Xiphias gladius (swordfish): 120785310
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Entry
120785310 CDS
T07311
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03013
Nucleocytoplasmic transport
xgl03015
mRNA surveillance pathway
xgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120785310
09122 Translation
03013 Nucleocytoplasmic transport
120785310
03015 mRNA surveillance pathway
120785310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120785310
03041 Spliceosome [BR:
xgl03041
]
120785310
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
120785310
Spliceosome [BR:
xgl03041
]
Common components
Common spliceosomal components
Cap binding complex
120785310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Apolipoprotein
DUF1690
AAA_11
Vfa1
AAA_13
Importin_rep_6
WIT1_2_N
DUF2203
tRNA_bind_2
DUF1664
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
120785310
NCBI-ProteinID:
XP_039975855
LinkDB
All DBs
Position
LG23
Genome browser
AA seq
795 aa
AA seq
DB search
MSRRRHSDENDGGQAHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEAD
LPNYKNKILRILCAVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKNNL
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRSDWFVYVVLSCLPWV
GKELYEKKDVEMDRLLSQIEGYLKRRVKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPGHMPDAQYPMPRVVFRMFDYTDAPEG
PVMPGSHSVERFVIEENLHCIIKTHWKERKTCAAQLLSYPGKNKIPLNYHIVEVIFGELF
QLPSPPHMDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCIDRLINWFSHH
LSNFQFRWSWDDWADCLTVDLEKPKPKFVKEVLEKCMRLSYHQRIVDIVPPTFSALIPAE
PIYIFKYPDESASSLPGYAVSITVGNAIKNRASNEEILTILKEVPNPNQEDDDDEGESFN
PLKIDVFLQTLLHLAAKSFSHSFSALAKFHEILKTLTDSDEGKLHMLKVVYEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWLFSQDMAHEFTRLFTWEILHSTIRKMNKHVQKIQKELE
EAKDKLEKQQHKRRDSGDDEDMDKNSEDEEGQLEEQIERLQEKVESAQSEQKNLFLVIFQ
RFIMLLTEHLVRCETGSVDISTPWYKNCIERLQQIFLMHHVTIQQYMGTLENLLFTAELD
HHILAVYQQFCALQL
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggagacggcacagcgacgagaatgacggaggtcaggcccataaaaggaggaga
acgtcagagcccattgagatcgaagaccgtctggagtcactgatatgtcgcgtgggggag
aagagtacatcgtccctggagagcaacctggagggcctcgcaggtgtcttagaggcagac
cttccaaactacaaaaacaaaatcctgcgcattttatgtgctgtcgctcgcctcctacct
gagaagctgactgtgtatacaactttagttggcctcctcaacgccagaaactacaacttt
gggggcgagtttgttgaggccatgatcagacaactcaaggagacattgaaaaacaacttg
tacaatgaagctgtttacttggtgcggtttctgtctgacttggtcaactgccatgtgatt
gctgctccctcaatggtggccatgtttgaaaattttgtcagtgttactcaagaggaagac
gtaccacaggttcggtcagactggtttgtgtatgttgttctgtcctgtctgccctgggtc
ggtaaggagctttacgagaagaaggatgttgagatggaccgactcctcagccagatcgaa
ggctacctcaagagaagagtaaagacccatgtcccaatgctgcaggtgtggacagcagag
aagcctcatccacaggaggagtacctggactgcctttgggctcagattcagaagctaaag
aaagaccgatggcaggagcgtcacatcctacgcccatacatcgcctttgacagcgtgctg
tgcgaggctctgcaacacaacctgccacccttcaccccaccgggccacatgcccgatgcc
cagtacccaatgccccgggtcgtcttccgcatgttcgactacaccgacgcccccgagggt
cctgttatgcccggcagccactccgtggagagatttgtcattgaagaaaacctgcactgt
atcatcaagactcactggaaagagaggaagacatgtgctgcccagttactcagctatccg
gggaaaaataagattccgctcaactatcacatcgtggaggtgatctttggagaacttttc
cagctgccctctccgcctcacatggacgtcatgtacaccactctgctcattgaactctgc
aaactgcagccaggatcactgccgcaagttttggcccaagccacagagatgctgtacatg
agactggacaccatgaacactacctgcatagacagactaatcaactggttttctcatcat
ttgagcaacttccagtttcgatggagctgggacgactgggctgactgcttgactgtggat
ctagagaagcccaagcccaagtttgtcaaagaagttctggagaagtgtatgaggctttcg
taccatcagcggatagtggacatcgtccctcctaccttctcagccctcatccccgcagag
cccatctatattttcaaataccccgacgagagtgcttcttcgttaccaggttacgcagta
tccatcactgttgggaacgccatcaagaaccgagcgtccaacgaggagatcttgaccatc
ctcaaagaagtccccaaccccaaccaggaagatgacgatgatgaaggggagagcttcaac
cctctgaagattgacgtgttcctgcagactcttctccatctggcagccaaatccttcagc
cactccttcagcgccctcgccaagtttcacgaaatcttgaagaccctgaccgacagcgac
gaggggaagctgcacatgctcaaagttgtttatgaagtgtggaggaaccacccacagatg
atcgcagtgttggtggacaaaatgattcgcacccagatcgttgactgtgctgctgtggcc
aactggctcttctctcaggacatggctcatgagttcaccagacttttcacctgggagatt
ttgcactcaaccatccggaagatgaacaaacacgtccagaagatccagaaggagctggag
gaggccaaggacaagctggagaaacagcagcataagaggagggacagcggtgacgacgag
gacatggacaagaacagcgaggatgaggagggtcagctggaggagcagatcgagaggcta
caggagaaggtggagtcggctcagagcgaacagaagaacctcttcctcgtcatcttccag
cgtttcatcatgctgttgacggagcacctggttcgctgtgagaccggcagcgtcgacatc
agcacgccctggtacaaaaactgtatcgagcgactgcagcagatcttcctcatgcaccac
gtgaccatccagcagtacatgggaaccctggagaacctgctgttcaccgccgagctggac
caccacatcctggccgtctaccagcagttctgcgctctgcagctctga
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