Xiphias gladius (swordfish): 120785677
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Entry
120785677 CDS
T07311
Name
(RefSeq) protocadherin Fat 4
KO
K16669
protocadherin Fat 4
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120785677
Cell adhesion molecules [BR:
xgl04515
]
Cadherins
Cadherin related
120785677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Laminin_G_2
Laminin_G_1
EGF
Cadherin_2
Fibulin_C
EGF_TEN
hEGF
EGF_CA
Cadherin_4
EGF_2
HNF-1B_C
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
120785677
NCBI-ProteinID:
XP_039976486
LinkDB
All DBs
Position
LG23:complement(4738940..4841352)
Genome browser
AA seq
3308 aa
AA seq
DB search
MVIEEVTHLPGPPGRWSLRVNLWVEITLQDVNDNPPVFPNDILDVTIEENVGDGFKIMQL
TATDADEGPNALVTYTIISGADDSFRIDPESGDLIATKKLDRERRSKYSLLVRADDGKQS
SDMRLNITVKDVNDHTPKFSRSTYSFDIPEDMAPGSIVAAILASDSDSGVNGEVTYSLEE
DDEDETFLLNPVTGVFNVTRPLDYETQQYYILTAKAKDGGEQASTVRVYFNVLDVNDNPP
IFNTSVYSTSVSESLPLGSSIITVGASDADDGPNAQLLYKIGSGDPQGHFVITKEGVLQT
KKALDRETQSFYNLVITVNDLAPPPMTRFTSTAQVSIILLDVNDCSPTFTSQKMTYIQEN
TPVDTVVFTAQATDADSGPNSYVEYSLRGPYGNKFRIGTVDGDVRLVGELDREELSNYTL
RVVATDKGEPPLSSTMDVTMMVLDVNDNTPSFSQNIYDIEIEENTLTGTDVIQVFASDAD
EGTNGQIRFSISGGNTNSDFRIDSVTGVISVAKQLDREERSSYSLVVQATDRGSSPRVDR
ATVNIVLLDVNDCSPVFELSPYTVNVQENLENLPKHILQVVARDDDQGANSQLSYMLSGG
NDEGAFSLSSSGQLSLTQTLDREAQGKYILLITATDSGSPPLSGTGTVTVLVDDVNDNVP
VFTSSTFHTTIMEDAPTGTDVLLVNSSDADVGVNGVISYSLTGGHGQFSINPATGQIITS
SLLDREDRANYQLLVVATDGGQPEGLSSSATVSVTVADINDNPPRFHHHPYVTHIPASTA
AGSLVFAVTVTDEDSSSNAQLHYSLMGRNSEKFKIDPVRGAITANERLTGSSEVTLTVRV
KDSGANPKTDTTTVTVRFVTGGNFPVIKVKEHVFTFAESQPTNHVVTMVTGSSMRGGPLS
YYIASGNLDNAFHIDQLSGELSIRHSLDYEHIQKYVLWIEARDQGFPPYSSYEKVEITVL
DVNDNHPVFDKDPFHAEILENLSPQRVLMVSAVDLDSGQNGQLEYAIIDGNKENSFSINR
ATGEIRTTRPLDREKVAQYTLKVKATDRGSPPKNTEVKVIISVLDVNDNAPRFSKIFSAT
VAENAPVGYTVTRVTTTDEDAGSNAISRYSITDTSLPFNINPNTGDITISRPLNREDTDH
YIVKVSAHDSGWTVSTDVTIFITDINDNAPRFGRPSYYLDYPELTEVGSLVTQVSATDPD
VGFNGKIFYFIRSQSEYFRINASSGEIFVKQQLKYQNSTGASSININRHSFIVTASDRAV
KPLMSETTVIVNIVDSNDNPPEFDSPGYFTPVTKSVKVGTRLIRVVAQDKKDFGLNSEVE
YLITGGNSSSKFKLDKTSGWISVASSLTSDMKKIFLIDITASDRGNPPLSARTSVRIAVT
EENHHTPEFSQSQISATIPESLAVGTAIRTLSARDKDKEMNGLITYNITSGNNKGLFVLN
SKTGVLSLAHPLDFEEKQQHELRVSATDGGWIAKTSYVTVTVHVTDVNDNPPVFDPDEYF
PIVQENVPSGTTVVKMNATDRDSGANAVMAYVIQSSDSDLFVIDPNTGTITTQGFLDYEA
KQVYHLTVKAFNVPDEERCSFANVNIQLKGANEYVPRFVSKQYYFEISEAAPKGTVVGEV
FASDRDQGDDGVVYYLIFGNSRKKGFGINKKTGQIYVTGTLDREKEEKISLKVLAKNAGS
IRGADIDEVFVNITILDANDPPVFTQELYDVQVSEGLSTGGLVTFVSAEDSDSVPSWSRF
SYSIAPELNNNVFTINPKTGQVSVAAELDRETTPVYNLTVVAVDTGTPPATGSATVIVNL
EDINDNGPTLTTAYAEVMENQRAGTAVTTLTASDPDLTPNQGPFLYSLLSSGSANSYFSL
SSAGVLTTSREIDREQISDFYLSVVIKDSGVPQMSSTGTIHVKINDQNDNPSEPRSMEIF
VHYFGNMFPGGSLGDVKPQDPDIQDRFHCSLIPPSSGLFSIPTGTCNLNSKARSTDGTFE
ITIRSSDGVHGSVSNTARVLFMGFTNATVDNSILIRLNSQGVKNFLTNHYLSFLRIANSQ
LAGLGTGVLLYGAFELNNQTFLMAAVKRGHGQYVNPSGVATFFQSIKDILYRQSGVQIDA
VDHDPCTHNPCQNGGSCKRRLSVGPDMKTEESVPVILVSNHPLQPYACSCRPGYTGALCE
TDIDECQPSPCHNGGTCHNLVGGFSCTCPEGFTGMACERDINECLSNPCKNGALCQNFPG
GFNCLCKSGFAGKTCDSIINHCECNPCFNGGSCQNRVDGYYCHCPFGVFGKHCELNSYGF
EELSYMEFPSLDPNNNYIYIKFATLKSNALLMYNHDNQTGDKAEFLALEIFEGRMRFSFN
LGSGTYKLMTMIKVADGQFHTVIARRAGCNKNIQGKSERCHMAASLTVDLCGDDQEPGYC
AVSNVAVNTDWILDVQPNRLSVGGVRSIEPVLHRRGQVATHDFVGCIMEFAVNGRPLEPS
QALASRGILDRCPRLEGACTASPCRHGGTCLDHWSWQQCQCVDGFTGKFCEKYMTADTAL
SLDGTGRLDYSLKPGPKRDVLLSQSLQGASSDPAGPSSLEVKFRTRSKTGTLLHVRETSN
YTSVKLRNGNIHYISDAGVGGKVERTVGDAVLSDGQWHTLRLVKNGSATVLQVDSGHPRV
IQHATQDFGGLGVLTFSLGGIPPGPAQQKTGAGFDGCLAYVKYNGENLPFTGEHSLVTLT
KTSSSVKIGCRGPNLCESSPCWDGLMCVNQWYTYQCVPPGDCASNPCQNHGSCVPDSRSG
FTCVCSEFYTGKTCETLVACLGVQCPQGTVCKTANNGGFVCSPTPTVATMVLPIWAVPAI
VGSCATVLALVVLSLILCNHCKDRNKTKVPKEPKEKKPKEKKKKKKKKGSENVAFDDPDN
IPPYGDDMTVRKQPEGNPKPDIIERENPYLIYDETDIPHNIETVPSAPCAPCNVPEADIE
HYDIDNASSIAPSDADIIQHYKQFRSHTPKFSIQRHSPLGFARQSPLPLGATSYTYQPQY
TQALRSTPLSHAHSACPTPNPLSRHSPAPFTKPSSFYRNTPTRELNLARREGSPLDLHND
MCQPPPMFNYATRLGRRSKSPQTMASHGHTSRPGSRLKQPIEQIPLETGPPVGLSIEEVE
RLNTPRPRNPSICSADHGRSSSEEDCRRPLSRVRNPADGIPAPESSSESDSHDSFTCSEM
EYDRDKPVSYSSRVPKLSQVNESDADDEDYSGRLKQRRYSSRRAEGGPGVAQMPPSDQHY
TLPHKLGQQAGGFNWDNLLNWGPGFGHYVDVFKDLALLPENAAAKDIEMNSGDGSVTILN
EGEAEQYV
NT seq
9927 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcgaggaggtgacgcatctgccaggccctcctggtaggtggtcgctccgggtg
aacctgtgggtggagatcacgctgcaggacgtcaatgacaacccgcctgttttccctaat
gatattcttgatgtgaccattgaggagaacgttggagatggcttcaagataatgcagcta
acagccacggatgcagacgagggtcccaatgctcttgtgacgtacaccatcatcagtggg
gcggacgacagtttccgcattgacccggaatccggtgatctgatcgccaccaagaaactg
gatcgggaacgccgttcaaaatattcccttctggtgcgtgcggacgatggaaaacagtcg
tctgacatgaggctgaacatcaccgtcaaggacgtcaatgaccacacgcccaagttctcc
cgttcaacgtactcgtttgatatccctgaagacatggcaccaggctccatcgtggcggcg
atcctcgccagcgactctgactcaggggtgaatggagaggtcacctactcgctggaggaa
gacgacgaggacgagacgttcctcctgaacccagtgacaggggttttcaacgtgacgcgt
cccctggactacgagactcagcagtactatattctgacagccaaggccaaggatggcggg
gagcaggccagcacagtcagagtgtatttcaacgttctggacgtgaatgacaacccgccc
atctttaacaccagcgtgtacagcacgtctgtctctgagagtctaccgctgggatccagt
atcatcactgtcggggccagtgatgctgatgatggcccaaatgcccagctcctctacaaa
attggctctggtgatccccagggtcactttgtcatcaccaaggaaggagtccttcaaacc
aagaaggccttggacagagaaacacaatccttctacaacctggtgatcacagttaacgac
ctggctccacctcccatgacccggttcaccagcactgctcaggtgtcgatcattctcctg
gacgtcaatgactgctcgccaactttcacctcccagaagatgacctacatccaggagaac
acacctgtggacacggtggtgtttactgcccaggccacagacgctgacagtgggcccaac
agctatgttgagtattctctcagaggaccctatggtaacaagttcagaattggcacagtt
gatggagatgtcaggttggttggggaactcgaccgggaggagctttccaactacaccctc
agagttgtggcaacagataaaggagaaccccctctgtcttcaaccatggatgtgactatg
atggttcttgacgtcaacgacaacacgccaagcttctcgcaaaatatctatgacattgag
attgaagagaacaccttgactgggactgatgtcatccaagtgttcgccagtgatgccgac
gagggcaccaacgggcagatacgattttctatctcaggaggcaacaccaactctgatttc
aggattgattcagtcacaggggtgatttcagtggccaagcagctggaccgtgaagaacgt
tcttcctattcactagttgtccaagctacagaccgcggcagcagccccagggtggaccgt
gctacagtcaacattgtgttgctggacgtcaatgactgctcacctgtgtttgagctctct
ccttacaccgtcaatgttcaggagaacctggagaaccttccaaaacacattctgcaggtt
gttgccagggacgacgaccagggcgccaacagtcagctgagctacatgctaagtggcgga
aatgacgagggcgcgttcagcctgtcgtccagcggtcagctgagcctgacccagactctg
gaccgtgaggctcaggggaaatacatcctgctgatcacagccacagactcaggttctcca
cctctgagcggcacggggacggtgaccgttctggtggacgacgtgaacgataacgtccct
gttttcacctcctccaccttccacaccaccatcatggaggacgccccgacagggaccgat
gtgctgctggtcaacagctcggatgcagacgtgggcgtcaatggtgtcataagctacagc
ctgaccggaggacacggccagttctctatcaaccctgctacaggacagattattaccagc
tccctgcttgaccgagaagacagggctaattaccagctgctggttgtggcaaccgatggg
gggcagcccgagggcttgtccagctccgccaccgtgtccgtgacggtggcagatatcaat
gataaccctccacggttccaccaccacccctacgtcacccacatcccggcctctactgca
gcagggtctttggtctttgctgttacggtcactgatgaggactcgagttccaatgcccag
ctgcactactccctgatggggcgcaactctgagaaattcaagatcgacccagtcagaggc
gccatcactgccaatgagaggctgacgggaagctcagaagttaccctcacagttcgagta
aaagacagcggagctaatcccaaaactgatacgactactgtgactgtccgcttcgttact
ggaggaaacttccctgtcattaaggtgaaggagcatgtattcacgttcgctgagagccag
ccaacaaaccacgttgttacaatggtgactgggtcttctatgaggggtggacctctgtca
tattacatcgccagcggcaacctggataatgcttttcatattgaccagctgtcaggcgaa
ctgtcaatcagacactcactggattatgaacacattcagaagtatgttctctggattgag
gccagagatcagggcttcccaccttactcctcttatgagaaagtggaaataactgtgctc
gacgtgaacgataatcacccggtgtttgataaggatcctttccatgctgaaatactggag
aacctttcaccgcagcgggtgctgatggtctctgctgttgatctggacagtgggcaaaat
ggacagctggaatatgccatcattgatggcaacaaggagaacagtttcagcattaatcga
gcaactggcgaaatacgaaccaccaggccactggaccgggagaaggtggcccagtacact
ttgaaagtcaaagccactgaccgggggtcgccacccaaaaacacagaagtcaaagtgata
atcagtgtactggatgtgaatgacaatgcccccaggttttccaaaatctttagtgctaca
gtggctgaaaatgccccggtgggttacactgtcaccagagtaaccaccacagatgaggat
gctggttccaatgccattagccgatattcaattacagacacaagccttcctttcaatatt
aatccaaatacaggagacataacaataagtaggccactcaatagagaagacaccgatcac
tacattgtcaaagtgtctgcccatgactctggttggacagtaagcacagatgtcaccata
ttcataacggatattaacgataatgcccccagatttggtcgtccctcttactatctggac
taccctgaactcacagaagtgggctccctggtcacacaggtgtctgccacagatcctgat
gtgggtttcaatggcaaaattttctatttcattcggtcccagtccgagtatttcagaatt
aatgccagctctggagagatatttgtgaagcagcagttaaaatatcagaactcaacaggt
gctagtagtataaatataaatcgccacagcttcattgtcacagcctcagaccgggcagtc
aagcctttgatgagtgagacaacagtaattgtaaacattgtagacagtaatgataatccc
cctgagtttgattcgcctgggtactttactcctgtcaccaaaagtgtcaaggttggcacc
agactgattagggttgtagctcaagacaaaaaagactttggccttaattctgaggttgag
tacttgataacaggtggaaacagctctagtaagttcaaactggataaaacaagtggatgg
attagtgttgcctcctctcttacatctgatatgaaaaaaatcttcctcattgacatcaca
gcgagtgacagaggaaatcctcctttgtcagcacgaacgtcagtgcgaattgcagtcaca
gaggaaaaccaccacacacctgagttctcacaaagccaaatctcagctactatacctgaa
agccttgctgtgggaacagcaataaggaccctgtctgccagagacaaagataaagaaatg
aatggccttatcacttacaatattacgtcaggcaacaataagggtctgtttgtacttaat
agtaaaactggagtgttatccctagctcaccctctggactttgaagagaagcaacaacat
gagcttagagtttcagccactgatggtggctggattgcaaaaacaagttatgtgaccgtc
acggtacatgtaactgatgtgaatgacaaccctcctgtgtttgatcctgacgagtacttc
cccattgtacaggagaacgttcccagtggcaccactgttgtcaaaatgaatgccacagac
cgtgattcaggggctaatgcagtcatggcttacgtgatacagtcatcagacagtgacctc
tttgttattgacccgaacacgggcaccatcaccacccagggcttcttggattacgaggct
aagcaggtctaccacttaacagtgaaggccttcaatgtcccagacgaggagcgctgcagc
ttcgccaatgtcaacattcagctaaagggagccaatgaatacgtaccccgctttgtctcc
aaacagtattactttgaaatctctgaagctgctccaaaaggcacagtggtcggggaagtg
tttgccagtgatcgagaccaaggagatgatggagtggtttactacctcattttcgggaac
agcagaaagaaaggctttggtatcaacaagaaaacgggccagatttatgtcacaggtaca
ctagaccgtgagaaagaggaaaaaatttcactgaaggtgttggccaagaatgcaggaagc
atccgtggggcagatattgacgaagtgtttgtaaatatcacaattctcgatgccaacgac
cctcctgtttttacccaagaactgtatgatgtgcaggttagtgaaggtctctcaacaggt
ggtctggttacctttgtgagcgctgaggactcagattctgtcccgagctggagcagattt
tcttactccattgctcctgagcttaataacaatgtttttactatcaacccaaaaactggc
caagtgtctgtggctgcagagctggacagagaaacaactcctgtgtataatctaactgtt
gtagctgtggatactggcacccctcctgcaaccggaagcgccaccgtgattgtgaatctg
gaggatatcaatgataacggtccaactttgacaaccgcttacgctgaagtaatggaaaac
cagagagctggcactgcagttacgacactaacagcttctgacccagatctaacacccaac
caaggccccttcttatacagcctcctcagttctggctctgccaacagctacttcagcctc
agttcagctggagtgttaaccaccagtcgggagatcgacagagaacagattagcgacttc
tacctttctgttgtgatcaaggactctggtgtgcctcaaatgtcctccacaggaacaatc
catgtcaaaataaatgatcagaatgacaacccttcagagccgaggtccatggaaatcttt
gtccactactttgggaacatgtttcctggaggttctttgggagatgtcaaaccccaagac
cctgacattcaagacaggttccactgctccctaatccctccatcctctggtctgtttagt
atcccaactggaacgtgcaacctcaactctaaagcccgctcaacagatggaacatttgag
ataaccatccgtagcagtgatggtgtccacggttcagtcagcaatacagccagagtcctc
ttcatgggcttcactaatgccacagtggacaacagcatactcatccgtctcaactctcaa
ggagtgaaaaacttccttaccaaccactacctcagcttcttacgcattgccaactctcag
ctagcaggactaggcactggggtgctgctttatggagcatttgagctcaacaatcagact
ttcctgatggcagctgtgaaacggggccatggacaatatgtcaaccccagcggcgtggcc
acattcttccagagtatcaaagacattttatatagacagagcggggtgcaaatagatgcg
gtggaccatgatccttgcacacataacccgtgccagaatggaggcagctgcaagcggcgt
ctcagtgtcgggcctgatatgaagacagaagaaagtgtcccagttatccttgtttccaac
caccccctgcagccctatgcctgcagctgcaggccaggatacacaggagctctgtgtgag
acagacattgacgagtgtcagccatcaccctgtcacaatggcggcacctgccacaatttg
gtgggaggtttctcctgcacctgtcctgaaggtttcactgggatggcctgtgagagggat
atcaacgaatgcctttccaatccttgcaagaacggggcgctgtgccagaacttccccggc
ggcttcaactgcctctgcaaatccggctttgcaggcaaaacttgtgattccatcatcaat
cactgtgagtgtaacccttgttttaatggcgggtcctgtcagaatcgggtggatggatat
tactgtcattgtccatttggggttttcggcaaacactgtgaactgaacagctatggtttt
gaggagctgtcctacatggaatttccgtctctggaccccaacaataactacatatatatt
aagtttgctaccctgaagagtaatgcgctgcttatgtacaaccacgataaccagaccgga
gacaaggcagagttcttggctctggagatcttcgagggacggatgcgtttctccttcaac
ctgggaagtggaacttataaattgatgaccatgataaaagttgcagatgggcagttccac
acagtcatcgccaggagagcgggatgtaacaaaaacattcagggaaaatctgagagatgc
cacatggctgcatccttgaccgtggacctgtgcggtgatgaccaggaaccaggctactgt
gctgtgagcaacgtggcagttaacactgactggatcctggacgtgcagcccaacaggctc
tcggtgggaggtgtcaggtcaatagaacctgtccttcatcggcgcggtcaggtcgccacc
cacgactttgtcggctgcatcatggagtttgccgtcaacggccgcccactggagcccagt
caggcgttggcatcgcgtggcatccttgacagatgtccaagactggaaggagcctgcacc
gccagcccctgtagacacgggggcacctgtttggaccactggtcttggcagcagtgccag
tgcgtggatggcttcactggcaaattctgtgagaaatacatgacagcagacactgccctg
tctctggatggtaccggccgcctggactactccctgaaaccgggccccaaacgtgacgtc
ctgctcagtcagtcactgcagggcgcgtcctctgaccccgccggtcccagcagcctggag
gtcaagttcaggacgcgcagcaagaccggcaccctgctgcatgtgcgggagaccagcaac
tacacctctgtgaagctgaggaacggcaacatccactacatctcagatgcgggcgtaggg
gggaaggtggagcggaccgttggggatgcagtgttgtcagacggtcagtggcacacactc
cggctggtcaagaacggctcagccaccgtgctccaggtggacagcggccatcccagggtc
atccagcatgccacccaggactttggaggtcttggtgttttaaccttttccctgggaggg
atcccgcccggacctgctcagcagaaaacgggggcaggtttcgatggctgcttggcttat
gtgaagtacaatggggagaacctgccatttactggtgagcacagccttgtcaccttaact
aagaccagctcatctgtaaagatcggctgcagaggtcccaacctatgtgagagcagtcca
tgctgggacggcctgatgtgcgtcaaccagtggtacacgtaccagtgtgtcccgcccggt
gactgtgcttctaatccctgccagaaccatggcagctgtgtgccagactcccgctcaggt
ttcacttgtgtctgctccgagttctacacaggaaagacttgtgagaccttggtggcctgt
ctgggtgtccagtgtcctcagggtactgtctgcaaaacagccaacaatggcgggtttgtc
tgcagccccaccccaactgtggcgacaatggtcctccccatttgggcggtgcctgctatt
gttggcagctgtgccactgtcctcgccttggtggtcctcagcctgatcctgtgcaaccac
tgcaaggaccgcaacaagaccaaagtgccaaaggagcccaaggagaagaaacccaaggaa
aagaagaagaagaaaaagaagaagggtagcgagaacgtagctttcgatgacccagataac
atcccgccatatggagatgacatgacggtacggaaacaaccagaagggaacccaaaaccg
gacatcattgagagggagaatccatatctgatctatgatgaaacagacattccccacaac
attgagactgtcccgagtgctccctgcgccccctgcaatgtcccagaggcagatattgag
cactatgacatagacaatgccagcagtatcgctccttcagatgcagacatcatccagcat
tacaaacagttccgtagccacacacccaagttctccatccagagacacagtccactgggc
tttgccagacagtcccccttacccctcggagcaacaagctacacctaccagcctcagtac
acccaagcactgaggtccaccccgctcagccacgcccactcagcctgccccaccccaaac
cctctatccagacactcaccagcaccgttcaccaagccctcctccttctaccgaaacact
ccaaccagagagctcaaccttgctcgccgtgagggcagcccgctggacctgcacaatgac
atgtgccagccgccaccaatgttcaattacgccacccggctggggaggcgcagcaagagt
ccacagaccatggccagccatggccacacttccaggcccggcagtcggctgaagcagccg
atcgagcagatccccctggagacggggcctcctgtgggtctgtccattgaggaagtggag
cggctgaacactccacgcccacgcaaccccagcatctgcagcgctgaccacgggcgctcc
agctcagaggaggactgccgcaggccactgtcgagggtccgcaaccctgctgatggaatc
ccggccccagagtcctcttcagaaagtgactcacatgactccttcacctgctcggagatg
gagtatgaccgggacaaaccagtttcttacagctcccgggttccgaagctctcacaagtc
aacgagtcagacgctgacgacgaggactacagcgggaggctcaagcagaggcgttactca
agtcggagggcggaaggagggcctggcgttgcccagatgccccctagtgaccagcactac
accctgccccacaaactgggccagcaagctgggggcttcaactgggacaatctcttgaac
tggggccccggctttggacattatgtagacgtgttcaaggacttagccttgcttcctgag
aacgccgcagcaaaagacattgaaatgaacagtggggatggttcggtgaccattctaaac
gaaggagaagctgagcaatatgtatga
DBGET
integrated database retrieval system
