Xiphias gladius (swordfish): 120788925
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Entry
120788925 CDS
T07311
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120788925
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
120788925
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
120788925
NCBI-ProteinID:
XP_039981139
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Position
LG4:complement(24850073..24863057)
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AA seq
611 aa
AA seq
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MSQNKEAQRIPQTDSPEKTEERKHTHSESASTMDHQQQHAKVERFLKLGYSQSDILRVLE
SLHHDAQTNDILEELIKTCHTRTYNNKSVPNSPKLVPRGCSPTRSQPRPGPDREPAAGFR
PVVIDGSNVAMSYGDKKVFSCQGLQLAVNWFWDKGLRDITVFVPLWRKEQPRPDAPITDQ
HILHELERRKILVYTPSRCVNGKRVVCYDDRYIVKLAFNSDGIIVSNDNYRDLQTENPGW
KKFIEERLLMYTFANDKFMPPDDPLGRNGPTIDDFLRKKPWTPDNKLQHCPYGKKCTYGV
KCKFYHPERANQSQLSVADELRALRDRAKNFSPKLSLQDSHSCPTLYQPEHRYTSSTPPP
PSVEDQSHRASPSEQFVYQRDSSSPRSQPNASLHHCPSPDLDEAFSSMESSMSRLYIQDM
PYSMEHPPHSYSSGVASYSLSHDDYSLSGSYSGNTRRPCQSGGGYCPHRNCSGSRKRPVC
SQCRCDHQQTRMPPHHRHHHHQAWNSCPALPPHNVEYHSHVSEEQFFSQPANRQTHSSHG
DPWPRGGLSDTRLNGRAKSPFSEQRKALRSQLSTLFPQSTVEQVMNAYPDVSDMSELISL
IQSYRTSHISF
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaataaggaggcgcagaggattccccagacagacagtcctgagaagacggag
gagaggaaacacacgcattctgaatcagcatccacaatggaccaccagcagcagcacgcc
aaagtggagcgattcctcaagttggggtactctcaaagcgacatcctcagggtgctggag
agcctccaccatgacgcccagaccaatgacatcctggaggagctgataaagacctgccac
actcgtacttacaacaacaaaagtgtcccaaacagtcccaagctggtgcccagaggctgc
agccccacacgcagtcaacccagacccggaccagacagagagccagctgctggcttcaga
ccagtggttatagatggaagcaatgtggccatgagctatggcgacaagaaggtgttctcg
tgccagggcctccagctggcagtgaactggttctgggacaaagggctgcgcgacatcact
gtgttcgtacccctgtggaggaaggaacagccgcgaccggacgcaccgatcacagatcaa
cacattctccacgagctggagagaaggaagatcctggtgtacacaccgtctcgctgcgta
aatggtaagagggtggtgtgctacgacgaccggtacatcgtcaagctggccttcaactca
gacggcattatcgtgtccaacgacaactaccgcgaccttcagacggagaatcccggctgg
aagaagttcatagaagagaggctgctgatgtacacctttgccaatgacaagttcatgcct
ccagatgatcctctgggcagaaatggacccacaattgatgattttctgaggaagaagccc
tggaccccagacaacaagctgcagcactgtccctacggaaagaagtgtacttatggagtg
aagtgcaagttctaccacccagagcgggccaaccaatcacagctgtctgtggctgatgag
ctgagggcgctgcgagacagagccaagaacttctcgcccaaactgagcctgcaggactca
cactcctgccctactttgtaccagccggagcacagatacacctcatccacccctccgccc
ccgagcgtagaggaccagtcacacagggcttcgcccagtgagcagttcgtctatcagcgc
gactccagcagcccgagaagccagcccaacgcgagtctccaccactgtccaagcccagac
ctggacgaggccttcagctccatggagagctccatgtccaggctctacatccaagatatg
ccctatagcatggagcaccctccccacagctacagcagtggggtggcgagctacagcctg
agccatgacgactactccctctcagggtcatacagcgggaacacccggaggccctgtcag
agcggaggaggttactgccctcaccgaaactgctcggggtcccgcaagcgccccgtgtgc
agccagtgcaggtgtgatcaccagcagaccaggatgcccccccaccaccgccaccaccac
caccaagcatggaactcctgcccagctctgcctccacataacgtggagtatcacagccac
gtttcagaggagcagttcttcagccagcctgccaacagacagacccacagctcgcacggg
gacccgtggcctcggggcggcctctctgacaccaggctgaacggccgggccaagagcccg
ttcagcgagcagaggaaggccctgaggagccagctgagcaccctcttcccccagagcaca
gtggagcaagtcatgaatgcttacccagacgtctcagacatgtccgaactgatttctctc
atccagagctacaggaccagccacatctccttctaa
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