Xiphias gladius (swordfish): 120785654
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Entry
120785654 CDS
T07311
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120785654
Cell adhesion molecules [BR:
xgl04515
]
Cadherins
Protocadherins
120785654
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
7TM_GPCR_Sri
Peptidase_S55
Motif
Other DBs
NCBI-GeneID:
120785654
NCBI-ProteinID:
XP_039976461
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Position
LG23:complement(15662892..15665394)
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AA seq
814 aa
AA seq
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MSCAWKIARRGRCQALVFILCLFKLSSVTGQARYSIPEEQAEGSFVGNIAGDLGLDVARL
KSGKARIITKGSRQYVDLNRDKGTLVIKERIDREELCGKTTPCSFSFEVILENPIQLYRV
TVEVIDINDNSPLFPKDAVNLKIVENAASGTRFSLESADDPDVGINDIQKYTLKPSDNFK
LAVQSQPDGGRFIEMVLQNPLDREKEETHTLVLIASDGGEPHRSGTARIHITVLDANDNA
PVCSQPVYKADVKENSPEGTVVTTVSANDADKGVNGEVTYSIAHVAREAKQLFEVNVKTG
QIKVAGVLDFEKSKTYQLNVQASDHGGFTDTCKVIIQIIDENDNVPTIQLMSFSNSISED
SAPGTTIAVVNVDDEDSDGNGVVKCSINSDVPFKIESSLTGYYTIVTENFLDRESIPEYN
ITITVSDQGSPPLSSSKNINVKVSDVNDSPPRFDKSEYSESIPENNSPGFSVFTLSASDA
DWGQNARVSYFLEEKQINGVAVSSLVSVNSETGAIHAVRSFDYEQIKWFEFNVTARDAGS
PPLSSVATVKIRIQDQNDNPPQVLYPVQTGGSLVAEMVPRSADVGYLVTKVVAVDVDSGQ
NAWLSYKLQKATDRALFEVGLQNGEIRTIRQVTDKDAVKQRLTVIVEDNGQPSRSATVVV
NVAVADSFPEVLSEFTDFPHDKEYNDNLTFYLVLALAVVSFLFITCLVVIISVKIYRWRQ
SRILYHSSLPVIPYYPPRYSDTLGTGTLQHVYNYEVCRTTDSRKSDCKFGRAGSQNVLIM
DPSSTGTMQRLQSEKSILDEPDSPLEVGLLIHRF
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgcgtggaaaatcgctcgcagaggccgatgccaggcgctggttttcattctt
tgtcttttcaagctgagctcggtgactggacaggctcggtattccataccagaggagcag
gcagaagggtcttttgttggaaacattgctggagatttaggcttggatgtggcgaggctc
aagtcaggtaaagctcgtattattacaaaaggaagccgacagtatgtcgatttaaaccga
gacaaaggcacccttgttattaaagagcgaatcgaccgagaagagctttgtgggaagacg
acgccatgtagctttagtttcgaggtcattttggaaaatccaatccagctttatagggtg
acagtggaggtgatagatattaacgataacagcccgttgttcccaaaggatgcagtcaat
ttgaaaattgttgaaaatgctgcatcagggactcgcttctcattggagagtgcagacgac
cccgatgttggcattaatgatattcaaaaatacacccttaaaccctcagataatttcaaa
ttggcagtgcagagccaaccggatggaggcagatttatcgaaatggttttacaaaacccg
ttagaccgggagaaagaggagactcacacactcgtgctgattgcttcagatggcggtgag
ccacatagatcaggaacagcgcgtattcatatcactgtgctagatgctaacgataatgcg
ccagtgtgtagccagcctgtttataaagcagatgtcaaggagaattctcctgaaggaaca
gtggtaaccactgttagtgcaaatgatgcagataaaggagtcaacggtgaagtaacttat
tccatagctcatgttgcaagagaagcgaagcagcttttcgaagtaaatgttaaaactgga
cagattaaagttgcaggtgtactagatttcgaaaaatctaagacttatcaattaaacgtg
caagctagtgaccacgggggctttacagacacgtgcaaagttattattcaaataattgat
gaaaatgacaacgtcccaacaatacagctgatgtcattttctaactcgatttcggaggat
tcagccccaggtacaaccatagctgtcgtgaatgtcgatgacgaagactctgatggcaac
ggtgttgtcaaatgctccattaactctgacgtaccattcaaaatagagtcttcattaact
ggatattacaccatagtaaccgaaaacttcttagacagagaaagtattcctgagtataac
atcaccataaccgtctcagaccaaggctctccgcctctgtcgagcagtaaaaacatcaat
gtaaaagtgtctgacgtgaatgacagcccacccagatttgataaatcagaatacagtgag
agtataccagagaacaactctcctggattttctgtgtttactctcagtgccagtgatgca
gactggggccagaacgcccgggtttcttactttctggaggagaaacagattaatggggta
gcagtgtcttctttagtgtcagtaaattcagaaacaggtgccattcacgcagtgaggtcg
tttgattatgagcaaatcaagtggtttgaatttaacgtaaccgctcgtgatgctggatcc
cctcctctgagttcggtggctacagttaaaatacggatccaggaccagaacgacaacccc
cctcaggttctgtatccagtccagaccgggggctctctggtggctgaaatggtgcctcgt
tcagcagatgtgggctatctggtgactaaagtggtggctgtcgatgtggactctggacag
aatgcctggctctcctataaactgcagaaagccacagacagggcgctgtttgaagtgggc
ttacagaatggagaaatcagaacaatccgccaagtcaccgataaagatgctgtgaaacag
agactgactgttatagtggaggacaacgggcagccctctcgttcagctacggtcgttgtg
aacgtggcggtggcggacagcttccctgaagtgctgtcggagttcactgactttccgcac
gacaaggagtataatgacaacctgactttttacttagtgttggctctggctgtggtttcc
ttcctcttcatcacgtgtttagtggttattatatcggtgaaaatctacagatggagacag
tctcgcatcctgtatcactccagtctccccgtgattccgtattatccaccacgttactca
gacactttggggacagggactctccaacacgtgtacaactacgaggtgtgcaggacgact
gactccagaaagagtgactgtaagttcggcagagctggtagtcagaacgtgttgataatg
gaccccagttctacagggacgatgcagcggctgcagagtgaaaagagcatcctggatgaa
ccagactctcctctagaggttggtttattaatccatcgtttttaa
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