Xiphias gladius (swordfish): 120789241
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Entry
120789241 CDS
T07311
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03040
Spliceosome
xgl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120789241 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xgl03041
]
120789241 (srsf5b)
Spliceosome [BR:
xgl03041
]
Common components
Common spliceosomal components
SR proteins
120789241 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
120789241
NCBI-ProteinID:
XP_039981764
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All DBs
Position
LG4:7188091..7194439
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AA seq
295 aa
AA seq
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MSGCRIFIGRLSPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGSSGGGRFSDRYGRGSQNSRSRNPPPMRTENRLIVEN
LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNALEKLSGKEINGRKI
KLIEAAKKRSRSRSRSESSSRSRSRSRGRSPSRSPRRSRSPAKAHNRSRSRSGSPAGSPS
SPGSKSKEPAKRSSKTSKSATPPSPPPAQRASVSRSRSRSRSRSRSRSRSTDSQR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatgtcgtattttcatcggccggctgagcccctcggccagggagaaggacgtg
gagaggttcttcaaaggatacggccgcatccgagatatcgacctcaagaggggctttggg
ttcgtggagtttgacgaccccagagatgctgaagacgcagtgtatgagcttgatggcaaa
gagctgtgcaatgaaagggtgaccattgagcacgcccgtgttcgtctgcggggcggccgt
ggcagaggtggcagcagtggaggaggacgtttctctgatcgctacggccgaggctcccag
aacagtcgaagtcgaaaccctcctccgatgcgcactgagaaccgcctgatcgtggagaat
ttgtcgtctcgtgtcagctggcaggacctgaaagatttcatgagacaagctggagaggtg
acattcgcagatgcacatcgccccaagctcaacgaaggggttgtagagtttgcctcttac
agcgacctgaaaaatgcccttgagaaactgtctggaaaggaaatcaatggcaggaaaatc
aagctcatagaggcagccaagaagaggtcgagaagtcgttcccggtctgaaagctcctcg
cgctcgcggtctcgttctcgtggtcgctctccatcacgctccccccgacgctcacgcagc
cccgccaaggcccacaaccgctcccgctcccgcagtggctctcctgccggaagcccttca
tccccgggctccaaatcaaaagagcccgccaaacgctcctccaagacgagcaagtccgcc
accccgccctcccctccgcctgcccagagagcctccgtctcccgctcccgctctcgctcg
cgctcccgctcccgctcccgttctcgttctactgacagccagcgctaa
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