Xiphias gladius (swordfish): 120789408
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Entry
120789408 CDS
T07311
Name
(RefSeq) zinc-binding protein A33-like
KO
K12012
tripartite motif-containing protein 35
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120789408
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120789408
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-Nse
zf-RING_5
zf-rbx1
SPRY
U-box
Baculo_IE-1
zf-ANAPC11
zf-RING_6
zf-RING_10
FAM209
DUF4200
Motif
Other DBs
NCBI-GeneID:
120789408
NCBI-ProteinID:
XP_039982040
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Position
LG4:14135010..14139235
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AA seq
461 aa
AA seq
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MAGNVSQSEADYTCPVCCDIFKDPVLLLCGHSFCKYCLKEWWRQSRLQACPVCKEIFPMA
QPPRNLALRNLSDTLRRERGQRATSGSKELCSLHSERLKLFCQDDQQLICVICRDAQKHK
KHNCVPVDEAAADLRTKLRVELMHLKSKLGSFKAQKVNCDKMARHIKLQAQQTERTIGEE
FQKLYRFLRAEEAARLDAVRKEATLKSEAMNIRIVNLDAEISSLADKIQTIDKEIKAEDY
SFMLNVKSTLERSKCKLSEPETPVGALIDEAKHQGKLLFAVWMKMKSIIKYTPVTLDPNT
SGPQLILSENLSHLSESKRAHRLPNNPEREGLFTVLCHESFSSGKHSWDVEVDGTWAAGV
ATRTKHKTSPRVWGIYAYGSNDYLFELTTDKSLDSISRDILPKKVRVQLDYDQGLLSFFD
LDRKALVHIIKHTFRDPVFPYFNATVKILPVDVSVRIRQPT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccggtaacgtgtcgcagtccgaggcggattacacgtgccccgtgtgctgtgatata
tttaaggatccagtgctcttgttgtgcggccacagcttctgcaagtactgtcttaaggag
tggtggagacaaagtagactccaggcgtgcccggtctgcaaggaaatatttccgatggct
cagcctccgcgtaatctggcgctaagaaacctgtctgacaccttgagacgagagaggggt
cagagagcgacctcaggatctaaggagctttgcagcctgcacagcgagaggctcaaactc
ttctgtcaggatgatcaacagctcatctgcgtgatttgtagggatgcacagaaacacaag
aaacacaactgcgtccccgtcgatgaagcagcagcagaccttaggaccaaactcagggtt
gagctgatgcatttaaaaagcaaactgggatcatttaaagcacaaaaagtcaactgtgat
aaaatggccagacacatcaagctccaggctcagcagacggagaggacaatcggagaggag
tttcagaagctttaccggttcctgagagcagaggaggctgccaggctagatgcggtgagg
aaggaggcgacactcaagagtgaggcgatgaacatcaggatcgttaatttggacgcggag
atctcctcgctcgcagacaaaatccaaaccatagacaaggagataaaagctgaggactac
tcattcatgctgaatgtcaaatccactttggagcggtcaaagtgcaaactctcagaacca
gagactccagtgggggccctgatcgatgaggccaaacatcaagggaaactgcttttcgca
gtctggatgaagatgaagagtataatcaaatacacccctgtaaccctggacccaaatacc
agtggcccacaactgattctgtcggagaatttgagtcatttgtcagagagtaagagggct
caccggcttcctaacaacccagagcgagaaggcctctttactgttctctgccacgaaagc
ttcagctccgggaaacacagctgggatgtggaggtggatggtacttgggccgctggtgtg
gctactagaaccaagcacaaaacctctccaagggtctggggcatttacgcgtatggttcc
aacgattatttgtttgaacttaccacagacaaatcattagattccatatcaagagatata
ttacccaaaaaggtcagagtgcagctagattacgaccaagggctactatcattttttgac
cttgacagaaaagcacttgtacacatcatcaaacacactttcagagatccagtttttcca
tattttaatgcgactgtaaaaatccttccagttgatgtgtcagtgaggataagacaaccc
acataa
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