Xiphias gladius (swordfish): 120786576
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Entry
120786576 CDS
T07311
Symbol
rnf139
Name
(RefSeq) E3 ubiquitin-protein ligase RNF139
KO
K15703
E3 ubiquitin-protein ligase RNF139 [EC:
2.3.2.27
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120786576 (rnf139)
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120786576 (rnf139)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120786576 (rnf139)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRC8_N
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
120786576
NCBI-ProteinID:
XP_039978010
LinkDB
All DBs
Position
LG24:23858082..23867638
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AA seq
702 aa
AA seq
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MASTQARIGQQALAVLDVALRVPCIFIIDAIFNSYYDPGSGWAGAMGKVLVRVMGVLISS
VVLLLSQKALFKFYTLFFAVLLGMAAVLINYYATSHIDFYSAYYKAALGFRLLPRNGPTL
WLGMAAVQLVFGVGYVFLLNLQSVFAALVVLDIMIPLWGLMIELPADVRQLVAVFSGLAL
ALNTAVCLAMRLKWFYYSCRYVYLLVRHMYRIYGLQLLLEDTWKRIRFPDVLRVFWLTRV
TAQALILVYVVRAVGRESGDATGGAADGTSDSQGYLLSWDVFWDLTSNLIISGCDSTLTV
LGMSAVISSVAHYLGLSILAFIGSTEEEDKRLGFVAPVLFFILALQTGLSSLDPEERLVR
LSRNMCLLLTAILHFIHGMTDPVLMSLSASHVSSFRRHFPVLLVSLTLFALPVALSYALW
HHYALNTWLFAVTAFCVELCLKVVVSLTVYGLFMADGFSNVLWEKLDDYVYYVRSTGNII
EFLFGVIMFGNGAYTMMFESGSKIRACMMCLHAYFNIYLQAKNGWKTFINRRTAVKKINS
LPEMHGDQLRDIEDVCAICYQEFATSARITPCHHYFHALCLRKWLYIQDTCPMCHQRVYV
EEESRDRAAFSNNNGGYAAPQDAAAAVPPAPGENQHGRPAAELPANAAAAGAQAAGGPGE
LNDELLEDNDSIEYDEDEWGTQNGSTPIEEDYINDDTDSTED
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccactcaagcccggattggccagcaggccctagcggtgctggatgtggctctg
cgagttccctgtatctttattatcgacgccatttttaactcttactacgaccctggttcg
ggatgggccggggcgatggggaaggtgttggtcagagtcatgggtgtcctcatctccagc
gtggtgctgctgctctcccagaaagccttgttcaagttctacactctcttcttcgctgtt
ctcctcggcatggcagcagtcctcatcaactactacgccacttcccacatagacttctac
agtgcctactacaaagcagcactggggttcaggttgctgcccaggaatgggccgacgctg
tggctgggcatggccgcggtccagctggtttttggcgtgggctacgtattcttgctcaac
ctccagtcggtgtttgccgcgctggtggtgctggacatcatgatccctctgtgggggctg
atgattgagctgcccgcagatgtcaggcagctggtggccgtgttctcaggcctggcgctg
gctctcaacacggccgtgtgcctggccatgaggctcaaatggttctactattcctgtcgg
tacgtctacctgcttgtgcggcacatgtacaggatctacggacttcagctgctgctagag
gacacatggaagaggatcaggttccctgatgtgttgcgggtgttctggctgacccgggtc
accgcccaggcgctgatcctggtctacgtggtgcgggcggtggggagggagagcggtgat
gccacaggcggggccgcagacgggacctccgactcgcagggttatctgctgagctgggac
gtgttctgggatctgacgagtaacctgatcatctccggctgtgactccacgctcaccgta
ctggggatgagcgctgtcatctcctccgtcgcacactacctcggcctcagcatcctggcc
ttcataggttcgacggaggaagaggacaagcgtttaggcttcgtggctcctgttctgttc
ttcatcctggctctgcagactggcctcagcagcctggacccagaggaacgcctggttcgt
ctgagccggaacatgtgccttctgctgacggccatcctgcacttcatccacggcatgact
gaccccgtcctgatgtccctcagcgcctcccacgtctcctctttccgccgccattttcct
gtcctgctggtgtcgctgacgctctttgcgctccccgtggcgctcagctacgccctctgg
caccactacgccctcaacacctggctctttgccgtcaccgccttctgtgtggagctgtgc
ctcaaggtggtggtgtcactgacggtctacggcctcttcatggccgatggcttctccaac
gtcctgtgggagaagctggacgactacgtctactacgtgcgctccacaggcaacatcatc
gagttcctgttcggcgtcataatgttcggaaacggggcctacaccatgatgttcgagtcg
ggcagcaagatccgcgcctgcatgatgtgcctgcatgcctacttcaacatctacctgcag
gccaagaacggatggaagaccttcatcaaccgtcgcacagccgtcaagaaaatcaactcc
ctgccggagatgcacggcgaccagctgagggacatcgaggacgtgtgcgccatctgctac
caggagtttgccacctcggcccgcatcacgccctgccaccactatttccacgcgctgtgc
ctgaggaagtggctgtacatccaggacacgtgcccgatgtgccaccagagagtttacgtc
gaggaggagagccgagacagagccgccttctctaacaacaacgggggctacgcagcgccg
caggacgccgctgctgcggtcccgccggcaccgggggaaaaccagcatggacggccagcc
gccgagctgccggccaacgcggccgcggccggtgcgcaggccgcgggaggaccgggggag
ctcaacgacgagctgctggaggacaacgacagtatagagtacgacgaagatgagtggggg
actcaaaatggcagcacgccaatagaagaagactatatcaatgacgacactgactctacc
gaggactga
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