Xiphias gladius (swordfish): 120789086
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Entry
120789086 CDS
T07311
Symbol
bbs4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein isoform X1
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xgl03036
]
120789086 (bbs4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xgl03037
]
120789086 (bbs4)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
120789086 (bbs4)
Cilium and associated proteins [BR:
xgl03037
]
Primary cilia and associated proteins
BBSome
120789086 (bbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_11
TPR_19
TPR_14
TPR_16
TPR_12
ANAPC3
TPR_17
TPR_CcmH_CycH
TPR_9
TPR_6
TPR_7
ARM_TT21_2nd
ARM_TT21_4th
TPR_15
ARM_TT21_N
NatA_aux_su
ARM_TT21_C
PknG_TPR
TPR_20
Coatomer_E
ChAPs
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
120789086
NCBI-ProteinID:
XP_039981551
LinkDB
All DBs
Position
LG1:28168136..28180927
Genome browser
AA seq
545 aa
AA seq
DB search
MATASSVDHPKMADQGASTALPVSTEAKKRRAPKAPELPIVERRNWLIHQHYIRKDYDTC
KVIIKEQLQETNGMCEYAIYVQALILRLEGKIQQSLELFQSCAVLNPSSADNLKQVARSL
FLLGKHKAAIEFYHEAARLNEKDWEISHNLGVCYFFIKDFKNAEEHLNLALQINKHDKTF
TMLGKVHLLAGESDKAIEVYKRAVEYSPENTELLTTLGLLFLQLGKYQKAFEHLGNALTF
DPNNYKAILAAGSMMQTHGDFDVAMNKYRVAACAVPESPPLWNNIGMCFFGKKKYVAAIS
CLKRAHYLSPFDWKVLYNLGLVHLTMQQYASAFHFLSAAINLNPRMGELYMLLAVALTNL
EDVENATRAYEQAVTLDESNPLVNLNFSIFLYNHGDKKGALDQYQEMERKVNLLRDSCIN
FEFDPELMDMAQKMGAALQVAESLVWTKPGKDSKSKPNSAATAKTPGAPLGTNQALGQAM
SSAASYNKNIQLPTGVSKGPSMPLEPEPDVEKAPSPPTDPPGSPEPAESDNPKPRTSKRK
TKVEE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcttctagtgttgatcatcccaagatggcggaccaaggggcatccacggcg
ctcccagtttctactgaagccaagaaacgccgggcacctaaagctccagagcttcccatt
gtggagaggagaaactggctcatccaccagcactatatccgcaaagactatgatacctgt
aaggtgatcatcaaagaacaactgcaggagactaatggaatgtgtgaatatgcaatatat
gtgcaagcattaatcttgcgtcttgagggcaagatccagcagtccctggagctgtttcag
agctgtgccgtccttaatcccagcagtgctgacaatctcaagcaagtggccagatcccta
tttctcctggggaagcacaaagcagccattgaattctatcatgaagctgcaaggctcaat
gagaaggactgggagatcagtcataatctgggtgtgtgctatttcttcatcaaagacttc
aaaaatgctgaagagcatctaaacttagctctccagataaataaacatgacaagactttc
acgatgcttgggaaagttcatttgctggctggagagtctgacaaggccattgaagtgtat
aagcgagcagtagaatactccccagagaatactgaactcctgactactcttggcctgctg
tttttacagcttgggaaataccaaaaagcttttgagcacctcggaaatgccctcactttt
gaccccaacaattataaggccatcctggctgcaggcagcatgatgcagacccatggtgac
tttgatgtggccatgaacaagtaccgagtggcagcatgtgctgtgcccgagagcccccct
ctctggaacaacatcggcatgtgcttctttgggaaaaagaaatacgtagctgccatcagc
tgcctgaagcgggcccactacttgtctccttttgactggaaagtgttgtacaacctgggt
ctggtacacctgaccatgcagcagtacgcttcggccttccacttcctcagtgcagccatc
aacctgaacccacgaatgggggagctctacatgttgctggcagtggctctgaccaacttg
gaggatgtcgagaatgccaccagagcttatgaacaagctgtgactctggatgaatccaac
cctctggttaacctgaacttttcgatattcctctataatcatggcgacaagaagggagct
ctggatcagtatcaggagatggaaaggaaagtcaacctgcttcgagacagctgtatcaac
tttgaatttgatcctgagctgatggacatggctcagaagatgggagctgccctgcaggtg
gcagagagtctggtgtggaccaaaccaggcaaggactcaaaatcaaaaccaaactcagca
gcaaccgccaaaacccctggtgctcccctcggtactaaccaagccctgggtcaggccatg
tcttctgctgcaagctacaacaagaacatccagctgccgacaggagtctctaaaggcccc
tccatgccccttgagccagaacctgacgtggagaaagcccccagcccgcccactgatcct
ccaggctccccagaaccggcagagtcagacaaccccaaacccagaacctccaagaggaaa
actaaggtggaggaatga
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