Xiphias gladius (swordfish): 120789295
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Entry
120789295 CDS
T07311
Symbol
pax1b
Name
(RefSeq) paired box protein Pax-1
KO
K09382
paired box protein 1/9
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120789295 (pax1b)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
120789295 (pax1b)
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Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_29
HTH_28
Motif
Other DBs
NCBI-GeneID:
120789295
NCBI-ProteinID:
XP_039981864
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Position
LG4:2704359..2715656
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AA seq
475 aa
AA seq
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MLGRGNKSRPACLRVTPETEKGAGFRGISFGSGSPRKLIHQKQAAEVQSFPSPRDADDEP
PVPGVNVLLDRSPAVQGAERRERSRRPEQSYGEVNQLGGVFVNGRPLPNPVRLRIVELAQ
LGMRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPAVVKSIRDYKQGD
PGIFAWEIRDRLLSDGVCDKYNVPSVSSISRILRNKIGTLSQPSQSERDSPAPGPLQYGH
VYPYSHYNGPAMTGTTGTRTGSGPSAHVGLRRNWPNILGIRAFVDPAALSGSNGHSAKVE
DWTGMTGMSSRPFPSGINGAEKINNQPDFKYPQQSSSSLSGYVSACAYSPPNQYGAYGGP
GANYMNTGHHWQPQSSGQTPCLTPSLTPSLTPGLSHPGSAAPLEAADFHIMTSFKLSQRE
DYLRPRDDAEGETRTTSVCLVLEDSRQTNLRFCLYWNRAPEEKKPPSLNWTHSRN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtcgaggaaacaagtcccgacccgcctgtctccgtgtgaccccagagaccgaa
aagggggctggttttcgagggatctcctttgggtcgggatccccacgaaagctgattcac
cagaagcaggcggcagaagtgcagagtttcccgtcgccacgagacgcggacgatgagccc
ccggtgccgggtgtgaacgtcctcctcgatcgttctccggccgtccagggggccgagaga
cgggagcggtcccgacgaccggagcagagctacggggaggtgaaccagctcggcggggtg
ttcgtgaacggccggccgctgccgaacccggtgcggctgcggatcgtggagctggcgcag
ctcggtatgcggccctgcgacatcagccgccagctgcgggtctcccacggctgcgtgtcc
aagatcctggcccgctacaacgagaccggctccatcctgcccggagccatcggcggcagc
aagccccgggtcaccacccccgccgtggtcaagagcatccgggactacaagcagggggac
ccgggcatcttcgcctgggagatccgggaccggctgctgtcggacggggtctgcgacaag
tacaacgtgccgtccgtcagctccatcagccgcatcctcaggaataagatcgggactctg
tcgcagccgagtcagtctgagagggacagtccggctccgggtccgctccagtacggacat
gtctacccgtactcccactacaacgggcccgcgatgaccgggaccaccgggaccaggacg
ggcagcggcccctccgcacacgtgggcctgcggcggaactggcccaacatcctgggcatc
cgggccttcgtggacccggcagctctgtccggctccaatggacactcggccaaagtggag
gactggaccggtatgaccggtatgagcagcaggccgttcccctctggaataaacggagcg
gagaaaatcaacaaccagccggacttcaaatacccacagcagtcctcatccagtctctct
ggttacgtctcggcttgtgcctactctccaccaaaccagtacggtgcgtacgggggtcca
ggggccaactacatgaacactgggcaccactggcagcctcagtcctccggtcagaccccc
tgcctaactcccagtctaactcccagtctgactcccggcctgtctcatcccggctctgcg
gcaccactggaggctgcggattttcacatcatgacatctttcaagctttctcaaagggaa
gactatcttcggcctcgtgacgacgccgagggggaaactcggacgacgtcggtctgtctg
gttttagaagactcgcggcaaactaacctccgcttctgcctctactggaaccgtgcacct
gaagaaaaaaaacccccctctctgaactggactcattccaggaattga
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