Xiphias gladius (swordfish): 120785678
Help
Entry
120785678 CDS
T07311
Name
(RefSeq) protocadherin Fat 4-like
KO
K16669
protocadherin Fat 4
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120785678
Cell adhesion molecules [BR:
xgl04515
]
Cadherins
Cadherin related
120785678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
Cadherin_4
RibLong
Motif
Other DBs
NCBI-GeneID:
120785678
NCBI-ProteinID:
XP_039976488
LinkDB
All DBs
Position
LG23:complement(4842356..4850825)
Genome browser
AA seq
1763 aa
AA seq
DB search
MLWTLSRYSASSQVRQEFQVLEEQPVGTYVGTIETKPSFTYRFSENHKLFAINGTTGDIY
TSSVIDREVLQSDVINVVVLSSQPTYPTEVRIVVLDINDNSPVFPDASIVVSFKEDASSG
RQVILDTATDSDIGSNGVDHTTYRIVKGNEQRKFRLDITVNPSGEGAFLHLVSTGGLDRE
VTPFYQLLVEVEDKGDPKKFGYLQVNVTIQDINDNPPIFEQDQYQASVFEDAAVGSSVLQ
ITASDQDEGANAEIRYLLDEGTPFQIDPKAGTIIIKEGLDYESKKEYSLTIHAVDNGVPS
LSGRTEATIKLLDVNDNDPVVKFRYFPTTSKFASVDENAQIGTVVALLTVSDSDSPTANG
NISVSILGGNEQRHFEVHTSPVPNLSLIKVASVLDRERISSYNLTVSVSDNGKPVARSSF
ASLVIFVNDINDHPPIFEETLYRVDISEDIPKGSYIKGVSATDGDSGQNANLRYSLVSGN
TLGWFSISENSGLVTSAALLDREIASEIVLNISAKDQGLQPKISYTKLIVNITDVNDQVP
TFTQSSYHVSLVEHAPAGTELVVLSASDDDLGANGTIRFSFDAETPAGVQALFRLDAVSG
RLSTAAELDREDQASYLLHIQAADAGSPPLHSVGKVNITLKDINDNRPVFYPVQYFANVK
ENEPSGSYVTTVSATDPDLGRNGTVKYIITAGDASKFRINSNTGKITTLVPLDREEKTAY
QLQVTGADGNGLRSHTQAIVTVTVIDTQDNPPVFGQRVYSFVMFENVGIGTVIGTVSATT
VDLNTNISYLITSGDQRGLFAVNSAGQITASSQIDREEQGFYQLKVVARAGEITGEAFVN
ITVKDLNDNAPHFIHAVEHVSAVENWSTGHVIFQAKASDPDEGTNGMVVYSLKQNPKGLF
HVHEKHGLITLTGPLEVTTSSYEVEVIASDMGVPQHTSSLILIISVYDVNDNSPVFDQLS
YEVIILESEPVNSRFFKVQATDKDSGLNGEIMYDIDGGNTGDVFGIFPDGQLYIKSELDR
EIQDTYNLVVVAKDRAVEPLSATVNVSVILDDVNDNRPLFNSTNYVFHFEEEQKRGALVG
RVFSEDKDFGPNSEVRYTFETPQPNFELNVITGELTSTLQLDRELLVRQRGAAVFNFLVV
SSDQGLPKPLRDQAKVQVYIQDINDNPPKFTKDIYQASIAESAQNMTQLLRVSASDVDEN
KNGLVRYRITEGNEEGQFSIDSSSGQVTLVGKLDYESTSSYSLKIIAVDAGAVPLSSSCM
LSISILDENDNSPSFPKSSLSVDVLENMRIGELVASVTATDADSGQNADITYSITATNNH
GTFSISPNTGSIFLVKRLDFETQSFYKLNISAKDNGRPPRSSSIPVVIHVRDFNDNPPIF
TPGDIFKSIPENLPISASVMTITAHDTDADINGQLEYSIVQQIPRGSHFSVNPSTGLIYT
NKEIDREFSNLFELTIKATDQAVPVEFRRFALKNVTIWVTDQNDNVPTFLSQNALVAEPN
IVIGSILTTVVAFDPDEGANGEVEYELVEGDSDTFIMDRYSGDIRLASQLVPSRLMYTLT
VSATDHGTDRKTSRTELTIILQGMDGPVFSQPKYITILKEGQPPGTNVISLDASSPRGSA
TKVEYFIVAVRSGGKAVGRLFTIGRNTGVIQTAAELDREQGSDLYLVDVYAIETDASQPR
TQRAERLALADLGVCMDAPVSQLSSPLLTSKRCRVELCRLMRLKKEKTVLGRVLDMSDGV
IGSCGNEGRGVVKGNILGGFWKY
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atgctatggaccctgtcgcggtactcggcatccagtcaggtccgtcaagagtttcaggtc
ctggaggagcagcccgtcggcacctacgtgggcacgatagagaccaagcccagcttcacg
taccgctttagcgagaaccacaaactttttgccatcaacggcaccacgggggacatttac
acctcctcggtgattgacagggaggttttgcaaagtgatgtcatcaacgtcgtggtgctg
tccagccagcccacctaccccacagaggtcaggatagtcgtcctggatattaacgataac
tccccggtgtttcccgacgcgtcgatcgtcgtgtccttcaaggaggacgccagcagcggc
aggcaggtcatactggacactgccacggactcggacattggaagtaacggagtagaccac
accacgtacagaatagtgaaggggaacgagcagaggaaattccgcttggatataacagtc
aatcctagtggagagggggcattcttgcaccttgtttcgaccggaggcttggacagggaa
gtcactcccttctatcagctcctggttgaagtggaggacaaaggagacccaaaaaagttt
ggctacctgcaagtgaacgtgactatccaagacattaacgacaacccccctatatttgag
caagaccaatatcaagccagtgttttcgaggatgcagcggtaggttctagtgttctgcag
attacggcatcagatcaggacgagggagccaatgctgaaatcaggtaccttttagatgaa
gggacgcctttccaaattgacccgaaagcgggaactattattataaaagagggtttggac
tacgagagtaagaaggagtattctctgactattcatgcagtagataatggggtgccctct
ctgtctggcagaacagaggccacgataaaactcctagatgtaaatgataatgacccggta
gtgaagtttaggtattttcccaccacctctaaatttgcctctgttgatgaaaatgcgcag
atcggcacggttgtggctttactcactgtgtcagattcggactcccccacggccaacggc
aacatatccgtttcaatcttaggaggcaacgagcagaggcactttgaagtgcacacgtct
cccgtgcccaatttaagcctgatcaaagtagccagtgtgttagacagagagagaatttcc
tcatacaacctgaccgtgtctgtgtcagacaatggcaagcctgtggcccggtcctccttc
gccagtctggttatttttgtgaatgatatcaatgatcacccgcccatatttgaggaaaca
ctgtacagagtagatatcagcgaagacataccaaaaggcagctacattaaaggggtttct
gcaacagatggcgactccggacagaatgccaacctgcgctactccctggtgtctggaaac
actttgggctggttctccatcagtgaaaacagcggtctggttaccagcgccgctttgcta
gatagggaaatagcatctgaaattgtgctcaacattagtgccaaggaccaggggctgcag
cccaagatttcttacaccaaactgatagtcaacatcactgatgtgaatgaccaagtgccc
acttttacacagagctcatatcacgtttctctggtggagcacgctcctgccggcactgag
ctggtggtgctgtctgcctcagatgacgacctcggggccaatggaactatccggttctca
tttgatgcagagactccagccggcgtccaggcgctgtttcgcctggatgccgtgtcaggg
cgattaagcacagccgcggagctagacagggaggatcaggcctcctacttactccatatc
caggcagcagacgcaggcagcccccctttgcactctgtaggaaaagtcaacatcaccctg
aaggatatcaatgacaataggccggttttttatccggtgcagtattttgccaatgtgaaa
gagaacgagccctcgggttcttatgtaaccaccgtttcagccacagaccctgatttgggt
cgaaatggcacagtcaaatatataattacagctggagatgcttccaaattccgcattaat
agcaacacagggaaaattaccacgcttgtgcccctggatagagaggagaaaactgcatac
cagctgcaggtgactggagcagatggcaacggcctgcgctcacacacccaagccattgtg
actgtaactgtcatagacacacaggataacccaccggtcttcggccagagagtctacagc
tttgtcatgtttgaaaatgttggcatcgggacagttatagggacagtgtcagccaccact
gtagacctgaacacaaacatttcatatttaatcacctcaggggaccagagggggcttttt
gctgtaaacagcgcaggtcagatcacagcatcgagccagatagacagagaggagcagggg
ttttatcagctgaaagtcgtggccagagctggggagatcacaggagaagcctttgttaac
atcactgtgaaggacttaaatgacaatgctcctcattttattcacgccgtggagcatgtg
agtgcagtggaaaactggagcacaggtcatgtcatattccaggccaaagcttcagaccct
gatgaaggcacaaatggcatggtggtctacagcctcaaacaaaaccccaaaggtctgttt
catgttcacgagaagcatggcctcatcacactgactgggccgctggaggtcaccacaagc
tcttatgaggtcgaggtcatcgcatcggacatgggggtcccccagcacacctccagcctc
atcctcatcatcagtgtttatgacgtgaatgacaactcaccggtgtttgaccagctctca
tatgaggtcatcatcttggagtctgagcctgtcaacagccgctttttcaaagtgcaggcc
actgacaaagactccggtcttaacggggagattatgtacgatatcgatggtggcaacaca
ggtgatgtgtttggtatttttccagacgggcagctgtacatcaaatcggagctggacaga
gagatacaggacacatacaacttagtggttgtggccaaagacagagctgttgaaccatta
agtgccaccgtcaatgtcagtgtgattctagacgatgtaaatgataaccgtcctcttttt
aacagtaccaattatgtgtttcattttgaggaagagcagaagaggggggcgctggtcggg
cgtgttttttctgaggataaggactttggcccaaacagtgaggtcagatatacatttgag
actccgcagcccaactttgagctgaatgtcatcacgggggagttgaccagcactctgcag
ttagaccgtgagctgctcgtgagacaaagaggcgccgccgtgttcaacttcctggtcgtc
tcgtcagaccagggtctccccaagcctctcagagaccaggccaaagtgcaagtttacatt
caagacatcaacgacaacccgcctaaattcaccaaagacatttaccaggcctccatcgca
gagtcagctcaaaacatgacacaattgctgagagtctccgcctctgatgtggatgagaac
aaaaatggactggtacgttatcgcatcactgagggcaacgaggagggacagttctctatt
gatagcagctctggacaggttacgttagttggaaagctggactatgaatctacatcctcc
tattctttgaaaataatagctgttgatgctggggctgtgcccttgtcctcctcttgcatg
cttagtattagcatcctggatgagaatgacaactccccctccttccctaaatcctcactg
tctgtggacgtcttggagaacatgaggataggagagttggtggcctccgtgaccgccacc
gacgcagattcaggtcaaaacgcagatataacgtacagcatcacagccacaaacaaccac
ggcactttcagcatcagccccaacactggtagcatctttttggttaaaaggctggacttt
gaaactcagtcattttacaaactaaacatcagtgcaaaggacaatggcagaccaccccgc
tcctcatccattcctgtggtcattcatgtcagggattttaacgataatcctcccatattc
acgcctggtgacattttcaaatccatccctgaaaatcttcctatctcagcctcagtcatg
acgattacagctcatgacacagatgcagacataaacgggcagctggagtattccattgtt
cagcagattcctcggggaagccacttcagcgtcaacccgagcactgggctcatatatacc
aacaaggaaatcgacagggaattctccaatctgttcgagctgacaatcaaagcgacagac
caggcagttccagtggaattccgccgctttgccctgaaaaatgtcacaatatgggtcacg
gaccagaatgataatgttcccacttttctgtcacagaatgctcttgtggctgagcccaac
atagtcatcggctccatcctgacaacagtagtggcttttgaccccgatgagggggcaaat
ggggaagtggagtatgagcttgtagagggggactcagacaccttcatcatggaccggtac
agcggggatattcgcctggcctcccagctggtaccgtcccgactcatgtacaccctcaca
gtatcagccactgaccacggcactgaccgcaagacctccagaactgagctgactatcatc
ctacaagggatggatgggcctgttttttcccagcccaaatatatcaccatcctcaaagaa
ggccagccaccaggcacgaatgtcatctccctggatgcctcgagcccccggggctctgcg
accaaagtggagtacttcatcgtggcggtgcgcagcggtggaaaagccgtggggcggctt
ttcaccatcggccgcaacactggagtgatacagacggcagctgagttggaccgagagcaa
ggctccgacctctacctggtggatgtgtacgccattgagacggacgccagccagcccaga
acgcagcgtgctgagcgtcttgccttggcagatttaggagtgtgtatggatgcccctgtc
agccagctttcctcccctctcctcaccagtaagagatgtagggtagagctgtgtcgactc
atgagattgaagaaagaaaagactgttttggggagggttctggacatgtcagacggtgtt
attgggagttgtgggaatgaaggaagaggagtggtgaagggaaacattttaggggggttc
tggaagtactag
DBGET
integrated database retrieval system
