Xiphias gladius (swordfish): 120785764
Help
Entry
120785764 CDS
T07311
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
120785764 (pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xgl01009
]
120785764 (pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120785764 (pcdh20)
Protein phosphatases and associated proteins [BR:
xgl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120785764 (pcdh20)
Cell adhesion molecules [BR:
xgl04515
]
Cadherins
Protocadherins
120785764 (pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
120785764
NCBI-ProteinID:
XP_039976599
LinkDB
All DBs
Position
LG23:complement(18584747..18587933)
Genome browser
AA seq
859 aa
AA seq
DB search
MGHGTPDNMNRAGLLQNLLLLVHLRQIICGSVCFFVPEEQEPGTLAGSLSKHFPPPYQLL
TQEYLWMDKNTGNFYTTEQKMDREALCPKETKAEECIILHNAIVRPSGDLIQFPVIIEDI
NDNAPHFENSEIHLRVSEDVTVGTSFLLDDQAQDRDAGLNGELQYHLEDSEGVFGLKVEE
DVPFIILVVQTALDRETQDQYQMALVATDCGADPLSATATLIVTVTDVNDNCPSFSSDSP
SSITIPGDSPRNMLVAQVRATDPDSGPNAAIVYSLSPKVSERAKKLFSLDSLTGYIRLTQ
DLQSDNSEELVLKVLASGHHCPPADMQVTISVLPKANQELTIKIGFIAEHQNQTMLLPEN
QPPTVLAVLELEGDSSFKGSCLAIEGKVPFTLSPQNGKYLLSTSKPLDYELKREHHISVV
VHERSGEVSVIVPSRHVIRVLVADVNDNAPHFLQSHYQLEVGENNQPGMSLLQVSASDAD
SGYNGRVTYRLDKHTPTIFNIDPVTGQLSVLAALDREQQGVHKLTVLAQDSGSPPLESLT
TVSIRVLDQNDNAPVFLTPHFIFFIPENVPPFAQVGRVGVTDPDEGENGNTELHVVSSSG
PFVVDNTQGTLRTNSNLDRETEDHYELYLLATDHGHPIALTSTARVTVFVEDINDNQPKV
ILPSSNSSCLTVSLYAMAGTMVTKIYAIDEDSGLNSEITYTVVPPEPAQNSCPFRVDSRS
GNITLAKQLLQKDLGMHHLFIVVRDGGKPFPLYSTIWVNLLVNERMEPCHLERAPTWTGT
PNLVQTPSRAPMCEIKIPRSAQLTFLAGLGLMLASTCLIGVTVVLYLKWRRSCLRQSKRG
HTEENKISFRLQDKYYSDD
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgggccatgggactcctgataatatgaacagggctggactactgcagaatctgctgctt
ttggtccatctcaggcagatcatatgtggttctgtctgcttttttgtcccagaggaacag
gaacctggtactctggctggatcacttagtaaacactttccacctccgtaccagctcctg
acccaggagtacctgtggatggacaaaaacacagggaatttctacaccactgagcaaaag
atggatcgtgaggccctctgtcccaaggagacaaaagctgaggaatgcattattctacac
aatgctatcgtgaggccctcgggagaccttatacagtttcctgtgatcatagaggacatc
aacgacaacgcccctcattttgaaaacagtgaaatacacctaagggtgtctgaggacgtg
actgtagggaccagtttcttattggatgaccaggctcaggacagggacgccggtcttaac
ggagagctgcagtaccacctagaagattccgagggagttttcggtttaaaagtagaagaa
gacgtgcctttcatcattctggttgtgcaaacagccctggatagagagactcaggaccaa
tatcagatggcgctggtggccaccgactgcggcgcagaccctttaagtgctacagcaact
ttaatagtcacagtgacagatgttaatgacaactgtccaagctttagctctgacagccca
agcagtatcaccatccctggagactccccgaggaacatgttggttgctcaggtcagagca
acagacccagattcaggcccgaatgctgccatcgtttattccctcagtcccaaagtctct
gagcgggccaagaagctctttagtcttgacagcctcaccggatacatcagactaacacag
gacctccagagtgacaactctgaggagctggtgttgaaagtgttagctagcggccatcac
tgccccccagcagacatgcaggtaaccatatccgtgctccccaaggcgaaccaagagctg
acaatcaagatcgggttcatagcagagcatcaaaaccagactatgttgttaccagagaac
cagccccccaccgtcttagccgttttagagcttgagggtgacagcagctttaaaggctca
tgtcttgccattgagggcaaagtgcctttcactttgagcccacagaatggcaaatatctg
ctttccacatcaaagcccctagactatgagctgaaaagggaacaccatatttctgtggta
gtgcatgagagatcaggtgaagtgtctgtgatcgttccttctaggcatgtgatcagggtg
ttggtggcagatgtcaatgataatgctccacatttcctccagtctcactaccagctggag
gtgggggaaaacaaccagccagggatgtcactgctgcaggtctcagcttcagatgcagac
agcggatacaacggcagggtgacctacaggctggacaaacacacacctaccatctttaac
attgaccctgtgacgggtcaactgtctgtgttagccgctctggatagggaacagcagggt
gtacacaaactcactgtgcttgcacaagatagcggctctcctcccttggagtccctgacc
acagtgtccattcgtgttctggaccagaatgacaatgcgcctgtttttctaacccctcac
ttcatctttttcatccctgagaatgtaccaccatttgcccaggtggggagagtaggggtg
acagacccagatgaaggggagaatgggaacacagagttgcatgttgtaagcagcagtgga
ccatttgttgtggataacacacaggggacacttcgcaccaacagcaacttggaccgtgag
actgaggaccactatgaactctacctgctggccactgatcacgggcacccgatcgctttg
acgtccactgccagggtaactgtctttgtggaggacatcaatgacaaccagccaaaagtg
atccttcctagcagcaactcctcatgcctgactgtctctctttatgcaatggcagggacc
atggtaacaaagatctatgccatcgatgaggactcagggctgaattcagagattacatac
actgttgtgccaccagaaccagcgcaaaacagctgtcccttccgggtggattcaaggtca
gggaacatcaccttagctaagcaacttctacagaaggacctgggtatgcatcacctgttc
attgtggtcagagatggggggaaaccatttccactttacagcactatctgggttaatctg
ttggtcaatgagcgcatggagccctgccacttggaaagggcacccacctggacagggaca
cctaacttggttcaaaccccttcaagggcccccatgtgtgagataaagatccctagatct
gctcagctgacatttttagccggcctgggtttaatgctggcatccacatgtttgattggg
gtgacagttgttttatacctgaaatggaggagaagttgtctacgacaaagcaagcggggg
cacactgaggagaataagatttcattcaggctccaagacaaatattactctgatgactaa
DBGET
integrated database retrieval system
