Xiphias gladius (swordfish): 120789286
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Entry
120789286 CDS
T07311
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120789286 (trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120789286 (trim54)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120789286 (trim54)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-B_box
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
zf-RING_2
DUF8512
TRIM_CC
Sina_RING
CoiA_N
DUF1421
FAM199X
Prok-RING_4
Aldedh
Zn_ribbon_FGT1_2
DAHL
Motif
Other DBs
NCBI-GeneID:
120789286
NCBI-ProteinID:
XP_039981843
LinkDB
All DBs
Position
LG4
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AA seq
371 aa
AA seq
DB search
MNFAPGFKFPSAGSSGPGAGSGATMENLEKQLICPVCLEMFSKPVVILPCQHNLCRKCAN
DIFQSANPLWQSRGSSGLVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYRQQ
ESSRLVNIKPEQQQQLQQLLMCEEHEEEKINIYCLSCQTPTCSMCKVFGRHKDCDVAPLG
SVYARQKTELSDGIAILVASNDHVQAVISQMEEMCRTVEENGLRQREQLVNHFDGLVAIL
EERKQELVGLISRQQDDKLRRVRALIRQHGDHLEAAVTLVESAIQSMEEPHMPLFIQSAK
VILEKMAAMARASDLERPELGYESMSHFGVDTDDLADMLRNIDFCSAVGDDEEEDPEEVG
EDPDLDFGCRY
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgctcctggcttcaagttcccatcggcaggcagttctgggcccggtgccggc
agcggagccaccatggagaacctggagaagcagctgatctgccccgtctgcctggagatg
ttctccaaacctgtggtcatcctgccctgccagcacaacctctgccgcaagtgtgccaac
gacatcttccagtcagcgaaccctctgtggcagtcccgcggctcctccggccttgttgcc
agcggcggccgattccgctgtccgtcgtgccgccacgaggtggtgctggaccggcacggg
gtctacggcctgcagagaaacctgctggtggagaacatcattgacatctacagacagcag
gagtcctccaggcttgtgaacattaagccggagcagcagcagcagctgcagcagctgctg
atgtgcgaggagcacgaggaggagaagatcaacatctactgcctgtcgtgtcagacgccg
acctgctccatgtgcaaagtgttcgggcgacacaaagactgcgacgtggccccgctcggc
agcgtctacgcgaggcagaagacggagctgagcgacgggatcgccatcttggtcgccagt
aacgaccacgtccaggcagtcatctctcagatggaagaaatgtgccgcaccgtagaggag
aacggcctgcgacagagagagcagctggtcaaccatttcgacggtctggtggccatcttg
gaggagcggaagcaggagctggtgggtctgatttccagacagcaggacgacaagctgagg
cgcgttcgagcgctcattcgccagcacggcgatcacctggaggccgcggtcacgctggtc
gagtcggccatacagtccatggaggagccgcacatgcctttgtttatacagagcgccaaa
gtcatactggagaaaatggcggcgatggcgcgggcctctgacctggagcgtccggagctg
ggttacgagagcatgagccacttcggggtcgataccgacgacctcgccgacatgttgagg
aacatcgacttctgctctgctgtgggagatgatgaagaagaggatcctgaagaagtggga
gaagatccagatcttgactttggctgcagatattaa
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integrated database retrieval system
