KEGG   Xiphias gladius (swordfish): 120788063
Entry
120788063         CDS       T07311                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120788063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xgl03041]
    120788063
Spliceosome [BR:xgl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    120788063
 Complex B
    120788063
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Transformer TcpA
Other DBs
NCBI-GeneID: 120788063
NCBI-ProteinID: XP_039979490
LinkDB
Position
LG3:complement(22733340..22749244)
AA seq 496 aa
MSDFEEFEKQLSENRQERERERHKKRSRSGSPGRGDKHRSWSKDRGSRSREKRSRSRDKK
SRDRRSSSRDHKKHSHSPRRTRKKRTCKYWDVPPPGFEHITPMQYKAMQAAGQIPTIALL
ATSTTTGVAAAPTQVPIVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQAP
SNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQP
AFHVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGY
AFCEYVDIGATDQVTVMCSFSVLRPLAVLFDLLLRALGLFLHQAVAGLNGMQLGDKKLIV
QRASVGAKNANPTSIIETPVTLQVPGLQRLQNSGMPTEVLCLLNMVMPEELVDDEDYEEI
LEDIREECCKYGSVRSIEIPRPVDGVEVPGCGKIFVEYVSAADCQKAMQALTGRKFANRV
VVTKYYDPDMYHRHEF
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgtcggatttcgaggaatttgagaagcagctgagcgagaatcgacaagagcgagaaaga
gagagacacaaaaagaggagtcgcagtggatccccgggccgaggcgacaaacatcgcagc
tggagcaaagaccgagggagccgcagccgagagaaacgcagccggagcagagacaagaag
agccgggaccgaaggagctcctcccgggaccacaagaagcacagtcactctccgaggcga
acgaggaagaaaaggacctgcaaatactgggatgtgccccctcccggctttgaacacatc
acaccaatgcaatataaagctatgcaagcggccggacagataccaacaatagctctgctg
gcaacatccaccaccactggagtggctgcagcgccgacgcaagtgcccatagttggcagt
cagatgacaagacaggccagacgcctttatgtcggaaacatccccttcggagtgaccgag
gagtccatggccgagttctttaatgctcagatgaggcttgcgggcctctcacaagctccg
agtaaccctgtactcgctgtgcagattaatcaggataaaaactttgctttcctagagttt
cggtctgtagacgagacgacgcaggccatggccttcgatggaatcattttccagggtcag
tcgctgaagattagacgacctcacgactatcggcctttgcccggtatctcagagcagcca
gctttccacgtcccaggtgtcgtctccaccgtcgttcccgattccccccataaactgttt
ataggaggcctgcctaactatcttaatgatgaccaggtaaaggagctcttgacatcattc
gggccgctcaaagcgttcaatctcgtgaaggacagtgccacgtcactgtcaaaaggttac
gccttttgcgagtacgtagacatcggcgccactgatcaggtaacggtgatgtgtagcttc
tctgtgttaagaccgttggccgtgctgtttgatctgctgctcagagctcttgggctgttt
cttcatcaggcagtcgctgggctcaatggaatgcaactgggagacaaaaagctgatagtc
caaagggcgagcgtgggagctaaaaacgccaatcctacctccatcatagagaccccggtg
acgctgcaggtgccggggcttcagaggctgcagaactctggcatgcccacagaggtgctg
tgccttctcaacatggtgatgcccgaggagctggtggacgatgaagactacgaggagatc
ctggaggacatccgcgaggagtgctgcaagtacggcagcgtccgctccatcgagatcccc
cggcccgtcgacggtgttgaagtccccggctgtggaaagatctttgtggagtatgtctcg
gctgcagactgtcagaaagccatgcaagccctcaccggccgcaagtttgccaacagagtg
gtggtcaccaaatactacgatccagacatgtatcacagacacgagttttaa

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