Xiphias gladius (swordfish): 120788692
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Entry
120788692 CDS
T07311
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120788692
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120788692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_31
HTH_37
HTH_24
NOC3p
Motif
Other DBs
NCBI-GeneID:
120788692
NCBI-ProteinID:
XP_039980606
LinkDB
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Position
LG4:complement(20766103..20790612)
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AA seq
439 aa
AA seq
DB search
MSEFSEEPRFTIEQIDLLQRLRHTGMTKQEILHALDTLDRLDREHGDKFGRRTSSSSSSS
SSYGVGGVNSCTNNSASNTTTTSFNNNNTASATTTSSVSCNGNNSTINSGEGSAGNHSVA
ASSSTTSKISTATQTQFGSSGGLSPSPSNSYDTSPPPGPPPPSAILTSPVSLVALSQNGR
DSLAATPNGKLSPPRYPVNSAAAARAFGFEATEEDLDIDDKVEELMRRDSSMVKEEIKAF
LGNRRISQAVVAQVTGISQSRISHWLLQHGSDLSEQKKRAFYRWYTLEKTTPGATLNMRP
APLPLEEMEWRQTPPPLTTAPGTFRLRRGSRFTWRKECLAVMESYFNDNQYPDEAKREEI
ANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEATILESHGIDVQSPGG
HSNSDDIDGNDFSEQVESD
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagttcagtgaggagccgcgcttcactattgagcagatagatctgctacagcgg
ctgcgtcacaccggcatgaccaagcaggagatcctgcatgcacttgacactctggaccgg
ctggaccgggagcatggcgacaagtttggccgccgcacctcttcttcctcctcctcctct
tcctcctatggagtaggcggggtaaacagctgcaccaacaactctgcctctaatacaact
accacatcattcaacaataacaacactgcctcggcaaccaccacctcttccgtgtcatgc
aacggcaacaacagcaccatcaacagtggcgagggaagcgctggcaatcactctgtggct
gcttcctcttccacaacctccaaaatctctaccgccacacagacgcagtttggcagcagc
gggggactctcgccatctcctagcaacagctacgacacctctccgcctccaggaccgcca
ccaccctctgctatcttgacatcaccagtctccttggtggcgctgtcacagaatgggcgt
gatagcttagctgctacacccaatgggaagctgtctcctccacgatatccagtgaacagc
gcggctgcagcacgggcttttgggtttgaagctacagaagaagacctggacattgatgac
aaggtggaggaactgatgaggagggacagcagtatggtgaaagaggagatcaaagcattt
cttgggaacaggaggatctctcaggcagtagtggcacaagttactggcatcagccagagc
aggatctcccattggctactgcagcatggctctgacttgagtgagcagaagaagagggcc
ttctaccgctggtacacgctggagaaaaccacaccaggtgccacccttaacatgcggcca
gctccgttgcctctggaggagatggagtggaggcaaaccccaccccccctcaccactgct
cctggtaccttccggctgcgtcggggaagtcgcttcacttggaggaaagagtgcctggcc
gtgatggagagctacttcaatgacaaccagtacccagatgaggccaaacgggaagagatt
gcaaatgcctgcaatgctgttattcagaaaccagggaagaagctgtctgatctggagagg
gtcacctcccttaaagtttacaactggtttgcaaatcgtcgtaaagagatcaagagacgg
gctaacattgaagccacaatcttggagagtcatgggatagatgtccagagtcccggagga
cactccaacagcgatgacatcgatgggaatgacttctcagagcaggtagaaagtgattga
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