Entry |
|
Symbol |
si:dkey-206d17.12
|
Name |
(RefSeq) ribonuclease ZC3H12A
|
KO |
K18668 | ribonuclease ZC3H12 [EC:3.1.-.-] |
|
Organism |
xgl Xiphias gladius (swordfish)
|
Brite |
KEGG Orthology (KO) [BR:xgl00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:xgl03019]
120785890 (si:dkey-206d17.12)
Messenger RNA biogenesis [BR:xgl03019]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
120785890 (si:dkey-206d17.12)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
LG24:19825160..19836815
|
AA seq |
667 aa
MVCTEEEEMNADVAVFPSVHPWSKIPATTCLNLTYSDTPAWIFPSRLPVQNSSRASSEKM
YPREPDPSLDPQDPEAQMDFFHKLGYSTAQVRAVQQKFGPNMDTDKVLGELVRIGASREA
KQGPVTTMSVLVSRGNIQAMGPTLQLPVTVSSAQSREESCEDEDALRRVVIDGSNVAMSH
GNKEVFSCLGIQLAVNFFMDRGHTEVTVFVPSWRKEQPRPDVPITDQHILLDLERRKILV
FTPSRRVAGKRVVCNDDCFIVKLAYESDGIIVSNDMYRDLQGEKPEWKRFIEERLLMYSF
VNNKFMPPDDPLGRHGPTLENFLRRFPKIQKKQPCPYGKKCTYGIKCKFHHPERAKQSSR
SVADELRENAKHPSTAQKQPSSCSSPVPGESLSLVEDMAKKLTLGHENGSVKTDHKNELV
AQVKTGHRSSKRATSRKDKTIQHSSPDHGSVQHCGSQEQLDSGLGSIENQPMEAPWSLCD
HQYGTTYQSCQHTRGVRQQYCPPKSAPCSCCSHGPPSQGTAPAFQHPNHHHSIGPVSSHS
SDMIPYGPPHYPSYGAYPVGSPSFSPLTDFQHSRVHSRQQQRYWSDAFRGHPPAVGSLPG
ERSQWEPPQGTLPSHSRKERELVRKKLLAIFSAHLVDTAMDMFPQMMDPQMLVAEILMLQ
NQNRLLR |
NT seq |
2004 nt +upstreamnt +downstreamnt
atggtctgcaccgaggaagaggagatgaatgctgatgttgctgtttttccatccgtgcac
ccgtggagtaaaatcccagccacgacctgtctgaacctcacgtactctgacacccctgca
tggatcttcccttcacgtctccctgttcaaaactcctcccgtgcttccagtgagaaaatg
tatccccgtgaacctgacccatccctggacccccaggacccggaggcccagatggacttc
ttccacaagctggggtactccacggctcaggttcgggccgttcagcagaagttcggcccc
aacatggacaccgataaggttctgggggagctggtgaggatcggtgccagtcgggaggcc
aagcaggggccagtgacgacgatgtcggtgctggtgtccagagggaacatccaggccatg
ggccccaccctgcagctgcctgttactgtatcgtctgctcagagcagagaggagagctgt
gaggatgaagacgccctgagacgagttgttatagatggcagcaacgtggccatgagccat
gggaacaaagaagttttctcctgtctgggaatccagttggctgtgaacttcttcatggac
agaggccacactgaagtcactgtctttgttccttcgtggaggaaggagcagccccggcca
gatgttcccatcacagatcagcacattctgctagacctggagaggaggaagatcctggtg
ttcacaccatctcgacgcgttgcaggcaaacgggtggtgtgtaatgacgactgcttcatt
gtcaaactggcctacgagtctgacggcatcatcgtgtccaacgacatgtaccgggacctt
cagggagagaagccggagtggaagcgcttcatcgaggagaggctactcatgtactccttc
gttaacaacaagtttatgcctcctgatgatcctctgggccgccatggaccgaccctggag
aacttcctgcggaggtttccaaagattcagaaaaaacagccatgcccttatggaaagaaa
tgtacttatggaatcaaatgtaaattccaccatcccgagcgagccaagcagtccagtcgc
tcagttgccgacgagcttcgggagaacgctaagcatccctcaaccgctcagaagcaacct
tcgtcctgctccagtcccgtgcctggagagagcctctcgctggtggaggacatggcgaag
aaactgaccctgggacatgagaatggctctgtaaagacagatcataaaaatgaacttgta
gctcaggtgaagacgggccaccgctccagtaaaagggccacatctaggaaggacaagacc
atccaacactcgtcccctgaccacggctcagtgcagcactgtggctcccaggagcagctg
gactctggtttaggctccatagagaaccagccaatggaggctccttggagtctgtgtgat
caccagtatgggacgacataccagagctgccagcatacccgcggtgtaagacaacagtac
tgtcctccaaaaagtgcaccgtgcagctgctgttcacatggccctccctctcaggggacc
gcaccagctttccagcaccccaaccaccatcacagcatcgggccagtcagcagccacagc
tctgatatgatcccctatggtccgcctcattaccccagctacggtgcatacccggtcggc
tctccttcgttcagtccgctgacagatttccagcacagcagagtccacagccgtcagcag
cagaggtactggtccgacgcgttccgaggtcatcctccagcggtcggcagcctaccgggg
gagcgctcacagtgggagcctccacaggggacgctaccgagtcacagcaggaaggagaga
gagcttgtccggaagaagctcctcgccatcttcagtgcccacttggtggacacggccatg
gacatgtttcctcagatgatggatccgcagatgcttgttgctgagatcctcatgctgcag
aatcagaaccggttgctgagatga |