Xiphias gladius (swordfish): 120785452
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Entry
120785452 CDS
T07311
Symbol
abca1b
Name
(RefSeq) phospholipid-transporting ATPase ABCA1b isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl02010
ABC transporters
xgl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120785452 (abca1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120785452 (abca1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xgl02000
]
120785452 (abca1b)
Transporters [BR:
xgl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
120785452 (abca1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
120785452
NCBI-ProteinID:
XP_039976120
LinkDB
All DBs
Position
LG23:233336..293169
Genome browser
AA seq
2119 aa
AA seq
DB search
MSVSTQLGLLLWKNFTYRRRQTLQLLVEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGILCNANNPCFRNPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
NLDGFKEVAQALQALQNSQSGFKLKHFLRDNETLSSFLLRNASFPEHSVQQIREADVNLE
RVLLTGFGVHLRDMCPRKGGVRRLEDFVTISDRQVSMLVQEVICQAPLAWLNHAEDHFLN
NLDFLKPIRRDVRSDPEAVRQVARATNNLLDSLGSLAVELASMKSWIDLRNEIIFLTQNA
TSSPSAMYQAISRIVCGHPEGGGLQIKSLNWYEDSNYKALFGNHNSSEDEPASLYDNSST
PYCNGLVKNMDSNPMSRMIWQALKPLLMGKILYTPHTPATQRVIHEVNRTFQELAVFRDL
GGMWEEMRPKVWNFMENSQQMDLIRTLLKNNITASFFHAQLSDTDWTVADVSNFLSRQAD
DPRPPGSTLTWREVFNETDQAIMSISRFMECVNLDKLEPVSSEERMINQSMVLLEDRKFW
AGIVFPDVPPNATELPAKLNYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYIWGGF
SYLQDVIEQGIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVA
IILKSVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISAGLLVLLLKKGNLLPYS
DPGVVFLFLGSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYIGF
GAKVFASLLSPVAFGFGCEYFALFEEQGVGIQWKNLVSSPLEEDDFSLRSAIIIMYFDSL
LYGVLTWYIEAVFPGQYGIPRPWYFPFTKSYWFGEKDGKSKVPLSRKGNPGAVCMEEEPA
HLEPGVYIENLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPT
SGTAYILGRDIRTELSAIRQSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEQQVKGEIE
QILQDTGLPHKRTSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDL
LLNYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLYLKNQLGTGYYLTLVKKE
PEPSLASCRNSSSTVSFTKKEEECASVSSSDAGLGSEHESEAATIENGPAASICEIPFIH
PDVSLVSSLILRHVPAARLVEDLGHELTYVLPYSAAKDGAFVELFKDLDGKLPDLGISSY
GVSDTTLEEIFLKVAEDNGVDTEVPSDGTLPVRRWRRTHAFGGGDHQSCLRPLTEDDDND
CNDSDGDPECKETDWLNCTDGKGTYQVKGWSLKKQQFVALMWKRFLYARRSRKGFFAQIV
LPAVFVCIALVFSLIVPPFGKYPSLELQPWMYEDQVTFISDDAPGDANMQKLLNAMLDAP
GFGTRCMDGHPIPEAPCTMGDEDWHTPDVPESVQQLFNSRNWTMEDPSPACFCSCDGRKK
MLPDCPAGAGGLPPPEMKLSATDTLQNLTGRNISDYLVKTYAQIIGKSLKNKVWVNEFRY
GGFSLGARSTQVLPPANEIDDAIERVRKIFELQKGAAADRFLDSLSGFINGLDTKNNVKI
WFNNKGWHSIGAFINVMNNGILRANLPEGKDPGSYGISAFNHPLNLTKEQLSQVALVTTS
VDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHMQFISGVQPLLYWMANFMWDMCNYIV
PATLVILIFVCFQQKAYVSSTNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTS
VNILIGINGSISTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADAL
ERFGENKFRSPLEWDMVGKNLFAMAVEGVVFFIITVLIQYRFCIKPRSVSKLTKLGALGE
EDEDVARERQRIVHGLGHGDILELRQLTKVFKRKQKPAVDRLCVGIPPGECFGLLGVNGA
GKTTTFKMLTGDTVVTSGEAFLAGKSILREIDEVHQNMGYCPQFDAINELLTGREHLELY
AILRGVPEKEVCDVAEWGIRKLGLVKYSDKAAGSYSGGNMRKLSTAMALIGAPPVVFLLL
LMVFISCHGDGLVVITLSH
NT seq
6360 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtctcaacacagctgggtctgctgctgtggaagaacttcacctacagacgacga
cagacgcttcagctcctggtggagatcgtctggccgctcttcatcttcttcatcctcatc
gccgtgcggctgaactacccaccgtacgaacaacatgagtgtcattttcctaacaaggcg
atgccgtcagccggcacgctgccctggattcagggaatcctctgcaacgccaacaatccc
tgcttcagaaacccgacgccgggcgagtctccgggcgtcgtcggcaacttcaacgactcc
ataatttctcgtctgttttcagacgccaagaagattcttctgtacagtcagaacgataaa
aacctggatggattcaaggaggtggctcaggctctgcaggcactgcaaaacagccaatca
ggcttcaagttgaagcatttcctgcgagacaatgagactctgtcgagctttctgctgaga
aacgcctccttccccgaacacagcgtccaacagatcagagaggccgacgtcaacctggag
agggtcctcctcacaggtttcggggtccacctgagggacatgtgtcccaggaagggcggc
gtgcggcgtcttgaggactttgtgacgatctcggaccgacaggtgtcgatgttggtccag
gaagtcatctgtcaggcacccctcgcctggctgaaccacgccgaggaccacttcctgaac
aacctggactttctcaaaccaatccggagggacgtgaggtccgaccccgaggctgtcaga
caggttgccagggcgaccaacaacctcctggacagtctgggttcactagcggttgagttg
gccagtatgaagagctggatcgatctgaggaacgagatcatcttcctgacacagaacgcc
acatcgtcgcccagcgccatgtaccaggcgatctccaggatcgtgtgcggtcaccccgaa
ggcggcggtctgcagatcaaatccctcaactggtacgaagacagcaactacaaggctctg
ttcggaaaccacaacagcagcgaggacgagccggcgtcgctgtatgacaactcctccact
ccgtactgtaacggtctggtgaagaacatggactctaacccgatgtccaggatgatctgg
caggctctgaagcctctgctgatggggaagatcctgtacaccccacacactcctgccaca
cagagggtcattcacgaggtaaaccggaccttccaggagctcgctgtgttcagggacctg
ggaggaatgtgggaggagatgagacccaaagtctggaacttcatggagaacagccagcag
atggacctgatcaggactctgctaaagaacaacatcaccgccagctttttccacgctcag
ctgtccgacaccgactggaccgtggccgacgtctccaacttcctgtcaaggcaggcggat
gacccccggccgccgggcagcaccctcacctggagggaggtgttcaacgagaccgaccag
gccataatgagcatctcgcgcttcatggagtgtgtgaacctggacaaactggagccggtc
tccagcgaggagcgaatgatcaaccaatccatggtgctgctggaggacaggaagttctgg
gcgggaatcgtgttcccggacgtcccccccaacgccacagagctaccggccaaactcaac
tacaagatccgcatggacatcgacaacgtggagaggaccaataagatcaaagacgcatac
tgggacccgggtcctcgtgccgacccatttgaggacatgcggtacatctggggagggttc
tcatacctgcaggatgttattgagcaaggcatcataagagcggtgacaggcaccaaggag
aagacgggagtttacatccagcagatgccgtacccctgctatgtagacgacattttcctg
cgggtgatgagccgctccatgcctctcttcatgactctggcctggatgtactcggtggcg
atcatcctgaagagtgtggtgtacgagaaagaggccagactcaaggagaccatgaggatt
atgggactggacaacggcatcctgtggttcagctggttcatcagcagcctgattcctctg
ctgatcagcgctggactgttggtgctgctgctcaagaaggggaacctactgccctacagc
gaccctggtgtggtcttcctcttcctgggatcctttgccgtggtgaccatcatgcagtgt
ttcctcatcagcacggcgttcgcccgggccaacctggcggccgcctgtggaggcatcatc
tacttcaccctctacctgccgtacgtgctctgcgttgcctggcaggactacattggcttc
ggagctaaagtctttgctagcctcctgtctccagtggcgtttgggtttggctgtgagtac
ttcgctctgtttgaggagcagggagtgggtatccagtggaagaacctggtgtcgagtcct
ctggaggaggacgacttcagcctccgcagcgccatcatcatcatgtacttcgactccctc
ctgtacggagtcctcacctggtacatcgaggccgtgtttccaggtcagtacgggatccct
cggccctggtatttccccttcaccaagtcctactggttcggagaaaaggacggaaagtcc
aaagtccctctgagccggaaaggaaacccgggagcagtgtgtatggaggaggagcctgct
cacctggagcctggcgtctacatcgagaacctggtgaaggtttaccgtcacggtaagaaa
ctggcggtggacggactgacactcggcttctacgagggacaaatcacctccttcctggga
cacaatggagccggaaaaaccaccacaatgtccatcctgactggtctgttccctcccacc
tctggtactgcctacatcctgggcagagacatccggacggagctgagtgccatcagacag
agtctgggagtctgtccgcaacacaatgtcctcttcagcatgctgacggtggaggagcac
atctggttctatgcccggctcaagggcctgtcggagcagcaggtgaaaggtgagattgag
cagatcctgcaggacaccgggctgccacataaacgcacctccaggaccagtactctgtcc
gggggcatgcagaggaaactgtctgtggctctggcctttgtcgggggatcaaaggtcgtg
atcctcgacgagcccacggcaggtgtcgacccgtacgcccgcagagggatctgggatctg
ctgctgaattaccgccagggtcggaccatcatcctgtccactcaccacatggacgaggcg
gacatactgggcgaccggatcgccatcatctcccacgggaagctgtgctgcgtgggctcg
tctctgtacctgaagaaccagctggggacgggttattacctgacgctggtgaagaaagaa
ccagaaccatcactcgcttcctgcaggaactcgtccagcactgtgtccttcaccaagaag
gaggaggagtgcgcctccgtcagcagcagtgatgcaggactcggcagcgaacatgaaagt
gaggccgctaccatcgagaatggccccgcagcttccatctgtgaaatccccttcatccac
ccggacgtgtctctggtctcgagtctgatcctgcgtcacgtccccgccgcccgcctggtg
gaggacctgggacacgagctgacctacgtcctgccgtacagtgccgccaaagacggagcc
tttgtggagctcttcaaagacctggatgggaagctgcccgacctcggcatctctagctac
ggagtgtccgacaccacgctagaggagattttcctgaaagtggctgaagataatggagtc
gacactgaagtgccctcagacggtacacttcctgttcggagatggaggaggactcacgcc
ttcggcggaggagaccatcagagctgcctgagacctttgacagaggacgacgacaacgac
tgcaatgactccgacggagaccccgagtgcaaggagacggactggttgaactgcaccgat
ggtaaagggacgtatcaggtgaaaggttggagtctgaagaagcagcagtttgtggctctg
atgtggaaacgatttctgtacgcccggcgctccaggaagggcttcttcgctcagattgtt
cttcccgctgtgttcgtctgcatcgctctggtcttcagtctcatcgtccccccgtttgga
aagtatccaagtctggagctgcagccctggatgtacgaggaccaggtcaccttcatcagc
gatgacgctcccggagacgccaacatgcagaagttattaaacgctatgctggacgctccg
ggcttcgggactcgctgcatggacggacatcccatcccggaggctccctgcaccatgggt
gatgaggactggcacactcctgacgtccctgaaagcgtccagcagctgttcaactccaga
aactggaccatggaggatccgtctccggcctgtttctgcagctgtgacggcaggaagaag
atgctgccagactgtcctgctggagccggaggtctgcccccacctgagatgaagctgagc
gccactgacacgctgcagaacctgacgggaagaaacatctccgactacctggtgaaaacc
tacgctcagatcatcggcaagagtttgaagaacaaagtctgggtgaatgaattcaggtat
ggaggcttctcattgggcgccaggagcactcaggtcctcccaccggccaatgagatcgat
gacgccatcgaacgagtcagaaagatctttgagttacagaagggagctgctgcagatcga
ttcctggacagtctgtcaggtttcatcaacggtttggacacaaaaaacaacgtcaagatc
tggttcaacaataaaggctggcacagtatcggagctttcatcaacgtgatgaacaacggc
atcctgagagccaacctgcccgaggggaaggaccccggcagctacggcatcagcgccttc
aaccatcctctgaacctgaccaaggagcagctgtcccaggtcgccctggtgacgacctct
gtggacgtcctggtgtccatctgtgtgatctttgccatgtccttcgtcccggcgagcttc
gtggtcttcctcatccaggagagggtcagtaaggccaaacacatgcagttcatcagcgga
gtgcagccgctgctctactggatggccaacttcatgtgggacatgtgtaactacatcgta
ccggcgacgctggtcatcctcatcttcgtctgtttccaacaaaaagcctacgtctcctcc
accaacctgccggtcctcgccctgctgctgctgctctacggctggtcaatcacaccgctc
atgtacccggcctccttcttctttaagatccccagcacggcgtacgtcgtccttaccagc
gtcaacatcctcatcggcatcaacggcagcatctccaccttcgtcatggagctgttcgga
aacaacgagatcggaggaatcaacgacatcctgaagaacgtcctcctcatcttccctcac
ttctgtctcggtcgaggactcatcgacatggtgaagaaccaggcgatggccgacgccctc
gagagattcggtgagaacaagttccgctctcctctggagtgggacatggtcgggaaaaac
ctgttcgccatggctgtggagggagtggtgttcttcatcatcactgtcctcatccagtac
agattctgcatcaaacccaggtcggtcagtaaactcaccaaactgggagcgctgggagag
gaggacgaggacgtggcccgagagagacagaggatcgtccacggcctcggacacggagac
atcctggagctccgacagctcaccaaggtcttcaagaggaagcagaaaccggccgtggat
cgactgtgtgtcgggattcctcctggagagtgtttcggccttctcggtgtgaacggagcc
ggaaagacgacgacgtttaagatgctgacaggagacacggtggtgaccagcggagaggcc
ttcctggctgggaagagtatcctgagggagatcgatgaggtccatcagaacatgggttac
tgtcctcagtttgacgccatcaacgagctgctgacgggaagggagcatctggagctgtac
gccatcctcagaggagtccccgagaaggaagtctgtgacgtggcagagtgggggatcagg
aagctgggtctggtgaagtactctgataaagcagcaggaagttacagcggaggaaacatg
aggaaactgtccacagccatggctctgatcggagctccacctgtcgtcttcctgctactt
ctcatggtcttcatcagttgtcatggagatggtttagtggtcatcacgttatcgcattaa
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integrated database retrieval system
