Xiphias gladius (swordfish): 120786849
Help
Entry
120786849 CDS
T07311
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xgl01009
]
120786849 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgl03021
]
120786849 (ctdp1)
Enzymes [BR:
xgl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120786849 (ctdp1)
Protein phosphatases and associated proteins [BR:
xgl01009
]
HAD phosphatases
Fcp/Scp phosphatases
120786849 (ctdp1)
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120786849 (ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
BRCT
PTCB-BRCT
Biotin_lipoyl
RTT107_BRCT_5
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
120786849
NCBI-ProteinID:
XP_039978497
LinkDB
All DBs
Position
LG24:5917710..5986847
Genome browser
AA seq
1002 aa
AA seq
DB search
MEDPAADSGGGGGGAGAEGPAVQVADICWPTGALPLRLLEWKVKPGSLVNVDSVLALCAP
IPQEKGAEAARLPEKKVKSDRAGVVKELCCQLGQVIPPGGVIVRVEECSHPIVMKGLCAE
CGQDLTQLQSTNGNQQTPISTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNKKLVLM
VDLDQTLIHTTEQHCQRMSNKLTRYFLQGIFHFQLGRGEPMLHTRLRPHCKEFLEKIAKL
YELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVC
IIDDREDVWKFAPNLITVKKYIYFQGTGDINAPPGSREAQMARKAGGPSSRPAESTESAG
TLGAEEHNNGLRKRAKDHSVSGKDEPTTSQSSQGVSTNERTHPTGVVEEESGQSKQSVSE
VVPGAGLREYQEGDRTNVKEDDTNRTQEAREGANSSAPSHESNNLDFELSSDSDNDSITE
KPPSSESDSEGKSCQATKPGQEPVTQESSDGDGARLGDSKGRCEGENSSAVAEPSGVILP
DPELGNGCLDRREPETESQNSEQSGVTMGEELLDQSMEDEEEEEEEADNDKDDHLIYLEE
VLERIHAEYYCRYEAYLRKEASETPDIRKIVPELKGKTLEGTMIVFSGLYPTNYPMERTR
EYYHAKVLGAKIGKNLVLNSQDPSRTTHLVAARAGTEKVRQAQGCKHLHVVNPDWLWSCL
ERWERVEEQLYPLKEDYSKTARSNSPAAFPDNQGSLRKPIFHTTLIHHRPLPPALEVRTY
DPVTGKLIRRGPQVSRPPPYFQASGSLMLSDHREQSSLRGTSKSQQDDVAGSSQDDEQPG
PSRRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGEESDNESEGRGKEKPGNEEVEDDD
EEEQQQQQTGAGQIAEGGLGPQAVSMEERLQTPSSEASVPGGVLRGHKRKHEEAKEDEDD
DEVENKQSADDSSKDSNEEEEGSSSEADEMAAALEAELNDFM
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcctgccgcagattctggcggtggcggcggcggtgcaggagcggagggcccc
gcggtgcaggtggcagatatctgctggccgaccggagctctcccgctacggcttctagag
tggaaggtcaaacccgggtctcttgttaacgtagactccgtgctagcactatgtgctccc
atacctcaggagaagggggcagaggctgccaggctgccggagaagaaggtgaaatcggac
cgtgctggagtagtgaaggagctatgctgtcaacttggacaagtcatacctcccgggggt
gtcatagtcagagtagaagagtgcagccacccgatagtgatgaagggtttatgtgctgaa
tgtggccaggacctgactcagttgcagagcacgaatgggaaccagcaaactcccatctcc
acagctacagtctccatggtgcacagtgtacccgagctgatggtcagctcagagcaagca
gaacagctgggcagagaagaccagcagagactccatcggaacaaaaagctggtcctgatg
gtggatctggaccagactctgatccacaccactgaacagcactgccagcgtatgtccaat
aagttaacacgttatttcctccagggcatattccacttccagctcggtcgaggagagcct
atgctccacacacgactacgcccacattgcaaggaattcctggagaaaattgccaaactc
tatgagctacatgtcttcacattcgggagccgcctttatgcacataccattgctggcttt
ctggatcctgaaaagaagcttttctctcatcggatcctttctagagatgaatgcatcgat
cctttctccaagacggggaatcttaggaaccttttcccttgtggggattcaatggtctgc
ataattgatgaccgagaggatgtttggaagtttgcacctaacctcatcactgtgaagaaa
tacatctacttccaaggcacaggggatatcaatgctccccccggctcacgggaagctcaa
atggccagaaaagcaggaggcccctcaagtcgaccggcagagagcacagaatcagcaggg
acgcttggtgcagaagagcataataatggcctcaggaaaagagcgaaagaccacagtgtt
tccggaaaggatgagcccacaacatctcagtcttctcagggagtatcaacaaatgaacgg
actcatcccacaggggttgtagaagaagaatcaggacaaagtaaacagtcagtgtctgag
gtggtgcctggggcggggttgagagaataccaggagggagatagaacaaatgtaaaggaa
gatgacaccaacaggacacaagaggcacgagaaggtgcaaactcatcagcacccagccat
gagtccaataatttggactttgaactttccagtgacagtgacaatgactccattacagaa
aagcctccctcatcagagagtgatagtgaaggaaagtcttgccaggcaacaaagcctgga
caggaacctgttacgcaagagtctagtgatggggatggggcaaggttaggggacagtaaa
ggtcggtgtgagggagaaaacagctctgctgtagcagaaccttcaggggttattctccca
gaccccgaactgggaaatggctgtttagataggagagagccggaaaccgagtcccagaat
agtgaacaatctggagtcaccatgggggaggagctgctggaccagagtatggaggacgag
gaggaggaggaagaggaagccgataatgacaaggacgatcacctgatctacctggaggaa
gtgctagaaaggattcatgctgagtactattgccgctacgaggcctacctgaggaaggag
gcctccgaaacgccggacatacgtaagattgtcccagaactgaaaggcaagacactggag
ggcacaatgatagtgttcagtggtctgtacccgaccaactacccaatggagaggacccgt
gagtactaccacgccaaggtgctaggggcaaagatcggcaagaatctggttctcaactcc
caagatcccagtcggacaacacatcttgttgcagcaagagctggtaccgagaaggttcgt
caggcacagggctgcaagcatctccatgttgtcaaccccgactggctgtggagctgtctg
gagcgctgggagagggtggaggagcagctgtacccactaaaagaagactactccaaaaca
gcaaggagcaacagtccagcagctttccctgataatcagggctccctgcggaagcctatt
ttccacacaactctcatccaccacagacccctacctccagccctagaggttcggacctat
gaccccgtcacagggaagctgatccgcaggggccctcaggtgtcacggccaccaccttat
ttccaggcatcagggtctttgatgctctccgatcacagagagcagtcttctctcagggga
acttcaaagagtcagcaggatgacgtggcagggtccagccaagacgatgagcagccagga
ccgtctcgtcggaaacgacaaccaagcatgtcagaaactatgcctctatacacactttgc
aaggaggatctagagagcatggacaaagaggtggacgacatcttaggtgaggagagcgac
aacgagagtgaggggcgagggaaggagaagccaggtaatgaggaggtggaggatgacgat
gaggaggagcagcagcagcagcagacaggagctggacaaatagcagaaggagggctcggt
cctcaggccgtgagcatggaagagaggcttcagacaccatccagtgaggccagtgtgcca
ggtggtgtgctaaggggccacaaacgtaagcacgaagaagccaaggaggacgaggatgac
gatgaggtggaaaataagcaatctgctgacgactcctccaaagactccaatgaggaagag
gaaggcagcagttcagaggcagacgagatggccgcagccttggaggcagagctcaatgac
tttatgtga
DBGET
integrated database retrieval system
