Xiphias gladius (swordfish): 120788896
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Entry
120788896 CDS
T07311
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120788896 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xgl01002
]
120788896 (capn3b)
Enzymes [BR:
xgl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
120788896 (capn3b)
Peptidases and inhibitors [BR:
xgl01002
]
Cysteine peptidases
Family C2: calpain family
120788896 (capn3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
DUF5363
Motif
Other DBs
NCBI-GeneID:
120788896
NCBI-ProteinID:
XP_039981080
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All DBs
Position
LG4:9446478..9463912
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AA seq
772 aa
AA seq
DB search
MGDNANKGKVPVVEDTKVKVLFDTEASLGADEKADYAPTGTNSIYSAILSRNETVKDAKR
LKTFLELRDKYVKKKVLFEDPLFPANDSSLFYSHRPMMKFEWKRPTEICGNPEFIIDGAN
RTDICQGELGDCWLLAAIACLTLNEKLLYRVIPPDQSFTENYAGIFHFQFWRYGEWIDVV
VDDRIPTCKNQLVFTKSFRKNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTE
FFELSEAQKDLYNIMRKALERGSLMGCSIDIISASEMETRTEQGLVKGHAYSIIGLEECY
LVAKDTRIRLIRLRNPWGWVLWKGPWSANSKEWSTISIADQENLKKQTVESSEFWMCFDD
FKRNFTKLEMCNMTPDTLQGDERKTWTVSVNEGRWVRGSSAGGCRNFPDTFWTNPQYRLQ
LYEEDDDPEDGQVACTVVVALMQKGRRMQRHRGARFLTIGFSIYEVPKEMCGQNQHLQKD
FFLYTASKAKCKTYINLREVTERFRLPPGEYIIIPTTFKPHEEGEFILRVFSEKQSTSEE
TENTIGSAGMQQDKKKKEKPIVFVSDRARANKEIEHDGIQGEKKKKPKHKLLKPEEETEE
EKQFYAIYQQIAGEDMQICANELKTVMKNVLAKHTEIKTDEGFSLETCRSMIALMDTDGT
GKLNLQEFKHLWRKIKEWQLIFKRYIKDNSCSISSFEMRNAVKDAGFHLNKQLYDIIAMR
YADEHLNIDFDSYICCFVRLEGMFRAFNAFDKDGDGVIKLNVLEWLQLTMYS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaatgcaaataaagggaaagtgcctgttgtggaagacacaaaggtgaaagtg
ctttttgacactgaagcatcactcggggctgatgaaaaagctgattacgctccaactggg
acaaactcaatctactctgcgattctgagcagaaatgagacggtcaaggatgccaagcgt
cttaagacctttttggaactgcgagacaaatacgtaaagaagaaggttttgtttgaagac
cctctgttccctgcaaatgactcttcgctcttctacagtcacagacctatgatgaagttt
gagtggaaacgtcccacggaaatttgtggaaaccccgagttcatcatagatggagccaac
aggacagacatctgtcaaggagaattgggtgactgctggctgctcgccgccattgcctgt
ctgacgctgaacgagaagttgctgtaccgagtgattcccccagatcagagcttcactgag
aactacgccggcatcttccatttccagttctggcgttatggcgaatggatcgatgtggtt
gtggacgaccgcattcccacctgcaaaaaccagctggtgttcaccaaatctttcagaaag
aacgagttctggagcgcccttctggaaaaagcttatgcaaagttgcacgggtcttatgag
gcactgaaaggggggaacacactggaagccatggaggatttcacagggggagttaccgag
ttcttcgagttgtccgaggcgcagaaagacctctacaacatcatgaggaaggcgctggag
agaggctcgctgatgggctgctccatagatattatttcagccagtgaaatggagacgagg
accgagcaggggctggtcaaaggccatgcctactccatcataggcctggaggagtgttat
ttggttgcaaaggacaccagaattcgcctgattcgcttgcgcaacccctggggttgggtg
ctgtggaagggaccgtggagtgcaaattcaaaggaatggtcgaccatttccatcgcagac
caggagaacctaaaaaaacagactgtggagtcgagtgagttctggatgtgttttgatgat
ttcaagaggaacttcactaagctggagatgtgtaacatgacccctgacacactgcagggt
gacgaaagaaagacctggacggtgtcggttaatgagggtcgctgggtgagaggcagctct
gctggcggctgcaggaacttcccagacacattttggacgaaccctcagtatcggctgcag
ctgtatgaggaggatgacgacccagaggacggacaagtggcctgcaccgtggtcgtagct
ctgatgcagaaagggcggaggatgcagcgccatcgaggggccagattcctcaccatcggg
ttttccatctacgaggtaccaaaggagatgtgtggacagaatcaacacctgcagaaggac
ttcttcctgtacacagcctccaaagctaaatgcaagacctacattaacctgcgagaggta
acagagcgtttccgtctgccgccgggagagtacatcatcatccccacgacctttaaaccc
cacgaagagggagagtttatcctccgggtcttctctgagaagcagagcacctccgaggaa
acggagaacacaattggctctgccggaatgcagcaagacaagaaaaagaaagaaaagcct
attgtatttgtgtcagacagagcgcgtgccaacaaagaaatcgagcatgacggcattcag
ggggaaaagaagaagaaaccgaagcataagctgttaaaacctgaggaagagactgaggag
gaaaagcagttctatgccatttaccaacagattgctggtgaggacatgcagatctgtgcc
aatgaactcaaaacggtcatgaagaacgtactcgccaaacatactgaaataaagaccgac
gaaggcttcagccttgagacgtgtcggagtatgatcgccttgatggatactgatgggaca
ggaaagctgaacctgcaggagttcaagcacttgtggagaaagatcaaggagtggcagctg
atcttcaagcgttacattaaagacaattcgtgctccatcagtagttttgagatgaggaac
gctgttaaagatgcagggtttcacctcaacaaacagttatacgacatcatagcaatgcgc
tacgcggacgaacacctcaacatcgacttcgacagttacatctgctgtttcgtgaggcta
gagggcatgttcagggctttcaatgcctttgacaaagacggagatggagtaatcaaactc
aacgtcctggagtggcttcagctgaccatgtactcttag
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