KEGG   Xiphias gladius (swordfish): 120789236
Entry
120789236         CDS       T07311                                 
Name
(RefSeq) PH-interacting protein
  KO
K11797  PH-interacting protein
Organism
xgl  Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xgl04121]
    120789236
Ubiquitin system [BR:xgl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     120789236
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Bromodomain WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_SCAP NBCH_WD40 Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_IFT122_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_HPS5 McrBC Auxin_resp
Other DBs
NCBI-GeneID: 120789236
NCBI-ProteinID: XP_039981758
LinkDB
Position
LG4:18238179..18269359
AA seq 1838 aa
MASDSTHIAQLTSELYFLIARFLEAGPCQKAAETLIREVEEKELLPKRLDWTGEEHPGTY
ENLVKLYRHISPDHLLQVCSRVCPLLEREVPASVPGLTSLLGAGRQNLLRTSKSCKNVVW
KGSALAALHCGRPPEPPIIYGSPPNIVDTSYGRRLNGSYRLRQLVPTAVYQHMKMHKRIL
GHLSSVYCVTFDRTGRRIFTGSDDCLVKIWGTDDGRLLATLRGHAAEISDMAVSYENTMI
AAGSCDKTIRVWCLQTCAPLAVLEGHAASITSLQFSPLCSGSKRYLSSTGADGTICFWQW
DARTLKFGQRPSKFTERSRPGVQMICSSFSAGGMFLATGSTDHIIRVYYFGSGQPEKISE
LESHTDKVDSIQFSHCSDRFVSGSRDGTARIWQLQPQGWRSILLDMQTKLPGKYNPPPLE
DKVTKLKVTMVAWDRHDSTVITAANNLTLKVWNSTTGNLVHVLMGHEDEVFVLEPHPFDP
RILFSAGHDGNCIVWDLARGIKIRSYFNMIEGQGHGALFDCKCSPDGQHFAATDSHGHLL
IFGFGSSSKYDKIADQMFFHTDYRPLIRDANNYVLDEQTQQAPHLMPPPFLVDVDGNPHP
PRYQRLVPGREGCRDEQLIPQMGVTSSGLNQVVSEQALDGPSPLDTMIQRLQQEQDQRLG
TNDASASAAANSRASRGSVGSPTEVHSPPNVGLRRSGQIEGVRQMHSNAPRSQMATEGDL
VAWSRRVLVPELEDASVRRQVNWREAKGEEEINIYQSERRRRTIHSLPKESRVHPTSECV
VDEGRRSQGNHGYHTRAAMEETSRQSAEAADDDDSTSEGEVEVRQINGHSSEEEKDEEEK
EPWPDDHSSSSDYSSDYSDWTADAGINLEPPKKSVKVKKKSSSSEEDGEKKRDGKKERKK
DKPDKDGALPKKKKPKEKRKRTELQDQGLTLEEWLPSAWITDTVPRRCPYIPQMGDEVYY
FRQGHEAYVEMAKQKKIYSINPKKQPWHKMELREQELMKIVGIKYEVGLPTLCCLKLSFL
DPDTGKLTGGSFSMKYHDMPDVIDFLVLRQQFDNARKRQWSIGDRFRSVIDDAWWFGTIE
SQEPYQPQYPDSLFQCYNVCWDNGDTEKMSPWDMEPIPDDATFPDELGMSVPLTEEEQKE
LLYVPLDGEWGCRTRAEECERIIKAIDQLCTLDVAAPFAFPVDLQAYPTYCTVVAYVTDL
STIRQRLVNHFYRRLSSLMWEVRYIEHNAQTFNEPGSFIVTTAKFVSDLMLQFIKDQSLT
DLMPLYKTMKKATFSDSEDEDEEEDDEDSNTPGTSTRNHKGRRPMQRQLRTRPPSYDPHA
WRGRCKELLDLIFQCEDSEPFREPVDLQEYPDYLQIVDSPMDFGTVLNTLTDGKYQSPIE
LCKDVRLIFSNSKAYTPSKKSRIYSMSLRLSALFEEHVSSILADYKAIHGLTDKLTKQGT
DRQTRLTTDRQTRHAMKRRRRRSESPTSSTASSPERKRRVSSRMTAKREPSPAPSRTSSL
RHPIPLKQPPQQFNGKADTPAAGRTRSTARHSAHSPPASSSSHNATSNTTSTAESTRSLR
AHNSVSASTPPAPEKVTPFPAAESSSGGSTRRKLRTPVRHAPGSPASPSSQSTVHLNGHS
SHMTLGVGRRGRKSRIDPPVSPPEVTTPASPSRPRGRPPGKKRGRKSKQELEEMRRSSNR
RSSTPDDELDQSTGDEGGTSSAQETSVLSDSGMASTPRRRGRPRVVRTDESTPPAESPEP
SPLRRSGRRTNEEVTPPLQTAPPRSNRKESPKEEAGEGAGGSMRTRNQGRRSAWYMEEDS
EEEQRQLLFEDSSITFGTSSKGRVRKLTEKAKANLIGW
NT seq 5517 nt   +upstreamnt  +downstreamnt
atggcttcagacagtacacacatcgcgcagttgacttctgaactgtacttcctaatagcc
cgatttctagaagctggaccgtgtcaaaaagcagccgagactctgataagggaggtggag
gagaaggagctgctacccaaaaggctggactggacaggggaggaacaccccgggacgtac
gaaaatttggtgaagctctaccggcacatcagtccagaccacctgctgcaggtctgctcc
agagtttgtccattgctggaaagggaggtccctgccagtgtgcctggactcaccagcctg
ctgggagctggcaggcagaatctcctccgcaccagcaagagttgcaagaatgttgtgtgg
aagggttcagcactggctgcacttcactgtggaagaccaccagagccgccaattatctat
gggagcccacctaatattgtggatacgagctatggccgtcgactgaatggttcctaccgt
ctccggcaactggtgcccactgctgtgtaccagcacatgaagatgcacaaaaggatccta
ggacacctgtcgtccgtgtactgtgtcaccttcgacaggacaggacgacgcatcttcacg
ggctcagacgactgccttgtgaagatctggggaacagatgacggacgtctgctggcgaca
ctgcgtggtcatgctgctgagatctccgacatggccgtcagctacgagaacaccatgatt
gctgctggttcctgtgacaagaccatcagagtgtggtgcttacagacctgcgcccctttg
gccgtcttggagggacatgcagcgtctatcacctcactacagttttctcctctctgtagt
ggttccaagcgctacctgtcctccaccggagctgacggaaccatctgcttctggcagtgg
gatgcacgcacgctcaagtttggtcagaggccaagtaaattcacagagcgttccagacct
ggcgtccagatgatctgctcctccttcagcgcaggtggtatgttcctcgccacaggaagc
accgaccatatcatcagggtgtattactttggttcaggccaaccagagaagatctctgaa
cttgagtcccatacagacaaagtcgacagcatccaattttcacattgcagtgacaggttt
gttagcggcagcagggatggtacagcacgaatctggcagctgcagcctcagggctggaga
agcattctgctggacatgcagaccaaattacccgggaagtacaaccctcctccactggaa
gataaggtgaccaagctgaaggttaccatggtagcgtgggatcgccatgacagcacggtg
atcacagcagccaacaatctgacactgaaggtgtggaactccaccaccgggaacctcgtc
catgtcctgatgggtcacgaggatgaggtgttcgttctggagccacacccttttgatcca
agaatccttttctcagcggggcatgatgggaattgcattgtgtgggacctggcaagaggg
atcaagattcgctcttattttaacatgattgagggccaagggcatggggcgttgtttgac
tgcaaatgtagtccagatgggcagcattttgcagccacagactcccatggacacctgctc
atctttggctttggctccagcagcaagtatgacaagatagcggaccagatgttcttccat
accgactatcggccactcattcgggacgccaacaattacgtgctggacgagcagactcag
caggcaccacacctaatgcccccgcccttcctggtggacgtggatggaaacccccaccct
cctagataccagcggttggtgcctggaagggagggctgcagggatgagcagctgatccca
cagatgggagtcacttcctcaggcctgaaccaagtggtgagtgagcaggcgttggatggt
cccagtcctctggatacaatgattcagaggctgcagcaggaacaagaccaaagactggga
acaaatgatgcctctgcttctgctgctgcaaactctagggccagtagaggatcggttggt
tcgcccacagaggtgcactccccaccaaacgtgggtctgcgtcgcagcggccagattgag
ggtgtccgccaaatgcacagcaatgccccacgcagccagatggccacagagggagacctg
gtagcctggagccgcagggtgctggtccctgagctcgaggacgcctctgtcaggagacag
gtgaactggcgtgaagctaaaggggaggaggaaatcaatatttatcagtcagaaaggagg
agacgtacaatccactctctccccaaggagagcagggttcatcccacatcagagtgtgta
gttgatgaggggaggaggagccagggtaaccatggttatcacactcgtgctgccatggag
gagacgagtcgccagagtgctgaggctgcagacgacgatgacagcacctcagagggagag
gtggaggtacgacaaatcaatggacattcctcagaggaggagaaggatgaggaggaaaaa
gagccctggccagatgaccacagtagttcaagtgactactccagcgattactctgactgg
acagcggatgcagggatcaaccttgaaccgcccaagaagagtgttaaagtaaaaaagaag
agcagcagctctgaggaggacggagagaagaagagagatgggaagaaagaaagaaaaaaa
gacaaaccagacaaagatggtgcattaccaaagaaaaagaagccaaaggagaagaggaag
aggacagagcttcaggatcaagggctaactctggaggagtggcttccctctgcttggatc
acagacacggtcccccggagatgtccttacataccccagatgggagacgaggtatactac
ttcagacagggccacgaagcctatgtggagatggccaaacagaaaaagatttacagcatc
aatcctaagaagcagccctggcacaagatggagctacgggagcaggagttgatgaagata
gttggcatcaagtacgaggtcggcttgcccacactgtgctgtctgaaactgtccttcctg
gaccctgacaccggcaaactgaccggaggatccttctctatgaaataccacgacatgcct
gatgttatcgacttcctggtgttgcgtcagcagtttgacaatgccagaaagaggcagtgg
agtataggtgacaggtttcggtcagtgattgatgatgcctggtggtttgggaccattgag
agccaggagccctaccagccccagtatcctgacagcctgttccagtgctacaatgtctgc
tgggataatggagacacggagaagatgagtccttgggatatggagccaatccctgatgat
gccacattccctgacgagttaggcatgagtgtcccactgacagaagaagagcagaaggag
ctgctgtatgtccctctggacggggaatggggctgccgcacacgcgcagaggagtgtgaa
cgcatcatcaaagccattgaccagctctgcacacttgatgtggcagcgccatttgccttt
ccagtggacctacaggcttaccccacgtactgcacagtagtggcctacgtcactgacctc
agcactatacgccaaaggctggtgaaccacttttacagacgactgtcctctctgatgtgg
gaggttcgttatattgaacacaacgcccaaacattcaatgagccaggatcattcattgtc
actactgccaagtttgtctctgacctcatgctgcagtttattaaggaccaaagtctgaca
gacctcatgcccctctacaaaactatgaagaaggcaaccttctctgactctgaagatgag
gatgaggaggaggacgacgaagatagtaatactcctggaacatccacacgaaaccataag
ggtcgtcgacctatgcagcgccaactgcgaactcgacctccttcatatgaccctcatgca
tggaggggacgctgtaaggagctgctggacctgatctttcagtgtgaagattcagagccc
ttcagagaacccgtggacctacaggagtacccggactacctgcaaatagttgactctcca
atggacttcggtaccgttctcaacacgctaacagacggaaagtaccagtctcccattgag
ctctgcaaagatgtccggctcattttcagcaattccaaagcttatacgcccagtaagaag
tctcggatctacagtatgagtctgaggctttctgcactgtttgaggagcatgtcagctcc
atcctggccgactacaaggccatccacggcctgacagataaactgaccaaacagggcaca
gacagacagacacgactcactacggacagacagacacggcacgccatgaagaggaggagg
aggaggagcgagtctcccacaagcagcactgcatccagcccagagaggaagagacgtgta
tcatccaggatgaccgcaaaaagggagccatcaccagctccttcacgaacttcctccctg
agacatcccatcccactcaaacagcccccccagcagttcaatgggaaggcggatacaccg
gctgcagggcgaacacgaagtacagcacgccattctgcacactctccacctgcctcatcc
tcctcacataatgccacaagcaacacaacgagcacagcagagtctactcgttcgctgagg
gctcataactctgtgtcagcttcaacgccaccagctcccgaaaaggtgacaccatttcca
gctgcagaaagtagcagtggaggaagcacccggcggaaactcaggactcctgtacgacac
gcacctggatctcctgctagcccctcatctcagagcacagtccacctgaatggtcatagc
agtcatatgaccctgggtgtggggaggagggggcggaaatccagaattgacccaccggtg
agtcctccagaagtcacgactccggcgagtccttccagaccccgaggccgccctcctggc
aagaagagaggcaggaagagcaaacaggaactggaggagatgagaaggagcagtaaccgt
aggagttccacgcctgacgatgagcttgaccaatccacaggcgacgaaggtgggacgtct
tctgcacaggaaacatctgtgttgtcagactctggcatggcgtcgacgcctagacggcgt
ggcaggcctcgagtggtaagaactgatgaatccactcctccagctgagtcacctgagccc
tcgccgctgaggaggagcggcaggagaaccaacgaggaggtcacccctcctctgcagact
gctcctccacgatccaatcgcaaggagtctccaaaggaggaagcaggggagggggcagga
gggtccatgcgcacacgtaaccaggggcgacggtcggcctggtacatggaggaggactct
gaggaggagcagaggcagctgctgtttgaggactcatcaatcacctttggcacctcttct
aagggacgtgtccgtaagctgacagaaaaggccaaagccaaccttataggctggtaa

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