Xiphias gladius (swordfish): 120786193
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Entry
120786193 CDS
T07311
Name
(RefSeq) collagen alpha-1(XIV) chain-like isoform X1
KO
K08133
collagen type XIV alpha
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xgl00535
]
120786193
Proteoglycans [BR:
xgl00535
]
Extracellular matrix (ECM) proteoglycans
Others
120786193
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
FN3_DSCAM-DSCAML_C
Fn3_VIN3
Pur_ac_phosph_N
Fn3_ROS1
Fn3_PBP1
VWA_3
Fn3-I_PB4
Motif
Other DBs
NCBI-GeneID:
120786193
NCBI-ProteinID:
XP_039977373
LinkDB
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Position
LG24
Genome browser
AA seq
1869 aa
AA seq
DB search
MQFSVRLSLGLLGLVLISLFPQPARGQVSSPRRFRTKVLSPTKLEVLWKEPKGEFESYKV
IYATRPGGQQTEVQVSKQEAKLLIEDFDPSKEYNFNIIAVNGGRESKPLQAKYEAQRTGI
ETVQSQRRQDSGVTEEKNEISEAEEGFMCKTPAIADIVILVDGSWSIGRINFRLVRTFLE
NLVRAFSVEFDKTRIGLAQYSGDPRIEWHLNAHTTKEAVIDAVKNLPYKGGNTLTGLALT
FILENSFKPESGSRPGVPKIGILITDGKSQDDVSPPAQSLREAGIELFAIGVKNADENEL
KAIASPPEETHVYNVADFSVMSDIVEGLTKTICDRVEQLDKQLKGGEPAPPPTSVAPPRD
LVTSEVTARSFRATWTHAPGQVEKYRVIYYPASGGKPEEKVVQGTENSVELNYLNSLTEY
QVAVFAVYRSSASEALRGSATTLALPMVNGLELFDITHSTMRVRWKTAAGASGYMILYAP
LTEGDPSDEKEVKVADSVNEVELEGLTPDTEYTVTVYAMYGEEASDPMTSQQTTLPLTPA
KYLRFSDVDHSSARLAWDSASGRVKGYRVMYVKTNGVQTNEVDVGPVTTWLLRNLTSLTE
YTVGVFAIYDEGQAEAVTDSFTTKTVPDPLDLRSSEISTDSFRVSWRRPASDVVLYRLTW
TPADGGDSAEALVNGNTNSYLIRGLSPSTEYEVLLAAIYDNEVESDEVILVESTDERTTT
VALTTTTTAAPRYGVRNMRIDEETAFSMRVSWQPVDYRNVRHYRLSYISARGDRAEETRT
VPTAQSSLVLQPLLSDTEYKVAITPVYPDGNGPTAARMGRTLPLSAPKNLRVSEEWYNRF
RISWDAPPSPTMGYRVVYQPVSAPEQALETFVGEDVNTILIVHLLSGTEYSVKVIASYTT
GSSEALSGRAKTLFLGVTNLSVYQVRMTSLCAQWQTHRHAVAYIVEIESLLNGQKQEAKL
SGGAGRHCFSNLEPSTQYKISVYTQLHDGTNGPAVTTVEETLPIPTPAPTRPPTTTPPPT
IPPAKEVCKAARADLVFLVDGSWSIGDENFLKIIRFLYSTTGALDRIGPDGTQVAMAQFS
DDARTEFKLNSYSDKEQLLDAINRISYKGGNTKTGRAIQHVKENIFTVEGGVRRGVPNVL
VVLTDGRSQDDVNKVSKEMQMEGYIVFAIGFADADYGELVSIASKPSDRHVFFVDDLDAF
KKIEEKLVTFVCEAATATCPSIPMSGSTTPGFRMMELFGLVENRYSSVSGVSMVPGTFNT
FPCFHLHSDALLAQPTRYIHPEGLPSDYTITLLLRLLPNTPEEPFALWEILNKNNEPLVG
VILDNGGKTLTFFNNDYKGEFQTVTFEGPEIQKLFYGSFHKLHIAIGKTSAKVVIDCKMV
AEKTINAAGNITTDGVEVLGRMVRSRGNKDNSAPFQLQIFDIVCSTSWANRDKCCELPGL
RKEADCPALPKACTCTQDSKGPPGPAGSPGGPGIRGARGDRGEPGPVGPTGPVGDTGVPG
PQGPQGPQGPSGRSIIGSPGAPGERGQKGDAGQQGAQGIPGRAGSPGREGPPGPRGLPGK
DGSPGRQGPSGTIGTPGAPGAPGSTGPPGKQGELGPPGPSGSKGEKGERGDLQSTASVQA
IARQVCEQLIQSHMARYNSILNHVPSPPVSIRTVPGPPGEPGRQGAPGPQGEQGPPGRPG
FPGQNGQNGQPGERGQPGEKGEKGSPGTGVQGPRGLPGPPGVQGQGRPGSQGSSGRPGNP
GTPGRSGVPGPVGPAGPPGYCDPNSCVGYNVGGGEDVTDGGAIPAVQLPSNVFQNYGEAE
EDDPYRYYQPNYPAPRPVSPYDPALAADNIELRSPGVHRSSRSLEGRKEVAGPERRLKRG
VKTPPSLTN
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcagtcagactgagtctcggcctgctgggcttggttctcatctccctgttc
ccccagccagcgcggggccaagtttcatcgccgcgacgatttcgcaccaaagtcctgagc
cccaccaagctggaggtgttgtggaaagagccgaaaggagagtttgaaagctacaaagtc
atttacgccacgcgaccaggtggacagcagacggaggtccaggtgtcgaagcaggaagca
aagctcctcattgaggactttgacccctctaaagaatacaactttaacatcattgcagtc
aatggaggacgggagagcaaacctcttcaggccaaatacgaagctcagcggacaggcatc
gagacggttcagtcccagaggagacaagacagcggcgtcaccgaggagaaaaacgagatc
tctgaagctgaggaggggttcatgtgtaagactccagccatagctgacattgtgattctg
gtggacggctcctggagcattggtcgcatcaacttcaggctggtcaggaccttcctggaa
aacctggtcagggccttcagcgtggagtttgacaagaccaggatcggcctggctcagtac
agcggagaccccaggattgagtggcatcttaacgctcacaccaccaaagaggctgtgatt
gatgccgtgaagaacctgccgtataaaggaggaaacacactgacaggtttggctctgacc
ttcatcctggagaacagcttcaaaccggagtccggatccagacccggcgttcccaagata
ggaatcctcatcaccgatgggaagtcccaggacgatgtgtccccccccgcacagagcctg
agggaagcggggatagagctgttcgccatcggggtgaaaaacgccgatgagaatgagctg
aaggccatcgcctctcctcccgaggaaactcacgtctacaacgtggcggacttcagcgtg
atgagcgacatcgtggaaggtctcaccaagaccatctgcgaccgagtggagcagctcgac
aagcagctcaaaggtggagaacccgcccccccgcccacttccgtagctcctccccgtgac
ctagtgacctctgaggtcaccgctcgcagctttcgggcgacgtggacccatgcgccgggc
caggtggagaagtaccgggtgatctactaccccgccagcggaggaaagccggaggaaaaa
gtggtccagggcacagagaacagcgtggagctgaactacctgaactctctgacggagtac
caggtggccgtgttcgccgtctaccgcagctccgccagtgaggccctgagaggaagtgct
accacgttggccctgcccatggtgaacggcctggagctgtttgatatcacccacagcacc
atgagggtccgctggaagaccgctgccggggcttctgggtacatgatcctctacgccccg
ctgaccgagggagacccttcagatgagaaggaggtgaaggtggcagactcggtgaatgag
gtggagcttgagggactgaccccggacaccgagtacacggtgacagtttacgccatgtac
ggagaggaggccagcgaccccatgaccagccagcagaccacactgccgctgaccccggcc
aagtacctgcgtttctccgacgtggaccacagctccgcccggctcgcatgggactccgcc
tccgggagggtcaaaggataccgcgtcatgtacgtcaagaccaacggggtccagactaat
gaggtggatgttggccccgtgaccacctggttgctaagaaacctgacctccctgacggag
tacacggttggtgtcttcgccatctacgacgagggacaggctgaggctgtgactgacagc
ttcactacgaagactgtcccggacccgctggatctgaggagcagtgagatctctactgac
agcttcagggtgtcatggcgacgcccggcctctgatgtggtgctgtaccgcctcacctgg
acgcccgccgacggaggagacagtgcggaggctctggtgaacggaaataccaacagctac
ctgataagaggactcagcccctccaccgagtacgaagtcctcctggctgccatctatgac
aatgaggtcgagagtgacgaggtgatcctcgtggagtccactgatgaaagaacaaccacc
gtcgctctgacaaccaccaccacagcagctcctcgttacggcgtgaggaacatgaggatc
gacgaggaaaccgccttcagtatgcgggtgtcctggcagcccgtcgactacaggaacgtc
cgacattatcggctgagctacatcagtgccaggggagaccgagcagaggagacgaggacg
gtgcccacggcacagagcagcctggttctgcagcctctgctgtcagacacggagtacaaa
gtcgccatcactcctgtttaccccgatggaaacggaccgacagcggcacgaatgggacga
acacttcctctctcagctcctaagaacctgcgagtatcagaggagtggtacaaccgcttc
aggatcagctgggacgctccaccctcacccaccatgggctacagagtcgtctaccagcct
gtatctgcccctgagcaagctttggagaccttcgtgggggaggacgtgaacaccatactg
atcgtgcacctgctgagcgggacagagtacagtgtcaaggtcattgcctcctacaccacc
ggatccagcgaagccttgtctgggagggccaagaccctgttcctgggggtgactaacctg
agtgtgtaccaggtgaggatgaccagtttgtgcgcccagtggcagactcaccggcacgca
gtcgcctacatagtggaaatcgagtccctgctcaacggtcagaagcaggaggcgaagctg
agcggaggagccggcagacactgtttcagcaacctggagcccagcacgcagtacaagatc
agcgtgtacacccagctgcacgacgggactaacggaccggcagtcactaccgtcgaagag
acgctacccatcccgaccccggcgcccaccaggccccccaccaccaccccgccacccacc
atccccccggccaaagaagtctgtaaggcagccagagcagacctagttttcctggttgat
gggtcctggagtatcggtgacgaaaacttcctgaagatcatccgcttcctgtacagcacc
accggcgctctggacaggatcggcccggatggcacacaggtggccatggcccagttcagt
gacgacgcccggaccgagttcaagctgaactcgtacagcgacaaggagcaactgctggac
gccatcaaccggatctcctacaagggaggaaacaccaagacgggtcgagccatccagcat
gtgaaggaaaacatcttcacggtggagggaggagtcaggaggggagtccccaatgtcctc
gtggtcctcaccgacggccgatcccaggacgacgtcaacaaggtttccaaggagatgcag
atggaaggttacatcgtgttcgctatcggctttgctgacgctgactacggggagctggtg
agcatcgccagtaagcccagcgacaggcacgtcttcttcgtggacgacctggacgccttc
aagaagatcgaagagaagctggtgacctttgtgtgtgaagccgccactgccacttgtcca
tctataccaatgagcggcagcacaacaccaggtttccgcatgatggagctgtttgggctg
gtggagaatcggtacagcagcgtctctggcgtttccatggtacccggcaccttcaacacc
ttcccttgtttccacttgcacagtgacgcactgctggcgcagccaaccaggtacatccac
ccagaggggcttccgtccgactacaccatcaccctgctgttgagactgctgcccaacaca
ccagaggagccctttgccctctgggagatcctcaacaagaacaacgagccactggtggga
gtcatcctggacaatggaggaaagactctgacgttcttcaacaacgactacaaaggggag
tttcagaccgtgacctttgaagggccggaaatccaaaaactcttctacggcagcttccac
aagcttcacattgcgatcggcaagacgagcgccaaagtggtgattgactgcaagatggtg
gccgagaaaacgatcaacgcagcgggaaacatcaccactgatggagtggaagttctgggc
cggatggtccgctccagggggaacaaggacaactctgcaccgttccagctccagatcttt
gacatcgtctgcagcacctcatgggccaacagagacaagtgctgtgaacttcctggtctg
aggaaggaggcagactgcccggccttgcccaaagcctgcacctgcacccaggacagcaaa
ggcccccctggccctgctggatcaccaggaggcccaggaatcagaggagccagaggcgat
cgcggagagccaggcccggtggggccaactggtccagtaggtgatacaggtgtaccagga
ccccagggaccccaaggaccacaaggacccagtggacgctccatcattggatccccaggt
gcaccaggcgagagagggcagaaaggtgacgccgggcagcagggagcgcagggaattccg
ggtagagccggatctccaggcagagaggggcctccgggaccaagaggcctgccgggcaaa
gacggctccccgggcagacagggcccctcgggaactatcgggactccaggagccccaggg
gctccaggaagcacaggccccccaggaaaacagggagagctgggacctccgggtccatct
ggaagcaagggggagaaaggtgaacggggtgacctccagtcgacagcgtcggtccaggcc
atcgccaggcaggtctgtgagcagctgatccaaagccacatggcgcgttacaactccatc
ctgaaccacgtacccagtccaccagtgtccatccgcaccgtgccgggaccccccggagag
cccggtcgacagggagccccggggccccagggagaacagggacccccaggaagacccggc
ttcccgggacagaatggacagaacgggcaacctggagaaagaggtcaaccaggggagaag
ggtgagaagggatccccggggacaggagtccaaggccccagaggacttccaggaccccct
ggtgtccaaggtcagggcagacccggcagccagggttcatcagggcgacccgggaacccc
ggaacccccggtcggtccggtgtccctggacccgttggccccgcagggcccccgggatac
tgcgacccgaactcctgtgtgggctacaacgttggagggggtgaggatgtcactgacggc
ggcgctatccccgcagtccaactgccgtccaacgtcttccagaactacggcgaggctgag
gaggacgacccctaccgctactaccagcccaactacccggccccgcggccggtgtcgccc
tacgaccctgcgcttgccgcggacaacatcgagctgaggtcccccggcgtccaccgcagc
tcgcggagcctggaggggcggaaggaggtcgccgggccggagaggagactaaagagagga
gtgaagacgccgccgagtttaactaactga
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