Xiphias gladius (swordfish): 120788103
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Entry
120788103 CDS
T07311
Symbol
ubtf
Name
(RefSeq) nucleolar transcription factor 1 isoform X1
KO
K09273
upstream-binding transcription factor
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120788103 (ubtf)
03021 Transcription machinery [BR:
xgl03021
]
120788103 (ubtf)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
120788103 (ubtf)
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
120788103 (ubtf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120788103
NCBI-ProteinID:
XP_039979559
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All DBs
Position
LG3:complement(21118600..21130409)
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AA seq
845 aa
AA seq
DB search
MVGWRRAACALSGGRRRERWRRGGRTISAGTGARDRRRSAGYRSTLPFFLHNDAEAHAER
QALCSSEINQPLWHGTDEVGHTRISCPLRRGRNWIRPRRHKTVKPQMNGEMEATTQDQVW
AQDDLLKLLEAMKVALPQKDLTKYKTSESHLDWQKVAFNAFTAEMCKQKWQEVSKEIRKF
RTLTELIVDAQDYIKNPYKGKKIKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDL
TKILSKKYRELPDKKKKKYVEDFLRDKEAFVQSMMKFREEHPDLVESMTKKGSNVPEKPK
TPQQLWYNHEKKAFLKTHPDATTKDIKDSLGKQWTQLSDKKRLKWITKSLEQQKQYEETM
REYIQQHPELNMTQGDIVKSTLTKAERHLKDKSDGRPDKPPPNGYSMFCAELMSSMKDVP
STERMVMCSQRWKLLKQNEKDGYQKRCEQRKKEYEIEMNRFLSSLSVEEQQRVLGEDKIG
LKRGSGANSPASKKKSPKAKANPEKPKRPISAMFIFSEEKRPKLQQERSDLSDSELTRLL
ARMWNELPDKKKEKYKRLETVLKAESERKEKEDRSRLPDPPKNAQDIWQQSVIGDYLARF
KNDRPKAQKAMEATWSTMEKKEKIMWIKKAAEDQKRYERDLCEMRSPAAAIASGKKMKFE
GEPKKPPSNGYQKFSQEMLSNGELNHLPMKERMAEIGSRWQRLPLKDKDRYKKIAEEKQR
QYKVQLEQWLASLSSQERNTYKEYNSQKRRTTAKPGGPKAKSKKSDTEEEEEEEEDDEDE
EDEDDEQEKASSEADSSSEDDEDDEDDDDDKEEDEDDDEAEDKENKSEDSSSESNSPGTS
DSDSD
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggttggatggagaagggctgcttgcgcgttgagtggagggagacggcgagagagatgg
aggcgggggggaaggaccatctctgcggggactggagcccgggaccgacggcgcagtgct
ggctatcgttcaaccctccccttcttcctccacaacgacgccgaggctcacgccgagaga
caggctctttgtagtagcgaaataaaccaaccgctgtggcacggtacagacgaggtcggc
catacccgaatttcttgtcctctacggcggggaagaaactggataagaccccggagacac
aagaccgtaaaaccacaaatgaatggagaaatggaggcaaccacccaagaccaagtttgg
gcgcaggatgaccttttaaaattgctggaggccatgaaagtggccctgcctcagaaagac
ctgactaaatacaaaacatcagagtcccaccttgactggcagaaggtggccttcaatgcc
ttcacagcagagatgtgtaagcagaagtggcaggaggtctctaaagagatccgtaaattc
aggactttaacagaactgatagttgatgctcaagactacatcaagaacccttacaagggc
aagaaaataaagaaacatccagatttccccaagaagcccttgactccatacttccgcttc
ttcatggaaaagagggccaaatacgcaaagttgcaccctgagatgagcaacctagatcta
actaaaatcctctccaagaagtacagggagttgcctgacaaaaagaagaaaaaatatgtt
gaagacttcttaagagacaaagaagcatttgtgcaaagtatgatgaagttcagggaagaa
cacccggaccttgtggagagcatgaccaagaaagggtcaaatgttccagagaagcccaag
acaccccagcagctgtggtacaaccatgaaaagaaggccttcctcaaaacacacccagat
gcgaccaccaaagacattaaggacagtcttggcaaacagtggacacagctgtctgacaaa
aaaagactcaaatggatcacaaagtccctggagcagcagaaacagtacgaggagacaatg
cgggagtacatacagcagcacccggagttaaacatgacccaaggggatatcgtaaagtcc
accctgaccaaggctgagaggcacctgaaggacaaatctgacggcagacctgacaagcca
ccaccaaatggttactcgatgttctgcgcggagctgatgtcgagcatgaaggacgtaccc
agcacggagcgtatggtgatgtgtagccagcggtggaagctgctgaaacagaatgagaag
gacggctatcagaagcgctgtgaacagagaaagaaggagtatgaaattgagatgaacaga
tttctcagtagtttgtcggtggaggagcagcagcgggtcctgggcgaggataagataggt
cttaagagaggcagtggagccaacagccctgcctccaaaaagaaaagccctaaggcaaag
gccaatccagagaaacccaaaaggcccatttcagccatgttcatcttctctgaggaaaaa
cggcccaaactgcagcaggagcgatcagacctttctgacagtgaactcacaagactgctg
gcacgtatgtggaatgaacttccagataaaaagaaggagaagtataaacgcctagaaacg
gtcctgaaggcagagtcagagaggaaggaaaaggaagaccgtagtcgtctgccagaccca
cccaagaatgctcaggacatctggcagcagagtgtcataggagactacctggccagattt
aagaacgaccggccaaaggcacagaaagcaatggaagcaacttggagcaccatggagaaa
aaagagaagatcatgtggatcaaaaaggcagcagaggaccagaaaagatatgagagagac
ctgtgtgagatgcgctcacctgctgctgccattgcctcagggaagaagatgaagtttgag
ggtgaacccaagaaaccaccatcaaatggatatcagaagttctctcaggaaatgctgtcc
aacggagagctaaatcacctcccgatgaaagagcggatggctgagatcggcagccgctgg
cagagattaccgctgaaggacaaggaccgctataagaagattgctgaggagaaacagagg
cagtataaagtccaactggaacagtggctcgctagtttgtcttcacaagagagaaacact
tacaaagaatataattcacaaaaaaggagaacaacagcaaaaccaggaggccccaaggca
aagtccaagaaatctgacacggaggaggaggaggaggaagaggaggacgatgaggacgaa
gaagacgaggacgatgagcaggagaaagcttcctctgaagcagactcatccagcgaggat
gatgaagacgatgaggatgacgatgatgacaaggaggaggatgaagatgatgatgaggcg
gaggacaaggagaacaagtcagaggacagcagcagcgagtcgaattcaccagggacgtca
gactctgattcggactga
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