Xiphias gladius (swordfish): 120786342
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Entry
120786342 CDS
T07311
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03013
Nucleocytoplasmic transport
xgl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120786342 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120786342 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120786342 (nup153)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120786342 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
120786342
NCBI-ProteinID:
XP_039977700
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All DBs
Position
LG24
Genome browser
AA seq
1531 aa
AA seq
DB search
MAATGGGKIRSRRYHIASKPYAKSKQQQSGLISRVTDTVKSIVPSWLQKYFKNEDAPEGG
GAVHGTDQNCQPPPPPPPPPPNGSEEGPPPIDGRDSPEPSTSNTEPSTSRASLNFQEYVL
SRPPLSRSHLHFPPLDASSPTLGASSNLFSQPSTSSAPGPFSTGFSLVKEIKDNLSQHED
DNISTTSGFSSRASDKDVPTSKTASLPQLWSPEMDRTNSGPQPSQSSLKKPAFNLSVFGT
SSSSTLNSTALNSSQLGDSPFYPGKTTYGGAAAVRSSRARPGTPYQAPVRRQIKAKPAGA
QPCGVTSATARRILQSLERMSSPLADAKRIPAAASSPLSPSMDGTNLDVTHFQSKKKRMD
STLPPVQKLVVPAAASVSGNRSVSFRPTLTPGVVSRTLDRTPRETPTRQSPKLPKATPGP
SQSIMGSSGPAYPLSSTPTASSVSSGGGKMKRERTSARPSTKRPEEDEVAEVPDLPTISL
PISTSALPTFSFSSPLPPLTTSTTISAASKVTAITPAKETFTNKEPQTALTPPCVPFTFS
SPIVKATAASPPSFSPSAGFTFSAPVAKLGPSMSNGKLASPIAAVVKPVANKSTEDFEGP
FKPAKVLKQGSVLDLLKAPGFSSPVAQTSPGPDNSPHQTSTQSTAPSSSSTTTPSLSSSA
GLGDLFKAPLNWSCDVCLVQNKPSDAKCVCCMAPQPNSSLSKSMDSKPSPTTSVGLESSS
TNATPTTTTTAGFGTMFSKPAGTWDCDTCLVLNKPDAVKCVACETAKPGTGLKPSLTLPS
AFTAVKTVPTPTAPVSTGFIGFGDKFKKPEGAWECDMCLVENKAEDIKCVACMSAKPGAS
AGASAGASAGSSSTTSTAPVFGLGDKFKKPEGAWDCDVCLVQNKAADIQCVACQAAKPGA
NVEPKAFGSSAGGISGSSTFGSCTSSSGGFKFGTSDSTSGSGSGGFKFGGSFSESSSSSS
SSGFKFGIPFGSSSSETTSKDTNASSGFKFGSSSEGFKFGASSSDDKKSDQPAAGSGFKF
GASGGIVFGTGSSSTESNSSKGGFTFGLSKPEDKTSETTTTTTTTTSSSVSFTPVSSQGK
SDISASSNDTTSINTNTTTTTTTGSVFGRLGEPSLATTTPQRASTFGSLQADKEPAAPTF
TFGKPDEKKEAAASSAPATFLFGAASKDADPTPAPATSGGFSFSKPSAPTEQPPPAFTFG
KPADKSETSALEVPKPSFTFGQSATDSAAAPKPAFSFMASNPTNTTNSTTSSSSTPTPTP
TPSLFGSGSSNSSGQAPAPSAAPSTFMFGQPAATSSDAPPAKTFVFGHNQESQPPASSAA
PLNSVTAPAPAQPFIFGASSNAAPPAAAPSFGFGAAAAAAAPSAVSSSAPSAAPSPFVFS
SAPTGGFGANQTPSFGSSFGSPFTAAPSQSPSFGAKPNTAPVFGQQANSTPVFGTAANSA
PGGGFQFGGASAFGATNNSSGVFTFGVGSAASPTPSASPSITPQPGAPGGGFNFSQPPTF
NIGSTKSFTASPAGQQSIAGRKIKTAVRRRK
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacgggtggagggaaaattagaagcaggagatatcacatcgcctctaaacct
tacgccaagagcaaacagcagcagtcaggcctcatcagtcgagtgacagacaccgtaaag
agcattgttccttcctggctgcagaaatacttcaaaaatgaagatgctcctgaaggaggt
ggggctgtacatgggacagaccagaactgtcagcctcctcctccccctcctcctcctcct
cctaatggcagtgaagagggacctcctcccattgatggacgtgactctccggagcctagc
accagtaacacagagccctcaaccagtcgagcttccctgaactttcaggagtatgtgctt
tctcgacctcctctgagtcgctctcacctccattttcccccactggatgcctcctccccg
accctgggggcttccagcaacctcttctcccagccctccacctcctcagcccctggaccc
ttttccaccggcttctccttggtcaaagaaatcaaggacaacctctcgcagcatgaagat
gataacatctccaccacgagtgggttctcctcccgcgcctctgacaaagatgtccccact
tccaaaacggcatcacttccccagctttggtccccagaaatggacagaacaaactctggg
cctcagccttcccagtccagtctgaaaaagcctgctttcaacctgtccgtctttggaacg
tcttccagttcgacattaaacagcacagctctgaactccagccagcttggagattcaccc
ttctaccctgggaagaccacctatggtggggcagctgcagtcaggagctctcgcgcacgt
cctggaacaccgtaccaggccccggtgaggagacagatcaaggccaagcctgctggtgct
cagccctgtggggtgaccagtgccacagccagacgcatcctgcagtccttggagcgcatg
tcgagccctctggctgatgccaagagaatcccagcggcagcctcatctcccctgtcacca
tcaatggatggcacaaatctagatgttacacatttccaatcgaaaaagaaaaggatggat
tctaccctcccaccggtgcagaagctggtggttcctgctgcagcctcagtgtcaggaaac
cgctccgtgtctttcaggcctactttgactcctggagtagtgagccgaactctggacagg
actccaagagagacgcccacaagacaatcaccgaaactacctaaagcaaccccaggtcca
tctcaaagcataatgggttccagtggcccagcctatcctctgtccagcacgcctacagcc
agcagcgtcagctcaggagggggcaagatgaagagagagaggactagtgcacgaccctcc
accaaacgccctgaagaggatgaggtggctgaggtacccgaccttccaaccatttcactt
cccatcagcacctccgccttgcccaccttcagcttctcctcccctcttccacctcttacc
acctccaccaccatcagcgccgcctccaaagtcacggccattactcctgctaaggaaaca
ttcacaaataaggagcctcaaacagccttgactcccccctgtgtaccttttacattttcc
tcccctattgtcaaagcaactgctgctagcccaccttccttttccccttcagctggattt
acttttagtgcacctgtagcaaagttaggtccctccatgtcaaacgggaagctggcctct
cccatagcagcagtggtgaagccagtagcaaacaaaagcacagaagattttgaaggaccc
tttaaaccagccaaggtcctgaagcagggaagcgtcctggatcttctgaaagcacctggt
ttttcctctcctgttgctcagacttccccaggcccagacaactctccccaccagacctcc
acacaatccactgccccctcctcctcatccacaaccaccccctccctctcttcttcagca
gggcttggtgatttgttcaaagcgccactaaactggagctgtgatgtctgcttggtgcaa
aacaagccatcagatgcaaagtgtgtttgctgtatggccccacagcccaactcctccttg
tcgaaatctatggacagtaagccttcacccacaacctcggttgggctggagagcagcagc
acaaacgccacccccaccactacaaccaccgcaggttttggcacaatgttttccaaacct
gcaggaacctgggactgtgatacatgtcttgttctaaacaaacctgatgcagtaaagtgc
gtggcctgcgaaacagccaaacctgggacaggacttaaaccctcactgactcttccttct
gccttcacagctgttaagactgtacccacccccacagcccccgtttccacagggttcatc
ggatttggagacaagttcaaaaaacccgagggtgcatgggaatgtgatatgtgtttggta
gagaacaaggcggaggacataaagtgtgttgcctgcatgagcgctaaaccaggggcttca
gcaggagcttcagcaggagcttcagcaggatcctcttctacaaccagcactgctccagtg
tttgggctgggagataaattcaagaagccagagggtgcctgggattgtgatgtctgtctt
gtacagaataaggctgctgatatacagtgtgtcgcttgtcaggcagccaaacctggagct
aacgtggagcccaaagcttttggttcatcagctggtggaatttcaggctcctctacattt
ggctcttgtacctctagttctggaggttttaagtttggcacatcagacagtacctcgggg
tctggatctggaggtttcaagtttgggggctcattttcagaatcctcctcttcttcatca
tcaagtggattcaaatttggaatcccattcggaagctcctcatcagaaaccacttctaaa
gacactaatgcctcatcagggttcaaatttggcagctcatctgagggctttaaatttggg
gcttcctctagcgatgacaaaaagtcagaccaacctgccgcaggttctgggtttaagttc
ggagccagcggtgggatagtgtttggaactggatcctctagtacagaaagcaactcctct
aaaggcggcttcacctttggactgtcaaagcctgaagataaaacatcggagaccaccacc
accaccaccaccaccacctcatcctctgtcagtttcacacctgtttcctctcaaggaaag
agtgatatttctgcatcatcaaacgacaccacatcaataaacaccaacacaaccaccacc
accaccaccgggtctgtttttgggagactgggagagccaagtttggcgaccaccacgcca
caacgggcctctacgtttggatccttacaggcagacaaagagccagctgctcccacgttt
acctttgggaagccagacgaaaagaaggaagctgctgcctcctcagctccggctaccttc
ctctttggtgctgctagtaaagatgcagatcctacaccagcaccggccacttcaggtggt
ttttccttcagcaaacccagtgctccaacagagcaacctccacctgcgttcacctttggc
aagccagcagacaagagcgaaacatctgctctagaggtcccaaagccctccttcaccttt
ggacaaagtgctacagattctgctgctgctccaaaaccagcattttcctttatggctagt
aatccaaccaacaccaccaactccaccacctcgtcatcctcgacccccacccccaccccc
acccccagtctgttcggcagcggcagcagcaacagctccggccaggctccagctccttct
gcagctcccagcactttcatgttcggtcagcctgctgcaacgtccagtgatgctcctcca
gctaaaacctttgtctttggccataaccaggaaagccagccgcctgcttcatcagctgct
cctctgaactctgttacagccccagctccagctcagcccttcatctttggtgcttcttcc
aacgctgctcctcctgcagctgctccatcctttggttttggagcagcagcagcagcagca
gcaccctctgctgtctcctcttcagctccctctgcagctccctctccgtttgtattcagc
tcggcccccactggtgggtttggggctaaccagactccttcgtttggctcatccttcgga
tcccctttcacagccgcaccctcccaaagcccatcctttggggccaaacccaacaccgcc
cctgtctttggacagcaggccaactccacacctgtatttgggacggctgctaattctgca
ccaggcggaggctttcagtttggaggagccagtgctttcggagccaccaacaacagctcg
ggtgtgtttacttttggagtgggttcagcagcttctcccaccccctctgccagcccctcc
atcacaccccagccaggagcccctggaggtggattcaatttttcacaaccccctacattc
aatattgggtcaactaaatccttcaccgcctctcctgctggacagcaatcaattgctggg
cgcaagatcaagacagcggtgcgacgcagaaagtag
DBGET
integrated database retrieval system
