Xiphias gladius (swordfish): 120788425
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Entry
120788425 CDS
T07311
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120788425 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgl03021
]
120788425 (gtf2f1)
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
120788425 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
120788425
NCBI-ProteinID:
XP_039980176
LinkDB
All DBs
Position
LG3:complement(11594514..11600313)
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AA seq
533 aa
AA seq
DB search
MTSLGSSSSSSTEYTVRVPKNTSKKYNIMAFNAGDRVSCSTWTQARMERDMSARRIYGEE
ETTEGAAGSEFGRKQREEARRKKFGIVTREFKVEDQPWILKVNGKAGKKFRGLKKGGVTE
NASYYIFTQCPDGAFEAFPVHGWYNFTPLAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RLREQERGDDEEDETEKSGKRKKKGGGSKGGELRIHDLEDDLEMSSDDSDSSMGEDGESK
TKVKKDTGKGKAKKKKRKSNENEALEDSDDGDYEGLEVDYMSDESSSDEEPEKGKPAKGE
DLPKGIDEASESEEESEEEKQNDEETKEEEEEEEGKKTPVQMEKKKKKESSGESDSSDDS
DIEGETASALFMKKRTPPKRGGGRGSAGSSRTGSRPGTPSIDSASTSNTLRAAASKLEQG
KRQTQGPATDSPAAKRLKMEPSSQSPVPSGKSTPQPPSGKSTPSSSDVQLTEEAVRRYLI
RKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFYLTE
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgcttgggagcagcagttcctcatccacagaatacacagtgcgggtccccaaa
aacaccagcaagaagtacaacatcatggctttcaatgcaggagacagagtcagctgttca
acgtggacacaggctcgtatggaaagagacatgagtgctcggcggatatatggggaggaa
gagacaacggaaggtgcagctggtagtgagtttggcagaaagcagcgtgaggaagcacgg
cggaagaagtttggtattgtgacacgtgagttcaaagtggaggaccagccctggattctc
aaggtcaatggcaaggccggcaagaagttcagaggtctaaagaagggcggtgttaccgaa
aatgcatcctactacatctttacacagtgtcccgatggagcttttgaggccttccctgtc
catggctggtacaactttacaccgctggccaagcaccgaactctcactgctgaggaggct
gaggaggagtggggcaggagaaacaaggtggtgaatcacttcagcatcatgcttcagagg
cgtctccgggagcaggagcgtggtgatgatgaggaagatgagacagagaaatcagggaag
aggaaaaagaaagggggtggcagcaaagggggcgaactgcgtattcacgacctggaagat
gacctggagatgagcagcgatgacagcgacagcagtatgggggaagatggagagagcaag
acaaaggtgaagaaagatacggggaaaggaaaagcaaagaagaagaagagaaagagcaat
gagaatgaggccttggaagacagtgatgatggtgactacgagggtctagaggtggattac
atgtcggatgaaagcagctcagacgaagagccagaaaagggaaagcccgccaaaggagag
gacctccctaaagggattgatgaggcatctgaaagtgaggaagagagtgaggaggagaaa
cagaatgacgaggaaacaaaagaggaggaagaagaggaggaaggaaagaaaaccccagtc
caaatggaaaagaagaagaaaaaggagagcagcggcgaatcggacagctcagacgacagt
gacatcgaaggagagacggcctctgcgttgttcatgaagaagcgcactcctcctaaacgt
ggaggtgggcgtggctctgcaggcagctccaggactggaagtcgtcctgggacaccatct
atagactctgcctccacctccaatacactccgtgctgcagccagcaagctagagcaaggg
aagagacagactcagggtcctgccactgactcaccagccgccaaaaggctgaagatggaa
cccagcagtcagagccctgttccctctgggaagagcacgcctcaacctccatcaggaaaa
tccacccccagctccagtgatgtgcagctaacagaggaagcagtccggcgctacctgatc
cgtaaaccaatgaccaccaaagacctgctgaagaagttccagaccaagcgcacaggtttg
agcagtgagcagactgtcaacgtgctggcacagatcctgaagcgcctcaacccagagcgc
aagaatgtgaatgacaaaatgcacttctacctcactgaataa
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