Xiphias gladius (swordfish): 120786566
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Entry
120786566 CDS
T07311
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120786566 (rnf115b)
04121 Ubiquitin system [BR:
xgl04121
]
120786566 (rnf115b)
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120786566 (rnf115b)
Membrane trafficking [BR:
xgl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
120786566 (rnf115b)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120786566 (rnf115b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-rbx1
Zn_ribbon_19
zf-RING_5
DUF7560
Motif
Other DBs
NCBI-GeneID:
120786566
NCBI-ProteinID:
XP_039977998
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All DBs
Position
LG24:complement(17019458..17025757)
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AA seq
295 aa
AA seq
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MAEAAEEPRHRFFCHCCKCETDPKLPDFVCPRCDSGFIEEVTEDSSLLQGSTSVASEDSN
SLLSDLWQLLFMERSALLSHPPSAESHQDDSEQVSAGQSRPSPVSPGAAEARGPESSSQP
EQERSSRPEQRPAVEGIVQQFLAGLFANNGNPGAAPAALSSMLQLYSNPGDYAWGQGGLD
AVITELLGQLESTGPPPAEKEMISSLPTVCISQEQTDCRLECPVCREEYSLGESVRKLPC
LHYFHSHCIVPWLELHDTCPVCRKSLDGVDNSLPSTSQPPEARSIRTEQQERQAI
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggaggaaccgcgacaccggttcttctgtcactgctgtaaatgtgaa
acggaccccaaactcccggatttcgtctgccccagatgtgactctggcttcattgaggag
gtgacagaggactccagtctcctgcagggcagcacatcagtggccagtgaagattcaaac
tcgttgttatcagatttatggcagctgctgttcatggaacgctctgccctgctgtcgcat
ccgccctccgcagagtcccaccaagatgacagcgagcaggtatctgcaggtcagagccgt
ccttctccggtgtcaccgggtgctgcagaggcccgagggccagagtcttcttcccagccc
gaacaagagagatcatccaggcctgaacaaaggcctgcagtggaagggatcgtgcagcag
ttcttggccggcctgttcgccaacaacggaaaccccggtgctgcaccagctgcattatcc
agcatgctacagttgtactcaaacccaggagactatgcatggggtcagggaggtctggat
gctgttatcacagagttgttaggacagttggagagcacaggtccaccccctgcagaaaag
gagatgatctcatcgctgccaacagtttgcatctctcaggaacagacagactgcagactg
gagtgtccagtttgtagggaggagtattcattaggggaatctgtcaggaagctaccctgc
ctccattacttccacagtcactgtatagtgccttggctagagctgcatgatacctgccca
gtgtgccgcaaaagccttgacggtgtcgacaacagcctcccgtccacgtcccaacccccg
gaagcccgctccatcaggacagagcaacaagagaggcaggcgatctga
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