Xiphias gladius (swordfish): 120788277
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Entry
120788277 CDS
T07311
Symbol
ciita
Name
(RefSeq) uncharacterized protein ciita isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xgl01001
]
120788277 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xgl04054
]
120788277 (ciita)
Enzymes [BR:
xgl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120788277 (ciita)
Protein kinases [BR:
xgl01001
]
Serine/threonine kinases: Other
TAF1 family
120788277 (ciita)
Pattern recognition receptors [BR:
xgl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120788277 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
AAA_16
LRR_14
nSTAND3
AAA_22
nSTAND_NTPase5
LRR_8
LRR_4
NPHP3_N
Rx_N
AAA
TsaE
Motif
Other DBs
NCBI-GeneID:
120788277
NCBI-ProteinID:
XP_039979857
LinkDB
All DBs
Position
LG3:complement(9873416..9896309)
Genome browser
AA seq
1688 aa
AA seq
DB search
MAQFEEVLDGVRLALTWASPAEIQVLLEGLVEERIISDAYSKTLSLHRLTEGIAHVSNQG
KPAWKPGSDHIHSRGSTTHQGLLSQVRKYESSKSRESAVIDHNQTRLESVLSLHENNSTR
SSPKMHPMYEDQVNHGNNPTLIRELGRGAEMDEHCLNHMITPTPMTCDDQFTFRFNDEIS
ELLRSAESMQKRISDNDRMVERNTEDEKEWLEQVEEAARRIAVPLWQHWDRGRKLLLPLV
PCMTIGCATSENTVTGCEAQCHDLNMEVETELAISCRKLDLYTNNFKCMEADITDTSFTL
DTEGPTDLLKDLCFSAFDSVATAGLNTGQVSNCGEAANASLVEACTATATNNNITDTYLG
GHLSVCWLADGTTATADDLICLTGDAQCRTDAGFKDVTDLLSPCTPKDTQTDAQDSSFYS
KIDLSMTFGVLDNLEHVFRTAYSTTRCSIDSITDFHENKEDEERDESHWGAKMQEVDLDP
FIPPDLGDLPDDISEFMNDDYLLGTDGLFSDLWLNCEEFNIFSDPAVPVELPCPGNHQQR
QVDRPTGKANNRRKRESVPRSRRCNDETTPSRPKRHRAAGKPRTEAVQVESAVTQSTDAG
SEPAETAGLTTTPPKILHFHPSIQFITIPDAPGYQVVQALRLSPPVIRLPLPNTATTPTY
ILVPAASQTCNHQVQPLSPVDGAVVPVQMSSSPPGSLSDTASKAISSPCNSPLSPSNEMS
PCKDLPLPQSPTVLDIPQVVKDYIQEVKAHMSQTCQDMDEGLNLTSHYVDMQVSLREILR
SGKNTNKCLDKELVIMGDTERQQSFLGKSQIFEGSNGDKSRRYILLLGNAGMGKTTLIRK
LCLDWSRDCIPQFDFVFLLDGKALTLTTPTYSLQTLLLNLSSFAPSCMDPEEVYTQILAA
SKRVLVIFDGFDELRDYEILLQTQEKDLVTSLQKDSKSQTYTVRQLYSAILQRVLLPGCT
LLLSTRPRGTASQLLRRADSFLELCGFTPTDVETYLSQYFTDPALRTAALDCIKNCSYLH
LLCWNPGLCRLVCLVLEQSKSLEDLPRTLTGLCHQVLCLKMEKDSKSTHSQAEVQTQTSP
QSEEETQTQISSNNQTKRCHKNTQTKSRAQRRRRRRWAKKEEKEENEWDGGEMKSVGREI
VRTEERELLSQLSSFAWEGVKANSSILPTAQTLSAKLKAFGLRTRLLLSHPLRTRQVVSS
GEWEGRGRQDKDEMGGREKGDREGNKGRKDDENFDTSDDHIVSWANPFLQSYLAGVHLAL
SRNVSDRTFLQTLPFHSGPKGRRRPQREELELTQRFAVGLLFHNRIELQRLHSYTEKSFR
DIVVSKQALVTNHLEGLSHCDLSPAQVLEACHHVYEASFTHGDGSRDSGGTRLVSHLAAN
LPEVLTFHGVPLNLPDVFTMQKVLQRGGTEGRSFCLDLEDSGIQVSGLRALVGLNNINTF
RACIADVITLWEQLEQSGEEGLLRGAVSKFKIHPLKATQVCHVEHLANLVNIHMHKRLLE
SCSQLDSILAEGVPAVKELHKLEFELGPEKGPLGLPKLSELLPGLHNLQHLDLENSKIGD
KGAEKLADALASLCSLEILNLSQNCIGDHGVKKLATTLRDLPKLHCLSLYSNLISDEGAE
SLAAVLPHMVSLTDLDVKYNKLTDVGAQSLGTSLRNCQRIKTLRMWNQCIPYGVFERLQQ
QDSRILWH
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttcgaggaggttctggacggagtgcggctggctctgacctgggcctcccct
gctgagatccaagttctgctggagggtttggttgaggagcggatcatctcagacgcctac
agcaagaccttgagtctccatcgacttactgaggggatcgcacatgtgtctaatcagggc
aaaccagcatggaaaccaggatctgatcacattcattctcgaggatccaccacccaccaa
ggtcttcttagccaggtgaggaaatatgagtcatcaaagtcgagagaatctgccgtcatt
gaccacaaccagacaagactggagtctgtattatcactgcatgaaaataacagcacaagg
tccagtccgaaaatgcatccaatgtatgaagatcaagttaatcatggaaataatcctaca
ctaattcgggaattggggaggggggcagagatggacgaacactgcctcaaccacatgatc
acgcctacaccaatgacatgtgatgaccagttcactttcagattcaatgatgaaatctca
gagttgctgagaagtgcagaatctatgcagaagcgaataagtgataatgacagaatggtt
gaaaggaatacggaggacgagaaggagtggttagagcaggtagaggaggcggctaggagg
atagctgtccctctatggcagcactgggacagaggacggaagttgttattgcctctggtt
ccttgtatgactattgggtgtgcgacaagtgaaaacacagtgaccggctgtgaagcacaa
tgccatgatttgaatatggaagttgaaacagagctcgcaatttcctgcagaaaactggat
ttgtacaccaacaactttaagtgtatggaagcagatattacagacacaagcttcacactg
gatacggaaggaccaactgacttgctgaaagacctctgtttctctgcatttgacagtgtg
gcgacggctggattgaataccggtcaggtcagtaactgcggagaggcagcaaatgcttca
cttgtagaggcctgcacagccacggccacaaacaacaacatcacagacacctatctgggg
ggacatctcagtgtctgctggttagctgatgggacaacagccacagcagacgacctgata
tgtttgacaggagacgcacaatgtcgcacagacgccggatttaaagacgtgacagatttg
ctttcaccttgtactccaaaagacactcaaactgatgcacaggatagctcattttactca
aaaatagatcttagcatgacattcggtgttctagacaacttagaacatgttttcaggact
gcttacagcacaacaagatgcagcattgatagcataacagacttccatgaaaataaagag
gatgaggagagagatgagtcacactggggtgccaagatgcaggaagtagatctggaccca
tttatccctccagatttaggagatctaccagatgatatatctgaattcatgaacgatgat
tacctgttgggtacagatgggctctttagcgatttgtggttgaattgtgaggaattcaac
atcttcagtgaccctgctgtgccagtagagctgccttgccctggcaaccaccagcagcga
caggtggacagaccaacaggcaaagcaaataacaggagaaaacgagaaagcgttcctcgg
tcacggcggtgcaatgatgagaccacaccatccagaccaaaaaggcacagagcagcaggt
aaaccacgaacggaagcggtacaggtggagtcagctgtcactcagagcacagatgcagga
tcagagcctgcagagacagcgggccttaccaccactccaccaaaaatccttcacttccat
ccctccattcagttcatcaccatcccagacgctccaggatatcaggttgttcaagctctg
aggctctctcctccagttattagacttccactccccaatacagccactacacctacatac
atattagttcctgctgcctcacaaacctgcaatcaccaagtacaaccactctccccggtt
gacggtgcggtagtgccagttcaaatgagttcttcgccaccaggatctctgtcagacact
gctagcaaagccatctcttctccttgtaactcaccactctcccccagtaatgagatgtcc
ccatgtaaagacttacctcttcctcagtctcccactgtccttgatattccacaggttgtg
aaggactacattcaggaagtcaaagcccacatgagtcaaacttgccaggatatggatgag
ggccttaacctgacatctcattatgtggatatgcaagtgagcctgagggagattcttcgc
tctggaaaaaacacaaacaaatgcctggacaaggagctagtcatcatgggagatacagaa
cggcaacaaagctttttggggaagagtcagatattcgaaggctcaaatggagataaatcc
agacgctacatattgctacttggtaatgcgggcatgggaaaaaccaccctgatcaggaag
ctgtgtcttgactggtctagagactgcatcccacaatttgactttgtcttcttattagat
ggcaaagcgctcactttgacgacgccaacgtatagccttcagaccctcctgttaaacctc
tcctcctttgccccttcctgcatggaccccgaggaagtgtacactcaaatccttgcagcc
tctaagcgtgtgctcgtcatttttgatgggtttgacgagttgcgggactatgaaattcta
ctccagactcaagaaaaagacttggtaacatcattacagaaagacagtaaatcacagacc
tacacagtaagacagttatactctgccatacttcagagggtccttcttccaggatgcact
ctcctgctctctacccggccaagaggcactgccagccagcttctgcggcgggcagacagc
tttctggagttatgtggctttactcccacagatgtagagacatatttgtcccagtacttc
actgatcctgccctcagaactgctgctttggactgcataaaaaactgcagttatctacat
ctcctctgctggaaccctggactatgtcggttggtttgcctggttttggaacagtccaaa
agtttggaggacctaccaagaactttaaccgggctctgccatcaagtgctttgtttgaaa
atggaaaaggacagtaagagcacacactcacaggccgaagttcaaacacaaacatccccg
caatctgaagaagaaacccagacacaaatctcaagtaacaatcaaacgaaaaggtgtcac
aaaaatactcagacaaagtccagagcacaaagaagaagaagaagaagatgggcaaaaaag
gaggagaaagaggaaaatgaatgggatggaggtgagatgaagagtgttggaagggagata
gttagaacagaggagagagagttgctgtcccagctgagctcttttgcctgggagggtgtt
aaagccaactcgtccatccttcccacagctcagacattatctgccaaactcaaggctttc
ggcctcaggacaaggctcctcctttctcaccccctgaggacaaggcaggttgtttcaagt
ggtgagtgggagggaagagggagacaggacaaagatgaaatgggaggaagagagaaggga
gacagggagggaaacaaagggagaaaggatgatgaaaactttgacaccagtgatgaccac
atcgtgtcgtgggccaaccctttccttcagagttacttggcaggtgtccatctggctttg
tcaaggaatgtatcagaccgcaccttcctccagaccctccctttccattcaggaccgaag
ggacgtcggcgacctcaaagagaggagctcgagctcactcagcgatttgcagttggcctc
ctcttccacaacagaatagagctgcagaggcttcactcatacacagagaaatccttcaga
gatatcgtggtcagcaagcaggctttagtaacaaatcaccttgaaggtctttctcactgt
gacctgagtcccgcccaggtcctggaggcatgtcaccatgtttatgaagcaagtttcacg
cacggtgatggtagcagagacagtggtggcacacgactggtttctcacctggcagcaaat
cttccagaagtcctgacatttcatggagttccactcaacttgccggatgtgttcactatg
cagaaagttctccaaaggggtggaactgaagggagaagtttctgcttggatctggaggat
tctgggatacaggtttctggactgagagcactggtggggctcaacaacatcaacacattc
agggcttgcattgctgatgttatcaccctatgggagcagctagagcagagtggtgaagag
gggctcctacgaggggcggtgtccaagttcaagatccaccctctgaaagccacacaggtg
tgtcatgtagagcacctggcaaatctggtgaacatacatatgcacaagaggctgttggag
agttgcagccaattagattccatcctggcagagggggtaccagctgtcaaagagctacac
aagctggagtttgagcttggtccagagaaaggtcccctgggtcttcccaaactgtcggag
ctactgccaggtctacataacctacagcacttagatctagagaacagtaagataggggac
aaaggagcagagaaattggctgatgctttagcctcactctgttcccttgagatactgaat
ctgtcacagaactgtataggagaccatggggtgaagaaacttgcaactacgctgagggat
ctccccaaactgcactgtttaagtctctacagtaatctgatttctgatgaaggggcagag
agtttagcagctgtcctcccacacatggtgtctctcactgacctggatgtgaagtataac
aagctgacagatgttggagcacagagccttggaaccagtctgagaaactgtcaaaggata
aagactttaaggatgtggaaccagtgtattccatatggagtgtttgaacgtcttcagcag
caggacagccggatcctttggcattag
DBGET
integrated database retrieval system
