Xiphias gladius (swordfish): 120787454
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Entry
120787454 CDS
T07311
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04140
Autophagy - animal
xgl04148
Efferocytosis
xgl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120787454 (vps16)
04148 Efferocytosis
120787454 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120787454 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120787454 (vps16)
Membrane trafficking [BR:
xgl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
120787454 (vps16)
Hops complex
120787454 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
120787454
NCBI-ProteinID:
XP_039979054
LinkDB
All DBs
Position
Unknown
AA seq
841 aa
AA seq
DB search
MAFITANWNPLGEAFYRKTELYEMCWNLRDGLRDSLVAAAPYGGPIALLREPHRRSPSSR
PQLEIYSASGVAIASFPWKSGPVVQLGWTVSDELLCVQEDGSVLIYDLFGSFKRHFSMGQ
EVSQSQVLEAKVFHSPYGTGVAIVTGSSRFTLATNIDDLKLRRLPEVPGLQGKPSCWVVL
TQDRQTKVLLSHGPELYILDNTSCTAVVRQTDRQCPPGLSAQAGSIVHMSVSFSYKYLAL
FTDTGHLWAGSSHLQDKLSEVDTKKMTTPKQMVWCRRPKSQQPSVVLMWDRLLMVAGVCS
DTVQFPIEDPCVLVGELDGVRIISSKNQELLQEVPLVCQDIFKIASMAPGALLLEAHREY
EKSSQKADEYLREIKEQSMLGEAVRQCVEAAGHEYDTNTQKSLLRAASFGKCFLTDFSPD
QFVSTCRELRVLNAVRENTVGLPLTHTQFKQMTLQVLIDRLVYRQFYPLAIEICRYLKIP
DYQGVSRVLKHWASCKVQQKDLSDEAIARAVCMKVGDSPGVSYSHIAAKAYECGRTELAI
KLLDFEARSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVSYLKNEMNRGDFFMTLRN
QPVALSLYRQFCKLQEQDTLKDLYNQDDDHQELANYYVTASYREKRLESRVSLLQSAVDE
YNKAKNEFAAKATEDEMRLLRFQRKLDDEKGAGLLGLSLQATMEALLALGLNKQAEQLYR
DFRVPDKRYWWLKLKSLAEKEEWEELEKFSKSKKSPIGYLAFVEVCMKCNNKYEAKKYVS
RVTPEQKVKAHLAVSDLEGAADAAIERRSESEMGVVLSRCSASDRLLIDRLNRARCTAAK
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcatcacagccaactggaacccgctaggagaagctttctatcgtaaaacggag
ctgtatgagatgtgctggaacctacgtgacggactcagagacagtttggtagctgcagcg
ccatatggaggaccaatagctctcctcagagaacctcatagacgttccccgagttcacgt
cctcagttggagatttattcggcgtctggagtggccattgctagcttcccttggaagagt
ggtcctgtggttcagttgggttggacagtcagtgatgagttgttgtgtgttcaagaagac
ggatcagttctgatctacgatctgtttggatccttcaagagacacttcagtatgggacag
gaagtgtcccagagtcaggtgttggaggccaaagtgttccactctccttatggaacaggt
gttgccatagtaacaggctcctcccgcttcaccttggcaaccaacattgacgacctaaag
ctccgcaggttacctgaagtcccaggtctgcaggggaagccatcctgttgggtcgtcctc
actcaggacagacagactaaagtccttctttcccatggacctgaactctacattctggac
aacacatcctgcactgctgtggtgagacagacagacagacagtgtcctccaggtctcagt
gctcaggctggcagtatcgtccacatgtctgtgtctttcagctataaatacctggctctc
ttcactgacacgggacacctgtgggcaggctcctcccacctccaggacaagctgagtgaa
gtcgacaccaaaaagatgacgacgcccaaacagatggtctggtgtcgcagaccaaagagc
cagcagccatctgtggtgctgatgtgggacaggctccttatggtggccggagtctgtagt
gacacggtccagttccccatcgaggatccatgtgttttggtgggagaactggacggagtt
cgaatcatcagctctaaaaatcaggagctgctgcaggaggttcctttagtctgtcaggac
atcttcaagattgcatccatggctcctggagctctactgctggaggcccaccgggagtac
gagaagtcgagtcagaaggctgatgagtacctgagggagatcaaggagcaaagcatgctt
ggagaagcagtcagacagtgtgttgaggcggcaggtcacgaatacgacaccaacacgcag
aaatccctgctgagggcagcatcctttgggaagtgtttcctgactgacttcagtccggat
cagtttgtgtcaacctgcagagaactccgagtcctgaacgccgtcagagagaacactgtg
ggtctgccactcacacacacgcaattcaaacagatgactctacaggtgctgatagacagg
ttggtgtatcgacagttttatcctttagcgatagaaatctgtcgttacttgaagattcct
gattatcaaggagtcagtagagtcctcaaacattgggcttcatgcaaggtgcagcagaag
gacctatcagatgaggccatagctcgagcggtgtgtatgaaggtgggagactcacctggc
gtttcgtactctcacattgcagctaaagcttatgaatgtggacgcactgagctcgccatc
aagttgttggatttcgaggcccggtcaggagaacaggttcctctgttgctgaagatgaag
aggagtcagctggctctaagtaaagctgtcgagagtggagatactgacctggtgtacaca
gtcgtcagttacctgaagaatgagatgaacagaggagatttttttatgactctgaggaac
caaccggttgctctgagcctctacagacagttctgtaagctgcaggaacaggacactctg
aaggatctttataaccaagacgatgatcatcaggagcttgccaactactatgttactgcc
agttacagagaaaagaggctagagagccgtgtgtctctcctgcagagtgctgttgatgaa
tacaacaaggccaagaacgagtttgctgcaaaggccacagaggatgagatgcgtctcctt
cgttttcaacgaaaactggatgacgagaagggggcggggctgctgggactgtctctacag
gcgaccatggaggctctgttggcgttaggacttaacaaacaggcagaacaactttacaga
gactttagagtacctgacaaaaggtattggtggttaaagctgaagtctctggcagagaag
gaagagtgggaggagttagagaagttttctaagagcaagaagtctcctattggctaccta
gcttttgttgaagtttgcatgaagtgtaacaacaagtacgaagccaagaagtacgtttcc
agggtgacacctgagcagaaggtcaaagctcacctggctgtcagtgacctggagggggcg
gcggacgctgcaatcgagcgcaggagtgaatcagagatgggggtggtcctttccagatgc
tccgcgtctgaccggctgttgattgacaggctgaaccgagccagatgcaccgctgccaaa
aagtga
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