSQTFTATSPVSPPWGSRSQSPAL
SQASLSFLATKPLYTSSATSPIPPTKDSRCMSPIANNLDSKANHRLLAKNIINAAKRKNS
PSPGALSGHSLPISPLGNSHHGYDCQKPPISPFQSRALGAQSPTFTSPPPTPTQRICSPV
RLYNTRSLTDSDASVESEDSGLRSPGLHSYNTCPRGWGGSLRVKRGTVSTDL
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgacagacagcacagcctccagctacagacccccctccctccttccctccttccctcct
tccctgcctgcctgcctgcctgcctgcctctctgtctgtgtcctggactgcggaggaaaa
gaaacccgatcctgtgtctcgctacagaaaaggggcgtgaagctatcagacgcagttaaa
ttgaaaactcttctggaagtactaccaaacggcggagctctgacttttgacacggaaaaa
gatctgacacggagcgccagtttatcagagaaggagctcaaagaggctcgagttcggagt
cagatcattgcagctcagctcaccatcccttccaactccagctccagaggcgtgcagctc
ttcaaccgccgcaagcagagagtcaatgccttcacgcttgaaagctgtggagaggggtca
gaggaggacagagcggagaatgtgaaaaccgacccctcgtctaacaaactaacatgggca
gagaggagcagtgaggaaaaagatagagatctcaacctaaagaatagtactaccaagcca
ctcttctcaccacctgtaagggtacctacagtaggtgatatcatggaggagccaggtaaa
gacttccaaaaagaagaggacatggagggcagtgttatccaggagagacacttcctccct
gtcaaggaagagcaggaggaggaggaagaagcaagagataaaatccacgaggacaaagtt
aaggatgagattccccttggaagtaataatactgatccagtcatgatggaacatgtcaag
ggggaagcagagataaatgggggacacacagggacagccccccgtggaatgcttcttaat
ggctgccacaatgcctctggacctgagagggtgtctgtgtccacatccaagcagacaagc
gccatcctcaacagaactgccaggccctttttctccccagtgacagtacagtctccagag
gcagtcagccctgtcatggacatccctcctcctccttcttacaccactcctcctctgcct
gctttcactgctgcccaacctgtggtgttctcacctccacctccgcctccatcatatccc
acacctcctctaccggccttcacaaaccaacccccgcaggcctactactccagtccacct
ccgatgtctcctgtgatgttaccttcttcccctccaccatcccagctccctgtttcgtct
atatctcactacccacccatgcctcattatggccctcccacagccccaaagccctccact
tctgttcctcagccctctggagagaggaagctaatagcaccaagcaaaacaggagtactt
gaagaggtggctgccaggagggcaagtaagaagtcaatgttcacattcaaagagaagcca
gtggtagctccaaaccctgagctactctctctggtgcaaggggtggatgaaaggaagaaa
catggacaaagatctgtgcctgagccaacatctgaggaagagttactggctctgggtgca
gaggcctccaacttcctcgcaaaggaagaggatagggaagaggaggctagaactccagag
tgggcctcctgccttaagagctccaggacccgaccaagggcagagcacaggcctgaacag
atccttaccaatgtttcaggaaagggggctgagctgtttgccaagcgtcaatccaggatg
gagaaatatgtcattgagaatcagaatgcaggacaaatgaggtctccttctcccacaatg
tctctgccaccatcttgggtttacccatcaaacatgcccggcagggtcaaggccattgct
aaaaactctgacatgagtgctcagctttcacaaaacctgaaggcccaacaagctgtccag
caaaaaccgaggcaaaaagctccagcgccacagccagttctggagccacctcctttagag
aatggatgctccaagatagagatggacctatcaagacatcggccctaccagcttagctcg
tccctcttcacctttaacccagtcaaggaccccattagtatgctacccagaggagcacca
caggccaagaaccttgtctccacccaaaccttccccagacagacttccttacctaacaac
cctccctctcacttgagtacccagtgcatgtctcctcagctgcctctcagccccacagga
ggagcagcatatctgtcaaatccagcctctgggcagccaaggatcagttctcctatgcct
gccttttctccagagcgagtgtcctctccccggtcgggggtccaggcaccaaggcccaca
ttttctgcaaagaaggcagggatttcaccacagacaccaaaggactcccccacagtcgaa
acccattgtcagactcccccaccaaccaggacgcccagtctcatcggacgtttcagcagt
ccagagggtcccaccacaggaacctggactcctagcctccaaaccaatcgcccctccacc
accagctcctactccaaccgctcagtcacttcccctgtctcgtctcccaggggtacaaga
tgccaatcccctatgatcagtcagaatatccaattttccagtacctccactacagcatcc
agaccctcccaaacatctacagtcacctctccacgctctcctccctggggttcaagatgc
cggtccccgatggtgagccaaaatactcagtcttccaccatttcctctgttcctacacct
agagcctcccaaacttctacaactgctactcctccttggggatcaagatgccaatcccca
attgtaagccagaatacttccactgttgtctccatttccccatccagaccctcccaaaca
tttacagccacatctcctgtctctcctccttggggttcacgttcgcagtctcctgcactc
tcgcaggccagtttatcattcctcgccactaaacctctgtacacatcctctgccacctct
cctattcccccaaccaaagacagtcgctgcatgtcccccattgctaataacttagactct
aaggctaaccatcgcctcctggcaaagaacatcatcaatgcagccaaacgcaaaaacagc
ccctcccctggtgcactgagcggtcacagcctccccatctcacctctgggaaattcccac
catggctacgactgtcaaaaaccacccatcagccccttccagtcgcgggcattgggggcc
cagtcccctaccttcaccagccctcctcctaccccaacacagaggatctgctcccctgtg
aggctttacaacactcgctccctcaccgactctgatgcctctgttgagtctgaagactca
ggcctccggtcgcctggcctgcactcctacaacacctgcccccgcggctggggcggcagc
ctgagggtgaagagaggcaccgtctccactgacctgtga
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