Xiphias gladius (swordfish): 120788763
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Entry
120788763 CDS
T07311
Symbol
prpf39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xgl03041
]
120788763 (prpf39)
Spliceosome [BR:
xgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120788763 (prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
TPR_19
TPR_10
TPR_12
HrpB1_HrpK
Motif
Other DBs
NCBI-GeneID:
120788763
NCBI-ProteinID:
XP_039980788
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All DBs
Position
LG4:complement(16899975..16909060)
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AA seq
787 aa
AA seq
DB search
MENTGLHLSDDTITGMLDTESPAMESNGDAFLPDLPVLGQATDWSLDQVAPEPLTNILPE
DSDASHDAGGQQQQPNQQMTSTELGSVEKAVEQFQLASAQLMLEEQPTEETEQPSEHKAD
SVDSQQQSQEMSVEPEAHVQDSSQDGTEAPQVMEDGMELEEPSKETTQESTVPTEPQLPS
DFEKLFKGCEENPEDFNGWVYLLQYVEQENVLTAVRKAFDVFFLRYPYCYGYWKKYADIE
KKHDNIQVAEEVYRRGLQAIPLSVDLWLHYLTYIKENSDPSDPETEGRIRAAYEHSVLAA
GTDFRSDRLWESFINWETEQQKLANVTAIFDRILGIPTQLYSQHFQRFKDHVQNNNPKHF
LSEEEFVQLRLELSKASLVAMVGNDEETPAAQEELPPGTEDLADPAKRVTEIENMRHKVI
EVRQEVFNHNEHEVSKRWAFEEGIKRPYFHVKALEKTQLNNWKEYLDFEIENGTPERVVV
LFERCLIACALYEEFWTKYAKYLESYSTDGVRHVYKKACTTHLPKKPAIHLLWAAFEEQQ
GNVEEARGILKSLDMAVPGLAMVRLRRVSLERRHGNLDEAEALLREAMESAKNATETSFY
AVKLARQLVKVQRSLSKARKVLLDAIEKDQMSPKLYLNLLELEYSGDVTQNEAEILACFD
RALKSPMPLESRLLFSQRKVEFLEDFGSDINVLVAAYEEQQKLQKESEPTKRKAENGYDS
SQEPDAKRQRVDDSSSGAANAMTDMQANNSAYNYNWYQQQYGGWGQNSWGQYNQYAQYNQ
YYPPPPT
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatactggcctgcacctctcagacgacaccattactggaatgctggacactgag
tcccctgccatggagagcaatggggatgcttttcttcctgaccttcctgttctaggccaa
gctactgactggtccctggaccaggttgctccagagccactcaccaacatcttgccagag
gactcagatgcgtcccacgatgctgggggccaacagcagcaaccgaaccagcagatgact
tctacagagctgggatctgtggagaaggcggtggagcagtttcagctggccagtgctcag
ctcatgctagaggaacagccgacagaagaaacagaacagccatcagaacataaagcagat
tctgtggactctcagcaacagagccaggagatgagtgtagagccagaggctcatgtacag
gatagcagtcaagatgggactgaggcaccacaggtgatggaggatggcatggagctggaa
gaaccatccaaagagacaacacaagaatcaactgttcccacagaaccacagctgcccagt
gattttgaaaaactctttaaaggctgtgaggagaacccagaggacttcaatggttgggtc
tacctacttcagtatgtggagcaagagaatgtccttacagctgtgagaaaggcatttgat
gtattcttcctgcgctatccctactgctatggctactggaagaagtatgccgatatagag
aaaaagcatgacaatatacaggttgcagaagaggtgtacagaagaggactgcaggccatc
cccctcagtgtggacctgtggctgcactacctgacttacatcaaagagaactcagaccct
agtgacccagagactgagggacgcattcgagctgcctatgaacattcagtgcttgcggca
ggcacagactttcgctcagaccgtctgtgggagtccttcatcaactgggagacagagcag
cagaagctggctaacgtcaccgccatctttgatcgcatcttgggcatcccaacccagcta
tattcccagcacttccagaggttcaaagatcatgtgcagaacaacaaccccaaacacttc
ttgtcagaggaggagtttgttcagctgaggctcgagctctctaaagccagcttagtggcg
atggtcggcaatgatgaagagacacctgctgctcaggaggagctaccacctggtacagag
gatcttgcggatcctgctaagagagtgacagagatcgagaacatgcgacacaaagtgatc
gaggttcggcaggaagtgttcaaccacaacgaacacgaagtcagcaagcgctgggccttt
gaggaagggattaagaggccatacttccatgtcaaagccttagagaagacccagctgaac
aactggaaggaatacctggacttcgagatcgaaaatggaactccggagcgcgtggttgtt
ctttttgaacgatgcctcatcgcttgtgctctctacgaggagttctggaccaagtatgca
aaatatctagagagctacagcactgacggtgtgagacatgtctacaagaaggcctgtacc
acccatctgcccaagaaaccagccatccacttgctgtgggcagcttttgaggagcagcaa
ggcaacgtagaggaggctcgtggcatcctgaagtccctggacatggcagtcccaggtctt
gccatggtacgccttcggagggtcagtctggagcgtcgccatggtaacttggatgaagca
gaggcgctgttaagggaggccatggagtctgcgaagaatgctactgagacatcgttctat
gctgtgaagctggcaaggcagctggtgaaggtgcagagaagtctgagcaaagccaggaag
gtgctgctggatgctattgaaaaagaccagatgagtccaaaactgtatctaaacctgctt
gagctggaatacagtggagatgtgacacagaacgaggcagagatcttggcttgtttcgac
cgagccctgaagagcccgatgccccttgaatcccgcctcctcttctcccagcgcaaggtc
gagttcctggaggactttggcagtgacatcaatgtgcttgtggcggcatatgaggaacag
cagaaactacagaaagaaagtgaacccacaaagaggaaagctgagaacgggtatgacagt
tctcaggaacctgatgcaaagagacagcgtgtggatgacagttcctcaggtgcagctaac
gcaatgacagacatgcaggcaaacaactctgcatataactacaactggtaccagcaacaa
tatggcggttggggacaaaactcctgggggcagtacaaccaatatgcccagtacaaccag
tactacccccctcctcctacatga
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