Xiphias gladius (swordfish): 120785810
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Entry
120785810 CDS
T07311
Name
(RefSeq) zinc finger protein ubi-d4-like isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120785810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xgl03041
]
120785810
03036 Chromosome and associated proteins [BR:
xgl03036
]
120785810
Spliceosome [BR:
xgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120785810
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120785810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
zf_RING_Vps8
Lar_restr_allev
zf-C2H2
PHD_2
zf-C2H2_4
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
120785810
NCBI-ProteinID:
XP_039976700
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Position
LG23:13520420..13530615
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AA seq
407 aa
AA seq
DB search
MAAAVDSVVKVLGEQYYRDAMEQCHSYNARLCAERSILMPFLDSQTGVAQSNCYIWMEKR
HRSAGVAPGQLYTYPARRWRKKRRSHPPEDPRLAFPPLKAADLELGLKRDALGAVDGSSL
EALLKGEPLDRRSGVSDLRGTEDDPATVEPPATSTVTQTSSGRVRKRVLDHDDYLDDLDD
DDFEDETPKRRGKSKSKGRSDKNGKKKTEAAAAALEERDKPYACDICGKRYKNRPGLSYH
YTHSHLAEEEGEDREEIEAPPTPRQPEEQKTTKKGPNGLALPNDYCDFCLGDSTLNQKTG
QSEELVSCSDCGRSGHPTCLQFTPVMMAAVKTYRWQCIECKCCNVCGTSENDDQLLFCDD
CDRGYHMYCLTPPMTEPPEGSWSCHLCLALLKDKASIYQQNQSSAPE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgtcgacagtgttgtgaaagtgctgggagagcagtattacagagatgcc
atggagcagtgtcatagttacaacgctcgtctgtgtgctgagcgcagcatcctcatgcct
ttcctggactctcagactggcgtagcccagtccaactgttacatctggatggagaagaga
caccggagtgcgggtgtagctccagggcagctgtacacgtacccagcccgtcgctggagg
aagaaacggcgttctcatccccctgaggacccccggttagctttccctcctctcaaagca
gcagatttggagctgggactgaagcgtgatgcgttgggggcggtggatggcagcagtctg
gaggccctgctgaaaggggaacccctcgacaggaggagtggcgtgtcggacctccgcggc
accgaggatgacccagccacggtggagcctcctgccacgtcgacggtcacgcaaacatcg
tctgggcgtgtccgcaagagagtcctggaccacgacgactacttggatgacctggacgat
gatgactttgaggacgagactcccaagagacgaggcaagagcaagtccaagggtcgcagc
gacaagaacggcaagaagaaaacggaggctgcagctgcagcgctggaggagagggacaaa
ccttacgcctgcgacatctgtgggaagcgctacaagaaccgtcctggcctgagctaccac
tatacacactctcacctggccgaggaggagggcgaggaccgcgaggagatcgaggcacca
cccactcctcgccagcctgaggagcagaagactactaagaagggtccaaacgggctggcg
ctgcccaacgattactgtgacttctgtctgggagactccaccttgaaccagaagactggc
caatcagaagagctggtatcctgctcagactgtgggcgctcaggccacccgacatgcctg
cagttcacacctgtgatgatggcggcagtgaagacctaccgctggcagtgcattgagtgc
aagtgctgcaacgtttgcggcacctcagagaatgacgaccagctgctgttctgtgatgac
tgtgaccgaggctaccacatgtactgtttaactccccccatgactgaaccccccgagggg
agctggagctgccacctgtgcctggctctgctgaaggacaaagcctccatataccagcag
aaccagagctccgcccccgagtga
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