Xiphias gladius (swordfish): 120789246
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Entry
120789246 CDS
T07311
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xgl04990
]
120789246 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
xgl04990
]
Other domain-containing proteins
Patched domain-containing proteins
120789246 (ptchd4)
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GFIT
Motif
Pfam:
Patched
Sterol-sensing
DUF7041
Motif
Other DBs
NCBI-GeneID:
120789246
NCBI-ProteinID:
XP_039981769
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All DBs
Position
LG4:complement(21444096..21492353)
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AA seq
865 aa
AA seq
DB search
MCFIGGNGAYASRILWRMLRQVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPETDLEVLVAPTHSLAKIERSLANSLFPIDQSKHKLYSDLHTPGRYGRLILLAKS
GGNILELADQVLQVHKQVLDLRDGRVSFIGHQLGGVSFLPNSRDQQVKFARAVQITYYLR
NHGPLVQDAIAEHWENEFYALVRRLSTSEAPHGPDQLHIQSLTSFSLWRDFHQTGMLAKG
EVLVSLVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLL
GIPFFAMGHGTKGVFELLAGWRRTRENLPFKERVADAFADVMVCYTMTSSLYIITFGMGA
SPFTNIESVKIFCQSMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYL
DRQPTWFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYA
SFSFMGCLQISDGSNIVNLLASNSPSVSYALTQQKYFSNYSPVIGFYIYEPIDYWNSTVQ
DHLKTLSHGFNKISWMDNFFHYLRVVNVSASTKSDFITILKGSFLRSPEYQHFTEDIIFS
KNRETDEYDIIASRLYLVARTTEKKREEVVELLEKLRPLMLINSIKFIAFNPTFVFMDRY
SSSVISPILTSGFSILTMLILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVGMDSI
SILCLIYTLNFAMDHCAPHLYTFVLATEHTRTQCIKLALEEHGAAILQNTSCFVIGIMPL
VFVPSNLTYTLFKCSLLTAGCTVLHCFIILPVFLTFFPPSKKRHKKKKRAKRKERERERE
REREREREEIECIEVRENPDHVTNV
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcatcggaggaaacggtgcatatgcaagcaggattttgtggaggatgctgcgg
caagtgattcacagagggctcaaggcttcgttctactggctgggcttgttcgttagcagg
caccctgttttcttccttactgtccctgcagtcctcaccataattttcggatctaccgtt
ctgagccgattcaagccggagacggacctggaggtgctagtcgccccgactcacagcctc
gccaagattgagcggagtctcgccaacagcctgtttcccatcgaccagtcgaagcacaag
ctctactcggatttgcacaccccgggcagatatggcaggctgatcctgctggccaagtcc
gggggaaacatcctagaactagctgaccaggtcctccaggttcacaagcaggtgctggat
ttacgcgatggccgtgtgtccttcattggccaccagctgggcggcgtgtccttcttgcca
aacagccgagaccagcaggtgaagttcgcccgcgctgtccagatcacctactacctccgt
aaccacggacccttggtacaggatgccatcgctgagcactgggagaatgagttctatgcc
ctggtcagacgtttgtccacatccgaggcaccccacgggcctgaccaacttcacatccag
tcgctcacctccttcagcctgtggcgggacttccaccagacgggcatgctcgccaagggg
gaggtgctggtcagtctggtgctggtactcctggccgccacaatctccagttccatgcga
gactgcctgaggggaaagccattcctgggcctcctgggcgtgctgaccatctgcattgcc
aatgtgacggctgcagggatcttctttatatcagatgggaaattcaactctacgctgctg
gggatcccattctttgccatgggccatggaaccaaaggagttttcgaactgctagcaggc
tggaggagaacgagggaaaaccttcccttcaaggaacgtgtggcggacgcttttgctgac
gtgatggtgtgctacaccatgaccagctcactctacatcatcaccttcggcatgggagct
agcccttttaccaacattgagtcagtgaaaattttctgccagagcatgtgtgtcgccata
ctggtcaactacttctacgttttttctttctatggctcctgcctggtgtttgccggacag
ctggagcagaaccgctatcacagtgttttctgttgtaaaatcccctcagtggagtatttg
gaccgccagcccacatggtttaaaactatgatgagtgacggccatgacctgtccacgcac
catgacagtgtcccataccagaatcacttcatacagcacttccttcgagagcactacaca
gagtggattaccaacacttatgtcaaaccctttgtggtgattctctatctcatctacgcc
tctttctcattcatgggatgcttacaaatcagtgatggatcaaatatcgtcaacctgctg
gctagtaactctccgagtgtttcgtatgctctgacccagcagaaatacttcagtaactac
agtcctgtgatcgggttttacatttacgagcccatcgattactggaactccacggtgcag
gaccaccttaagactctgagtcatggcttcaacaagatctcctggatggacaactttttc
cattacctgcgggtggtgaatgtgagtgcatcaaccaagagtgacttcatcaccatcctt
aaaggctctttcctgcgcagcccagagtaccagcacttcactgaggacatcatattctcc
aagaatcgtgagactgacgagtacgatattattgcctcacggttgtacttggtggcgcgg
acgactgagaagaagcgagaagaggtggttgagctattggaaaagcttcgtccattgatg
ctaatcaacagcatcaagttcattgccttcaatcccacatttgtgttcatggaccgctac
agctcctctgtaatctcacccattctcacctcaggcttcagcatactcactatgctcatt
ctcacttttttcctggtcatcaaccccttggggaacttctggctcatcctcacggttacg
tctgtagagctgggcgtcttgggtttgatgaccctctggaacgttggcatggacagcatc
tcaatcctgtgccttatttataccctcaacttcgccatggatcactgtgcaccacacctg
tacacctttgtgctggccacagagcacactaggacgcagtgcatcaagttagcactggag
gagcacggggctgccatcctgcagaacacatcctgctttgtgattgggatcatgcccctg
gtgtttgtgccttccaatctgacctacacactgttcaagtgctccctcctcactgcgggc
tgcactgtgctacactgcttcatcatcctgccagtcttcctgaccttcttcccgccatcc
aaaaagagacacaaaaaaaagaaacgggccaagcggaaagagcgggagagggagcgggaa
agagagagggaaagagaaagggaggagatagagtgcattgaagtcagggagaatcctgat
catgttacaaacgtctga
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