Xiphias gladius (swordfish): 120785250
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Entry
120785250 CDS
T07311
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04137
Mitophagy - animal
xgl04144
Endocytosis
xgl04145
Phagosome
xgl04148
Efferocytosis
xgl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120785250 (rab5c)
04145 Phagosome
120785250 (rab5c)
04137 Mitophagy - animal
120785250 (rab5c)
04148 Efferocytosis
120785250 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120785250 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120785250 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xgl04147
]
120785250 (rab5c)
04031 GTP-binding proteins [BR:
xgl04031
]
120785250 (rab5c)
Membrane trafficking [BR:
xgl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
120785250 (rab5c)
Endosome - Lysosome transport
120785250 (rab5c)
Exosome [BR:
xgl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120785250 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
120785250 (rab5c)
Exosomal proteins of colorectal cancer cells
120785250 (rab5c)
Exosomal proteins of bladder cancer cells
120785250 (rab5c)
GTP-binding proteins [BR:
xgl04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
120785250 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
120785250
NCBI-ProteinID:
XP_039975742
LinkDB
All DBs
Position
LG3:19537108..19548031
Genome browser
AA seq
220 aa
AA seq
DB search
MAGRGGPARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQDAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGGAGAGGRARVGVDLQEAAPHGRSSQCCGGGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcgaggtggaccagcacggaccaacggcactgcagcaagcaacaagatctgc
cagtttaagctagtgctgttgggggaatcagcggtgggaaagtccagcttggtgttgcgc
tttgtcaaaggccagttccatgagtaccaggagagcaccattggagctgcctttctcaca
cagacggtatgtttggatgatacaacagtcaagtttgagatctgggacactgcaggacag
gaacggtatcacagcttggcacctatgtactacaggggagcccaggccgccatcgtggtc
tacgatatcaccaacacagatacattcacgcgtgcaaagaactgggtgaaggagctccag
cgacaagccagcccgaacattgttattgcactggcagggaacaaagcagacctggccaac
aagagagctgtagatttccaggacgcacaagcatatgcagatgacaacagtttgctcttc
atggagacctcagccaagactgctatgaatgtcaatgagatttttatggctatagccaag
aagcttcctaagaacgagcctcagggtggagcgggcgctggtggaagagccagggtcggc
gtggacctgcaggaagctgcaccacatggcagaagtagccagtgctgtgggggcgggaac
taa
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integrated database retrieval system