Xiphias gladius (swordfish): 120788438
Help
Entry
120788438 CDS
T07311
Symbol
abca3b
Name
(RefSeq) ATP-binding cassette sub-family A member 3 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120788438 (abca3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xgl02000
]
120788438 (abca3b)
Transporters [BR:
xgl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
120788438 (abca3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_15
AAA_22
SRP54
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-GeneID:
120788438
NCBI-ProteinID:
XP_039980207
LinkDB
All DBs
Position
LG3:14638756..14671038
Genome browser
AA seq
1707 aa
AA seq
DB search
MAIMRQFGLLVWKNYLQQKRQILVTLVEILLPLLFSGILIVLRQKVPFKDYPNATVYESY
TVDKLPKTFLQHLQLAYVPGNSSVVRHVAEDVRGSLFLSSVRGFETEEQFEDYVRNDALS
RKLLAAVVFEHPFSHDDESLPLKVSYHLRFSFTPRNAPPKEKSELNPNSDLDWHTLSLYP
LFQLPGPREQYDKEGGTPGYFREGFLAVQHAVDRAIMRSYNRTAAASLLRQIRVVLSRFP
YPAFIYDVFILAIQNQLPLVLVLSFTYTSLNIVRAVVQEKERKLKEYMRMMGLSNWLHWS
AWFLMFFLFLSISVFFVTLLLCIQVSPNGAVLTYSDPTLVFVFLLLFTVATINFSFMISA
FFSRANVAAAAGGFIYFLSYLPYLFLWPRYDLLSHTQKVSACLISNVAMAMGAQLIGMFE
GKGTGIQWSNLFDSVTVDDDFSLAQVLSLLLFDSLLYGLVAWYMEAVFPGEYGVPLPSYF
FVLPSYWCSSPRMALVNEKEEEEDAEKALKGEFIEEEPGGLVSGIKIKHLVKDFKVGSKT
RKAVRDLTLNMFEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGRAYINGYDICQDMALIR
RSLGLCPQHDVLFDNLTVREHLLFYAQLKGYSKDKIPDEVDRIIRILNLEDKRQARSKTL
SGGMKRKLSIGIALIGDSKIVMLDEPTSGMDPSARRATWDLLQGEKRGRTILLTTHFMDE
ADLLGDRIAIMAGGELQCCGSPLFLKNKYGAGYHMVIVKDALCNVSEITRLVHMYVPNAT
LESSAGAELSYILPKESTSRFELLFAELEMNREELGIASYGASVTTMEEVFLRVGKLVDS
SLDIQAIQLPALQYQHERRSHDWTTDDTSSISGMTDVTDFTDSGTLISEDCSNIKLNTGV
RLHLQQFYAMFLKRALYSWRNWKVMVAQFLVPLVFTVVALVVARTFPNHQDAPQLRLALS
RYGPTRVPWALQPGAGPLTSALANAYSSQLSAQLGQLINVTDFTDYILTQAEEEGGSFNE
RCVVGAAFRGRSQYTEATAYFNNEGYHTPATALMMVDNALFKLLAGPNASIQTGNYPMPR
NLSEIAQSQLTEGKTGFAIAINLMYGMASLSSTFALLLVTESSIKSKHVQQVSGVYLSNF
WFSALLWDLVNFLLPCLLMLVVFQAFGVKAFVQDNHLVDVLLLLLLYGWAVVPLMYLLSF
FFSTAATAYTRLTIFNMISGTATFLAVTIMTIPELNLQDLSHLLDKVFLIFPNYCLGMSF
SQFYQNYEFISFCTSSSISQAVCKYLNITYQPNYFSMSEPGVGRFLVAFSVQGVVFIILL
FVIELQCVRTLWRLLTSLGRGRKQLPLIEDAALLPEDRDVAEERKRVLECQPIVESMVGS
PLILQELSKVYSSGANLLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDESVTSGD
AYIDGYSILRDIKKVQQRIGYCPQFDAILDHMTGRETLSMYARLRGIPERYVSGCVENVL
RSLLLEPHADKLVRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAVTR
TRESGKAIIITSHSMEECEALCTRLAVMVNGQIKCLGSPQHLKSKFGSGYTLLAKVHIET
ELEDSDLQLFKDFIESTFPGSQLKDEHQGMVHYHLTDKTLTWAQVFGTLEAAKEKYHIED
YCVSQISLEQVFLSFAQFQHCTDSWRK
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggctatcatgagacagtttggactactggtgtggaaaaactatctccagcagaaacgt
caaatcctggtaactctggtggagatactcctgcccttgctcttctccggtatcctcatt
gtactgcgtcagaaggtgccttttaaggactacccgaatgccacggtctatgagagctac
actgtcgataaactacccaagacgttcttgcaacacttacagctggcctatgtgcccggg
aactccagtgtggtgcgtcacgtggcagaggacgtgcgaggcagcctgttcctctcctca
gttcgtggctttgaaacagaagagcagtttgaggactacgtgagaaatgatgctctgtca
agaaagctgctggctgctgtggtgtttgagcaccctttcagccatgatgatgaatctctg
cccctaaaggtgagctaccacctgcgattctccttcaccccacgcaatgccccacccaag
gagaagtcggagctgaacccgaacagtgacctggactggcacacgctaagcctctatccc
ctttttcaactgccagggccgagagagcagtatgacaaggaggggggcacgccaggttat
ttccgagagggttttctggcggtgcagcatgcagtggaccgagccatcatgcgctcttac
aacagaactgctgctgcctctctgctgcgacagatcagagtggtcctgtcacggttccct
taccctgcctttatatatgacgtcttcatcctggccattcagaaccagctgcccctagta
ctagtgctcagcttcacttacacctccctcaacatagttcgagccgtggtacaggaaaag
gaaaggaagctcaaggagtacatgagaatgatgggcctcagcaactggctccactggagc
gcctggttcctcatgttcttcctcttcctctccatttcagttttttttgttactctgctg
ctttgtatccaagtgagccctaacggagcagtgctgacctacagtgacccaacgctggtc
tttgtcttcctgctcctcttcactgtggccaccatcaacttcagcttcatgatcagtgcc
ttcttctcacgagccaatgtggcggcagcagcgggcggcttcatttattttctgagctac
ctgccttatttgttcctgtggccacgctacgacttactgagccatacccagaaggtgtca
gcctgccttatctccaacgtggccatggccatgggtgctcagctcataggaatgtttgaa
ggcaaaggtacaggaatccagtggtctaacttgtttgactctgtgacggtggatgatgac
ttctccctggcccaggttttgagcttgctgctgtttgactctttgctttatgggctagta
gcctggtacatggaggcagtttttcctggggagtacggagtgcctctaccatcctacttc
tttgtactgccttcatactggtgcagcagccctcgcatggctttggtgaatgagaaggag
gaggaggaggatgcagaaaaggctctgaaaggagaatttattgaggaggagccaggtgga
ctagtctctgggatcaagattaaacaccttgttaaggacttcaaagtggggagcaagaca
cggaaagcagtgcgggatctcacgctgaacatgtttgaaggacagatcacggtgctgcta
ggacacaatggtgctgggaagaccacaacactgtccatgctgacaggtctttttcctccc
accagtggaagggcttatatcaatggttatgacatctgtcaggacatggctctgatccgc
cgaagtcttggactttgtcctcagcatgacgtactgtttgataaccttacagtcagagag
cacctgctcttctacgcacagttgaaaggctactccaaagacaagattccagacgaggtg
gaccgaatcatccgtatcctgaaccttgaggacaagcggcaggctcgttccaagactctc
tctggtggcatgaagagaaaactctctattggcattgccctcattggagactccaagatt
gtaatgttagatgagccaacatcgggaatggacccatcggctcgacgtgccacctgggac
cttctgcaaggggagaaacgtggtcgcaccattctgctcaccacacactttatggacgag
gctgacctactcggtgaccgcatcgccatcatggcaggaggagagctgcagtgctgtggg
tcaccgctcttccttaagaacaaatatggtgctggctaccacatggtgatagtaaaggac
gctctttgtaacgtgtcagagatcacgcgccttgtacatatgtatgttcctaatgccaca
ttggagagcagcgccggagccgagctctcttacattttgcccaaagaaagcaccagcagg
tttgagctgctatttgctgagctggagatgaacagagaggaactcggcattgccagctat
ggagcttctgtaaccactatggaagaggttttcctgagagtaggaaagttggtggattct
agtttggacatccaggctatccagctgcctgccctgcagtaccaacatgagagacggtcc
catgactggaccacagatgacaccagcagcatcagcggcatgaccgatgtcacagacttc
acagacagtggcacactcatctcagaggattgctccaacatcaaactgaacacgggggtc
cgactgcacctgcaacagttttatgccatgttcctgaagagggcgttgtacagctggaga
aactggaaggtgatggtggctcagttcctggttcctttggtcttcactgttgtggcctta
gttgtggcacgcacctttcccaatcaccaggatgctcctcagctgaggctcgcactcagt
cgctacggtcccaccagggtcccttgggctctgcagcctggggctggtcccctgacctct
gccctggcaaatgcatacagttcacagctctctgcacagctaggccaactcatcaatgtc
actgactttactgattacatcctgacccaggcagaggaagagggcggcagctttaacgag
cgctgtgtggtgggtgctgctttccgtggccgcagccagtatactgaagcaacagcctac
ttcaacaatgagggctaccatacacctgccacagctctcatgatggtggacaatgctctg
ttcaaacttctagcaggaccgaatgcttccatccagacgggcaattaccccatgccacgc
aacctgtctgagattgcccagagccagctcacagagggtaagaccggctttgccatcgcc
atcaacctgatgtacggtatggcctccctgtccagcacctttgccctgctgcttgttaca
gagtcctctattaagtccaagcatgtgcagcaggtcagcggcgtctacttgtcaaacttc
tggttttcagccctgctgtgggacctggtcaacttcctgctgccctgtctcctcatgttg
gtggtattccaggcgtttggagtcaaggcttttgtacaggataaccacctggtagatgtg
ttactgttactgctgctctatggctgggctgttgtgcctcttatgtacctactcagcttt
ttcttctccactgctgctactgcctacactcgcctcaccatcttcaacatgatctctggc
acggccacctttctggctgtcaccatcatgaccatcccagagttgaacttacaggacctg
tcgcacttactggataaggtgttcctgattttcccaaactactgccttggaatgtccttc
agccagttctaccagaactacgaattcatctcattttgtacctccagttctatcagccag
gcagtctgcaagtacctaaatatcacataccagccaaactacttctcaatgtcggagccc
ggtgtgggacgcttccttgtggccttttcagttcagggagtggtcttcattattctgctg
tttgtcatcgagctgcagtgtgtccgcactctctggcgactcctaacctccctgggtaga
ggacgcaaacagttacctctaatagaggatgcagcgctcctcccagaggacagagatgtg
gccgaagagaggaagagggtcctggagtgccagccgatagtagagtctatggtcgggagc
cccctcatactgcaggagctcagcaaggtgtatagcagcggggcaaatcttttggctgtg
gacaggctttctctagccgtgggaaaaggggagtgttttggcctcctgggcttcaatgga
gcagggaagaccacaacttttaagatgctgacaggtgatgagagtgttacctccggggac
gcttacattgatggatacagcatcttgagggacattaagaaggtgcagcagcgcattggt
tactgtcctcagtttgacgccatattggaccatatgacaggaagagaaactctgagtatg
tatgcccggctcagaggaataccagagaggtatgtgtctggctgcgtggagaatgtcctg
aggtcgctgctgctggagcctcatgcagataaactggtccgcagctacagtggtggtaac
aagcggaagctgagtgcaggcatggccctgattggtgggcctccggtcatcttcctggat
gaaccttcaactgggatggaccctgtggccagaaggctgctgtgggatgctgttacacgc
acacgggagtctggcaaggccataatcatcacttctcatagtatggaggagtgtgaggcc
ctgtgtaccaggctggcagtgatggtcaacggtcagatcaaatgcctcgggagtccccaa
cacctgaagagcaagtttggcagtggctacaccctgctggctaaagtgcacatagagacc
gagcttgaggacagcgacctgcagctatttaaagacttcattgaaagcacctttccagga
agtcaactaaaggatgaacaccagggaatggtgcattatcatttgactgacaaaacactg
acctgggcccaggtgtttggtactttggaggcagccaaggagaagtaccacattgaagac
tactgtgtgagccagatatcactggagcaggtgttcctcagctttgcccagttccagcac
tgcacagacagttggaggaaatag
DBGET
integrated database retrieval system
