Xiphias gladius (swordfish): 120788913
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Entry
120788913 CDS
T07311
Symbol
brf1b
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit b isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgl03021
]
120788913 (brf1b)
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
120788913 (brf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
120788913
NCBI-ProteinID:
XP_039981113
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All DBs
Position
LG4:107316..139272
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AA seq
743 aa
AA seq
DB search
MSSRVCRTCGGADIDVDQARGSAVCTGCGSVLEDNIIVSEVQFVEGSGGVSSAVGQFVSA
DGPVKAPLLGSGFHTTVGKESRAQTLQSGKRQIQQLGSQLQLNQHCLDTAFNFFKMVVSK
HLTRGRKTEHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINAPA
IDPCLYIPRFAHMLEFGAKTHEVSMTALRLVQRMKRDWMHTGRRPSGLCGAGTTLLLPRQ
QQKSTTEQDCLHQTNNMLSPTLPPTALLVAARMHKFRRTVKDVISVVKVCQTTLRKRLTE
FEDTPTSQLTIDEFMRVDLEQECDPPSFTAAQHKAKMQQLEQELARKLDEVEGEISCYKD
EIETELEKSRPKLRGIYAAYAKEIDPEDVDGLSSTSEPEEPEVEDAELQATTQHLTQDFL
CQVIQEEDVRGKKTDDSKQEEETEKEVAGPQRLLAPLAVILGKLPSTPGLNLQQTFQTFN
KSETGRKPDDDESESGELDLDGIDDQEIDKYILNDKEVQVKTELWMKQNAEYLKEQKEKE
ERIKKEKEQGTYKEKKKKKCKKREQIEALTAGEAIEKMLEKKKISSKINYDVLRDLNSRG
TGSGGGSSPSKASSDPPNSNTATRKRLSRHRRRRKTSDANQDLAANASIMGKRFRRLIST
KKKKTASQVENSVTMTTQITTETASEPTPDPELDTSSTPTAPPPTVVEEEEEEEEEVEVE
EECVSALQLVGDYGCEVEEEEVF
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagggtgtgcaggacctgtgggggagcggatatagatgtggatcaggctcgg
ggcagcgcagtgtgtaccggttgtggttcggttctggaggacaacatcatcgtctctgag
gttcagtttgtggaaggaagtggaggagtttcatctgctgtgggacagtttgtctctgct
gatggtccagttaaagctcctcttcttggttctggtttccacaccactgttggtaaagag
tccagagcccagaccctgcagagcggtaagcgtcagatccagcagctgggtagtcagctg
cagctgaaccagcactgtttagacacggccttcaacttcttcaagatggttgtcagtaaa
cacctgacccgcggacgcaagacagagcacgtcatcgcagcgtgtctctacctggtgtgt
cgcaccgaggggacgccacacatgctgctggacctgagtgacctgctgcaggtgaacgtt
tacatcctgggaaagacgttcctgctgttggctcgtgagctctgcatcaacgctcctgcc
attgacccctgtctctacatccctcggtttgctcacatgttggagttcggggctaagact
catgaggtttccatgacggctcttcgtctggttcagcggatgaagagggactggatgcac
actggacgccgaccgtccggcctctgtggagcaggtacaacattgctattaccacggcaa
cagcaaaaatcaacaacagaacaagattgtttacatcagacaaataatatgttatccccc
accctcccacccacagctctcctggtagcagctcggatgcataagtttcgtcgtacagtg
aaggatgtgatcagtgtggtgaaggtctgtcagaccactctgagaaagaggttaacagag
tttgaggacacgcccaccagtcagcttaccatcgatgagttcatgagagtagatctggag
caggaatgtgatccaccctccttcaccgctgcacagcacaaggccaagatgcagcagctg
gaacaggagctggctaggaagttggacgaggttgaaggagagatcagctgctacaaagac
gagattgagaccgagctggagaaaagccgacccaaactgagaggaatctatgctgcctac
gccaaagaaatcgaccccgaggatgtggacggtttgtcctcgacctctgaacccgaagag
ccagaagtcgaagacgctgagctccaagccaccacccagcacctgacccaggacttcctg
tgtcaggtgatccaggaggaggatgtgcggggcaagaagacggatgacagcaagcaagag
gaggagacagagaaagaggtggctgggcctcaacgtctgcttgcccctctggccgtcatc
ctggggaagcttccaagcacccctggcctgaacctccaacagaccttccagacctttaac
aagtcagagacaggccggaaacctgacgatgatgagtcggagagtggtgagctggacctg
gatggcattgatgatcaggagattgataaatacatcctgaatgataaggaggttcaggtg
aagacggagctgtggatgaaacagaatgcagagtacctgaaagagcaaaaagaaaaagaa
gagaggataaagaaagaaaaagaacaggggacgtataaagagaagaagaagaagaagtgt
aagaagagggagcagattgaggcattgacagcgggtgaggcgatcgaaaagatgttggag
aagaagaagatctccagtaagatcaactatgacgtcctcagagacctgaacagcagaggg
actgggagtggggggggcagcagtcccagcaaagcctcctccgacccccccaacagcaac
accgccacacggaaacgactcagccgccaccgccgccgtaggaagaccagtgatgctaac
caagatcttgcggctaatgctagcatcatggggaagaggttccgtcgcctcatctccaca
aaaaagaagaaaactgcctctcaggtagaaaactctgtcaccatgacaacacaaataaca
acagagactgcatctgaaccgactcctgaccctgaactagacacaagctccacccccaca
gctcctcctcccactgtggtggaggaggaagaggaggaggaagaggaggtggaggtggaa
gaggagtgtgtcagcgctctacagctcgtaggagattatggctgtgaggtggaggaggag
gaagtcttctag
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