KEGG   Xiphias gladius (swordfish): 120789408
Entry
120789408         CDS       T07311                                 
Name
(RefSeq) zinc-binding protein A33-like
  KO
K12012  tripartite motif-containing protein 35
Organism
xgl  Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xgl04121]
    120789408
Ubiquitin system [BR:xgl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    120789408
SSDB
Motif
Pfam: zf-C3HC4 PRY zf-B_box zf-RING_UBOX zf-C3HC4_2 zf-C3HC4_4 zf-RING_2 zf-C3HC4_3 zf-Nse zf-RING_5 zf-rbx1 SPRY U-box Baculo_IE-1 zf-ANAPC11 zf-RING_6 zf-RING_10 FAM209 DUF4200
Other DBs
NCBI-GeneID: 120789408
NCBI-ProteinID: XP_039982040
LinkDB
Position
LG4:14135010..14139235
AA seq 461 aa
MAGNVSQSEADYTCPVCCDIFKDPVLLLCGHSFCKYCLKEWWRQSRLQACPVCKEIFPMA
QPPRNLALRNLSDTLRRERGQRATSGSKELCSLHSERLKLFCQDDQQLICVICRDAQKHK
KHNCVPVDEAAADLRTKLRVELMHLKSKLGSFKAQKVNCDKMARHIKLQAQQTERTIGEE
FQKLYRFLRAEEAARLDAVRKEATLKSEAMNIRIVNLDAEISSLADKIQTIDKEIKAEDY
SFMLNVKSTLERSKCKLSEPETPVGALIDEAKHQGKLLFAVWMKMKSIIKYTPVTLDPNT
SGPQLILSENLSHLSESKRAHRLPNNPEREGLFTVLCHESFSSGKHSWDVEVDGTWAAGV
ATRTKHKTSPRVWGIYAYGSNDYLFELTTDKSLDSISRDILPKKVRVQLDYDQGLLSFFD
LDRKALVHIIKHTFRDPVFPYFNATVKILPVDVSVRIRQPT
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggccggtaacgtgtcgcagtccgaggcggattacacgtgccccgtgtgctgtgatata
tttaaggatccagtgctcttgttgtgcggccacagcttctgcaagtactgtcttaaggag
tggtggagacaaagtagactccaggcgtgcccggtctgcaaggaaatatttccgatggct
cagcctccgcgtaatctggcgctaagaaacctgtctgacaccttgagacgagagaggggt
cagagagcgacctcaggatctaaggagctttgcagcctgcacagcgagaggctcaaactc
ttctgtcaggatgatcaacagctcatctgcgtgatttgtagggatgcacagaaacacaag
aaacacaactgcgtccccgtcgatgaagcagcagcagaccttaggaccaaactcagggtt
gagctgatgcatttaaaaagcaaactgggatcatttaaagcacaaaaagtcaactgtgat
aaaatggccagacacatcaagctccaggctcagcagacggagaggacaatcggagaggag
tttcagaagctttaccggttcctgagagcagaggaggctgccaggctagatgcggtgagg
aaggaggcgacactcaagagtgaggcgatgaacatcaggatcgttaatttggacgcggag
atctcctcgctcgcagacaaaatccaaaccatagacaaggagataaaagctgaggactac
tcattcatgctgaatgtcaaatccactttggagcggtcaaagtgcaaactctcagaacca
gagactccagtgggggccctgatcgatgaggccaaacatcaagggaaactgcttttcgca
gtctggatgaagatgaagagtataatcaaatacacccctgtaaccctggacccaaatacc
agtggcccacaactgattctgtcggagaatttgagtcatttgtcagagagtaagagggct
caccggcttcctaacaacccagagcgagaaggcctctttactgttctctgccacgaaagc
ttcagctccgggaaacacagctgggatgtggaggtggatggtacttgggccgctggtgtg
gctactagaaccaagcacaaaacctctccaagggtctggggcatttacgcgtatggttcc
aacgattatttgtttgaacttaccacagacaaatcattagattccatatcaagagatata
ttacccaaaaaggtcagagtgcagctagattacgaccaagggctactatcattttttgac
cttgacagaaaagcacttgtacacatcatcaaacacactttcagagatccagtttttcca
tattttaatgcgactgtaaaaatccttccagttgatgtgtcagtgaggataagacaaccc
acataa

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