KEGG   Xiphias gladius (swordfish): 120786202
Entry
120786202         CDS       T07311                                 
Symbol
ubap2l
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
xgl  Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xgl04121]
    120786202 (ubap2l)
   03400 DNA repair and recombination proteins [BR:xgl03400]
    120786202 (ubap2l)
Ubiquitin system [BR:xgl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    120786202 (ubap2l)
DNA repair and recombination proteins [BR:xgl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     120786202 (ubap2l)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 CUE GIP1_N
Other DBs
NCBI-GeneID: 120786202
NCBI-ProteinID: XP_039977402
LinkDB
Position
LG24:complement(16588394..16614554)
AA seq 1214 aa
MMTSMGGNRARGNWEQTQGQTQSQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLI
DITGKDQDESMIALHDCNGDVNRAINVLLEGSPDTDSWEMVGKKKGVSGQKETSQAETGE
EGKENREKGGEKDVARRRGGAPRKGRGASRGREFRGQENGLDGSKAGVAGRGAERGRRGR
GRGRGTVGVSGRRGGRFSAQGMGQIDKGPRYDIAGGERTFNPADYAEPAQTEENYGGGST
WNNTGSMELEEGARLEYSAGEGTNYPPKFDSAPGAWRTATEEWGTEDWNEDLSETKIFTA
SSVASMPLPQENVTITKGQRIDLAVLLGKTPPSSSSETENPPMEATQPPSLSQSLVFSNS
KQGVPLSQTSSSTPYTQHSMVSMLSKGFGDVGDPKGGSTGTTGSQFLEQYKTAQALAQLA
VQQSQTGPPNTTPSSWDTSATSLGQYDMKTQPEPAVHTPFTKRQPYQAATSTSSMLDVFL
QDKGLPPSSSVSSSSSLPQQTTSSPHVAPPPASSLPKMAVVPSLGQQASPSSSDAQGSSP
LPLQQHKLKQQKKRTSITTKIPAMAVEMPGSTDISGLNLQFGALQFGSEPVLPEYESTPT
TTTPANQVQNSLYTSPNSESTPALSNSSQMDLYDQRASQTRRYPPSVSSSPQKDMQPKNG
FSSIQATQSVEAAAGSAVSVKPTSDSVTPASVSSMGTLPDNGSGPASLLTTSNQTSLSAL
GHSEDLPPSTIPPPQHNNSHPSQQNSLAPSSVRTSNSSLLHPSVDGDSSLHSSSFPSSVS
AVPSSSVPSSSSSVASAAQVSLGAPQASSVGSATVSAPSGLGPVNSLAMGLNTASMGAPA
AATTVSVSTTASTIPSSATSSSTRSSAASSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYP
PQVYGYDDLQMLQTRIPLDYYSIPFATPTTALTGREGSLTSNPYSGDLSKFGRGDASSPA
PATTLAQTQQNQTQTHHTTQQTFLNPALPPGYSYTSLPYYTGMPGLPNTFQYGPAVFPVA
PTSSKQHGVNVGVNASATPFQQASGYGSHGYSTGYEDVGQASGSGDFCKGGYGTAVAAAA
SAQNKPASSVTGPGVGVSVTSSNTGVPDISGSVYTKTQSFEKQGFHAGTPAASFSLPSAL
GSGGPINPPAAAGYAPAPFMHILAPHQQPHSQILHHHLQQDGQSGTGQRSQNASIQQKSQ
INKSAYNSYNWGAN
NT seq 3645 nt   +upstreamnt  +downstreamnt
atgatgacgtccatgggcgggaaccgagcccggggcaactgggagcagacacagggccag
acacagagccagacacagcacaagcaaaggcctcaggctaccgcagagcagatcagactc
gcgcagatgatttcagaccacaatgatgcagactttgaagagaaggtcaaacagctgatc
gatatcacaggcaaggaccaggatgagtctatgatcgcactgcacgattgcaacggggat
gtcaacagagccattaacgtgttgctggagggtagcccagacactgactcatgggaaatg
gtggggaagaagaaaggagtgtcaggccagaaggagactagccaagcagagactggagag
gaaggaaaagagaacagggagaagggaggagagaaagatgtagcacgtcgccggggtgga
gctccacgcaagggtcgtggagccagcaggggacgagagtttcgaggacaggagaatggc
ttggatggcagcaaggctggagtagctggaagaggtgcagagcgaggccgaaggggaaga
ggcagaggaagagggactgtcggagtatctggacggcgaggaggcagattttcagcgcag
ggcatgggccagattgataaggggcccagatatgatattgcaggaggtgagagaacattc
aaccctgctgactatgcggagccagcccagacagaagaaaactatggagggggcagcacc
tggaacaacacgggaagcatggagctagaggagggagctaggttggaatactctgcagga
gagggaacaaattacccacccaagtttgactctgctcctggtgcctggaggactgccaca
gaggagtggggcactgaggactggaatgaggatctttcagagaccaagatattcacagct
tccagtgtggcgtccatgcctttgcctcaagagaatgttaccatcaccaagggacagagg
attgaccttgcggtgctcctggggaagactcccccatcctcctcctcagagacagaaaac
ccccccatggaggccacccagcctccctccttgtcccagtcactggttttcagcaattcc
aagcaaggggttccgctctcccaaacatcctccagcaccccttatacccagcacagcatg
gtcagcatgctgagcaagggtttcggggatgtgggggaccctaaaggaggtagcacaggg
accactggctctcagttcctggagcagtataaaacagcccaggcactggcccagctggca
gtccagcaatcccagacaggacctcccaacacaacaccttcatcctgggataccagtgcc
acctcacttggacaatatgatatgaagactcagccggagcctgcggtccatacacccttt
acgaagcggcaaccctatcaggccgccacctcaacctcgtccatgttggatgttttcctg
caggacaaaggcctgcctccttcctcctctgtatcctcgtcttcttccctaccccaacaa
acaacatcctcaccccatgtggcgcctccccctgcttcctcccttcccaaaatggcagtg
gtcccctctctaggtcagcaagcttctccaagttcttcagatgcccagggttcaagtcca
ctccctttgcagcaacacaaactcaaacaacagaagaagaggacctccattacaacaaag
attccagcaatggcagtggagatgcctggctcaacagacatctcaggcctcaatcttcag
tttggagcgctgcagtttgggtcagaaccagttctaccagagtatgagtccacccctacc
accacgacaccagccaaccaggttcagaacagtctgtacacaagccccaatagtgagtcg
actccagctctctcaaactccagccagatggacctgtacgatcagagagcgtctcagaca
cggcgctaccctccctcagtctcctcctccccccagaaggatatgcagcccaagaatgga
ttcagttcaatacaagcaacgcaatctgtggaagctgcagcaggctctgcagtatcagtc
aagccaacctctgattcagtcacaccggcatctgtctccagcatgggcactttgccggac
aatggctcaggccctgcctccttgttaactacatccaatcagacgtcccttagtgctctg
gggcacagtgaagaccttcctccaagcaccattccccctcctcagcacaacaactctcac
ccatcacaacagaacagccttgctccatcttcagtccggacatccaactcaagcttactg
catcccagcgtagacggtgactcaagcctgcactcctcctccttcccttcatccgtctca
gccgtgccgtcttcatcagtcccctcctcctcttcctctgtggcttctgctgcgcaagtg
tccctaggggcccctcaagcctcctcggtgggctctgccacagtttcagccccatccggc
cttggccccgtcaacagtctggccatgggcctcaacactgcctccatgggtgccccagct
gcagccaccacagtttcagtctccacaacggcttcaaccattccctcttcagctacttcc
tcatccacacgcagttctgcagcatcctcagggaaagcacctccaaacctgccacccgga
gtgccccctcttctgcccaacccatacatcatggccccaggactactgcacgcctaccct
cctcaggtgtacggctatgatgacctacagatgctgcagacaagaataccgctggattat
tatagcatcccctttgcaactcccacaacagcactgactggcagagaaggcagcctgacg
agcaacccttattctggcgacttatcaaagtttggtcgaggtgatgcatcatccccggct
ccagccaccacgttagctcagacacaacagaaccagacccagacacatcacaccacacag
cagaccttcctcaacccggcgctgccacctggctacagctacacaagcctcccatactac
actggcatgccaggcctgcccaataccttccagtatggacctgctgtgtttccggtggct
cctacctcgtcaaagcagcacggtgtgaatgtcggcgtcaatgcatcagccacacctttc
cagcaggctagtggctatggttctcatggatacagcactggctatgaggatgtgggccag
gcttcagggagtggggatttctgtaagggcggatacggcactgccgtggccgctgccgct
tctgcacaaaacaagccagccagctctgtcaccgggcctggagtcggagtctctgtgaca
tcaagcaacacgggggtaccggatatttcagggtctgtttacacaaagacgcagtcattt
gagaagcagggtttccacgcgggcacgccggcagcttcgttcagcctgccctcggcttta
gggagcgggggacccatcaaccccccggctgctgctggctacgccccagccccattcatg
cacatcctggcaccgcaccaacaaccgcattctcaaattctgcaccaccacctgcagcag
gacggacagagcggcactggacagcgcagccagaacgcctccattcagcagaagtctcag
atcaacaagtcagcatacaacagctacaactggggggcaaactaa

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