Xiphias gladius (swordfish): 120788307
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Entry
120788307 CDS
T07311
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl00260
Glycine, serine and threonine metabolism
xgl00630
Glyoxylate and dicarboxylate metabolism
xgl00670
One carbon pool by folate
xgl01100
Metabolic pathways
xgl01200
Carbon metabolism
xgl01230
Biosynthesis of amino acids
xgl01240
Biosynthesis of cofactors
xgl04981
Folate transport and metabolism
Module
xgl_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
120788307 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120788307 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
120788307 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
120788307 (shmt1)
Enzymes [BR:
xgl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
120788307 (shmt1)
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
120788307
NCBI-ProteinID:
XP_039979932
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Position
LG3:8399361..8405485
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AA seq
482 aa
AA seq
DB search
MSLTKVDSVSKETWDSHNKMMLEPLIINDSEVFSIIKREKHRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHIDELERLCQKRALEAYGLDSEKWGVNVQPYSGS
PANFAVYTAVVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPETGYI
DYDRLQECARLFHPKLIIAGTSCYSRNLDYARMKQIANENGAYLMGDMAHISGLVAAGVV
PSPFDYCDIVSTTTHKTLRGCRAGLIFYRKGVRSVDAKGNETFYNFESLINQAVFPGLQG
GPHNHAIAGVAVALKQAMTPEFKAYQIQVLANCKALSSALIDHGYKIVTGGSDNHLILLN
LRSKGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGLVQEDFRKVA
EFIHRGIELTLEVQISLDPKATLKEYIQAFSQGEKFQQRVAEIRAEVEAFAGQFIMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaacaaaagtcgacagtgtgagcaaagaaacatgggactcacacaacaagatg
atgctggagcctctgatcatcaatgactctgaggtcttttccatcataaaaagagagaag
cacaggcagacatatggtctggagctgatagcatctgagaactttgccagcagagctgtt
ctggaggccctcggttcctgtatgaacaacaagtactctgagggataccctggacagagg
tactatggaggtacagagcatattgatgagctagagagactctgtcagaagagggcactg
gaggcctatggtctggactcagagaaatggggagtcaacgtgcagccatactcgggttct
cctgctaactttgctgtctacacggccgttgtggagccacacggcaggatcatgggtctg
gaccttcctgatggaggtcacttgacacatggcttcatgactgacaagaagaaaatctca
gcaacgtccattttctttgagtccatgccgtataaggtgaatccagaaactggctacatt
gactatgacagactgcaagaatgtgcacggctgttccaccccaaactcatcattgcagga
acaagctgctattcccgcaaccttgactacgcccgcatgaagcagattgctaatgagaat
ggtgcatatctgatgggagacatggctcacatcagcggcttggtggcagctggtgtggtg
ccttcaccctttgactactgtgacattgtttccacaacaacacacaagacgctgcgtggc
tgccgtgctggacttatcttttacaggaaaggtgtgcgcagtgtggatgccaaggggaat
gagactttttacaactttgagtctttgatcaatcaggctgtatttcctgggctgcaggga
ggaccacacaaccacgccattgcaggtgttgccgtagctctcaaacaagccatgacacca
gagttcaaggcctaccagatacaggttcttgctaactgtaaagctctgtccagtgccctt
attgaccacggctacaagattgtcactggcggctctgacaaccatctgatcctgctgaac
ctgcgcagcaagggaactgatggaggacgagctgagaaggttctggaagcctgtgccatt
gcttgtaataagaatacctgtccaggggataagagtgctttgcgccctagtggtctgagg
tttggctctccagctctgacctccagaggcttggtacaggaggacttcaggaaggtggct
gagttcattcacagaggtattgagctgaccttggaggtgcagataagtctagatcccaag
gccactttgaaggagtacattcaggcattttcccagggagagaagttccagcagcgggta
gcagagatcagggccgaagtggaggcttttgctggtcagttcatcatgcctggcctacct
gagctgtag
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