Xiphias gladius (swordfish): 120789445
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Entry
120789445 CDS
T07311
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xgl03400
]
120789445
DNA repair and recombination proteins [BR:
xgl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120789445
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
120789445
NCBI-ProteinID:
XP_039982106
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Position
LG4:10831745..10841204
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AA seq
942 aa
AA seq
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MGVHDLWSIVETVRESVPLYSLSGKTLAVDLSLWVCEAQHVQAMMGRVTKPHLRNLFFRV
SSLTLMGVKLVFVMEGEAPKLKAETMSKRTETRFGGFKKASAPRSTTNTSRGRFRAVLRE
CAEMLDYLGVPWVTAAGEAEAMCAYLDSQGLVDGCITNDGDAFLYGARTVYRNFNMNSKD
PQVDCYRTSRVQTELHLSRENLVGLAILLGCDYIPKGVPGVGKEQALKLIKTLRGQTLLQ
RFIQWKEDNAGVSEGVVKKVPHCHVCRHPGSAKGHERGGCVLCGSERFCQPQDFDYQCPC
DWHHYEQTRQALSFEANIRKKTLASQHFPFTEIISEFLISKDKPVSHFRRRQPNMLLMQK
FAYDKMEWPKHYTSEKVLVLMTYAELMNRKHGREMSSQIKPLRISKPRVRNAVACFEVIW
STPEHYVFPEDRPAEGQHEVRTVEEECLFRVAFPEMVESYLRDKALAEENKTKKKKPKSK
KEKQSDVSDGISDLLAQMSLQSFSSANANIRLQTLLPTISNTEKPEVVNLDTPVNDKQHS
NSKEDHSGLVNCPNTPLSPDSEAVASPSVSAVVDALHLSDIDWDALSFTSSPPPQATTNH
TTEPRLNISTDRDVKETEGKNAKQKASRDVKQADSRSAPELCYTECPLRDRVLMRNTAKA
VNQREVHNDVVSKQLNYGLASLEHISPHSSNLKPNGQITSKGGSDSTLTGKESDVNKKGP
LSVKSQCVKNKAATETHTSKRPLIPGVQNQCKEKDECNGSQKPPQKYKFVRTAISLSAAP
SQRCHSDPGQSDRDRNMPQTTKKSVCYSLCSSSEDSDAENQQFGAQTKAKIKPMKKIKDS
VITDFPLKPVSGPKTTKQTIKTTHCPQPLRPKSQGHGTDVEIKRTPVSNKSKYQDVPPAN
VDDDVLSQTPASPVAVLDSDDSVICSESPLPLAERLRLKFLK
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgcacgatctgtggtctatcgtggagacggttcgtgagtcggtgccgctgtac
agtttgagcggaaagacgctggcagtcgacctgagcttatgggtgtgcgaggctcagcat
gtccaagcaatgatggggagagttaccaagccccacctgaggaatttatttttcagggtc
tcctccctcacacttatgggggtaaagctcgtctttgtcatggaaggagaagcccctaag
cttaaagcagagaccatgagcaagaggacagaaacaagatttggaggattcaaaaaggct
tctgcccccaggtctacaacaaacaccagcagagggcgcttcagagctgtactcagagag
tgcgcagagatgctggactacctgggtgtgccatgggtgaccgcggctggggaggctgag
gccatgtgcgcttacttggattcacagggcctggtggatggctgcatcaccaatgatgga
gatgcattcctgtatggagccagaactgtctacaggaacttcaatatgaatagtaaagac
cctcaggtggactgttataggacctctcgagtgcaaacagagttacatctgtccagagag
aaccttgttggtctggccatcctccttggctgtgattatattcctaagggtgtaccaggt
gttggtaaagagcaagctcttaaacttatcaagacactgagaggacaaacacttctgcag
aggttcatccagtggaaggaggataatgcaggtgtatctgagggggtcgtaaaaaaagtt
cctcactgccacgtatgtcgacatcctggatcagcgaagggacatgagcgtggcggctgt
gtgctttgcggcagtgaacgtttctgtcaacctcaggattttgattaccagtgcccctgt
gactggcaccactatgaacagacccgccaggctttgtcttttgaggcaaatatcaggaag
aaaacactggcaagtcaacatttccctttcacagagatcatcagtgagtttctgatttcc
aaagataagcctgtgtcacatttcaggaggagacagccaaatatgctgttgatgcagaaa
tttgcctatgacaagatggagtggccgaagcactacaccagtgaaaaggttttagtcttg
atgacctacgcagagttgatgaacaggaaacatggaagagaaatgtcctcccaaatcaag
cccctaagaatatcgaaaccaagagtgagaaatgccgtcgcttgcttcgaagtcatctgg
agcacaccagaacattacgtgtttcctgaggatcggcctgcagagggtcaacatgaggtg
aggacagtagaggaagagtgtctcttccgtgtggccttcccagagatggtggagagctac
ctgagagacaaggctctggctgaagaaaacaagaccaaaaaaaagaaaccaaagagtaaa
aaggagaagcaatctgatgtctctgatggcatttcggacctcttggctcagatgagcctt
cagagcttctcttcagcgaatgctaacattcgactacaaacgctgctccctaccatttca
aacacagaaaaaccagaagtggtgaatttggacactccagtgaacgataaacagcatagt
aactcaaaagaagaccacagcggtctggttaactgccccaacactcctctgtctcctgac
tcagaggctgttgcttcaccatctgtctctgctgttgttgatgctctacacctgagtgat
attgactgggatgctctgtccttcacttcctctccacctccacaagccactacgaaccac
accaccgagcccaggctgaatatatccacagaccgagatgtcaaggaaacagagggcaaa
aacgccaagcagaaagcctcaagagatgtcaaacaagcagactccagatctgctccagag
ctgtgttacaccgagtgtccgctacgggacagggtgctcatgaggaatacagccaaagct
gtaaaccagagggaggtacacaatgatgtggtctcaaaacaattaaattatgggttagcc
tctctcgaacacatttctcctcacagctccaacttaaaaccaaatggacaaataaccagt
aaaggtggcagtgacagtacattgacagggaaggaatctgatgttaacaaaaaaggacca
ctcagtgttaaaagccagtgtgtaaagaataaggcagcaacagaaactcacacttcgaaa
cgaccattaattcctggagtacagaatcagtgtaaggaaaaggacgaatgtaatggttcc
cagaagcctcctcagaaatataaatttgtcaggacagccatttcattatctgctgcccca
tcacagaggtgccactctgacccaggtcaaagtgacagggacaggaacatgccacagacc
accaagaagagtgtgtgttacagcttgtgttcatccagcgaggacagtgacgcagagaac
cagcagtttggagctcaaacaaaggctaagataaagcccatgaaaaagatcaaggacagc
gtcattacagacttccccctgaaaccagtttctgggcctaaaacaaccaaacaaacaata
aaaacgactcattgcccccagccattacgaccaaagtctcagggacacggtacagatgtt
gagataaaaagaacacctgtatcaaacaaaagcaaataccaggatgtcccgccagctaat
gtggacgacgatgtgctctctcagactccagcttcacctgtcgctgtcttagatagtgat
gattcagtgatttgcagtgagagtccactgccactggctgagagactgagactgaaattc
ctgaagtga
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